Branchiostoma floridae (Florida lancelet): 118414962
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Entry
118414962 CDS
T01074
Name
(RefSeq) spastin-like isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bfo04131
]
118414962
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
bfo04812
]
118414962
Enzymes [BR:
bfo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
118414962
Membrane trafficking [BR:
bfo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
118414962
Cytoskeleton proteins [BR:
bfo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
118414962
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
Vps4_C
TIP49
AAA_5
MIT
AAA_22
Mg_chelatase
AAA_16
AAA_14
IstB_IS21
NPHP3_N
AAA_2
MP_p6
DUF815
RNA_helicase
nSTAND3
AAA_33
CobT
AAA_24
Motif
Other DBs
NCBI-GeneID:
118414962
NCBI-ProteinID:
XP_035675204
UniProt:
A0A9J7L305
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Position
1:6908490..6927515
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AA seq
624 aa
AA seq
DB search
MRPRKGSASKSFTGTPKKRPKPPEKKQSPHKKNLHIAAYPLIVLFNLISHLVFQIWLFFT
FVYRQVLKRRARNTNQAARDRVDTMSGEKGTGDPALTRQRAYQKKAFEFISRALKIDEEN
SGQKHQAIDLYRKGIAELEKGIAVECRGHGEEYDRARKLREKMLTNLGMARDRLDLLETV
LASEDTSECDKPSRHASESDKSATATSESDKPLGGTDRADKSSTDARASDTHPEGNSSTL
ESGVTAPVPKKVGPMANKSSTLPRASRVHSYGGSGSSKSHSPQPLRKKSLQSTANRENRA
PGKTTTPARGSPRVTGPNKKRLASLKNVDSKLANIILDQVIDSAPSVNWDDIAGQDAAKQ
ALQEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVASESNATFFNISASTLT
SKWVGEGEKLVKALFSVARELQPSIIFMDEIDSLLCERREGEHDASRRLKTEFLLEFDGV
HSGNDDRILVMGATNRPQELDDAVLRRFAKRVYVQLPELETRVVIMSRLLRKHHNPLNQK
ELQNLARQTEGYSGSDLTNLAKDAALGPIRELDPAQVKSMPADKIRNIRYSDFVDSLKRI
RRSVPQNSLSSFEQWNRDYGDMST
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgcgacctcgaaaaggtagtgcgagcaagagtttcactggcacgccgaaaaagcgtccg
aaaccacctgagaagaagcagtcacctcacaagaagaatcttcacatcgccgcctaccct
ttgattgttcttttcaacctcattagtcatcttgtgttccaaatttggttgttttttacc
ttcgtttaccggcaagtgctgaaacgacgggcgcggaatacaaaccaggcagctcgggac
agagtcgacaccatgagcggggagaaaggcacgggagacccggcactcaccaggcagaga
gcttaccagaaaaaggctttcgagttcatctctcgagcgctgaagatcgatgaagaaaac
tcaggacagaagcatcaggccatcgacctatacagaaagggtatcgctgagttggagaag
ggcattgcagtggagtgcagaggccatggtgaggaatacgatcgagccagaaaactccga
gagaagatgctgaccaacctgggcatggccagggatcgcttagacctgctagagactgtg
cttgcctcagaggataccagtgagtgtgataaaccctccagacatgccagcgagtctgat
aaatctgccacagccacaagtgagtctgataaaccattaggaggcacagacagggctgat
aaatcctccacagatgcccgtgcatctgacacacatccagaaggcaacagtagcacatta
gagtctggagtgactgcacctgtgcctaagaaggtgggacccatggccaacaagagctcg
actctgcccagagccagcagggtgcacagctacggggggagtggcagcagtaaaagtcac
agccctcagcctctgaggaaaaagtcgctccagtcaacagctaacagggaaaaccgggcc
cccgggaagaccacaactcctgcacgtgggagtccccgagtcacgggacccaacaagaag
agactagccagcctgaaaaatgtggactccaaactggcaaacatcatcctggatcaggtc
attgacagtgctccctccgtgaattgggatgatattgctgggcaagatgcagcaaagcag
gccttgcaggagattgtcattttaccatccttaaggccagagctgtttacaggcctgagg
gcccctgctcgtgggctcctgctcttcggaccaccaggcaacggcaagaccatgctggcg
aaggctgtggccagtgaatccaatgcaacattcttcaacattagcgcttccacattaaca
tctaaatgggttggagagggagagaagctggtgaaggctctgttttctgtggccagagaa
ctgcaaccttctatcatcttcatggatgagatcgactccttactgtgtgagagaagggag
ggtgaacacgacgccagcaggaggctcaaaacagagtttctcttggagtttgatggggtg
cacagtgggaacgatgatcgaatccttgtgatgggtgcaactaaccgaccacaggagctg
gacgacgctgtcctcaggaggtttgctaaaagggtctacgtgcagctgccggagctggag
accagagttgttatcatgtccagactgctacggaagcaccacaatcccctcaaccaaaaa
gagttgcagaacttagcaaggcaaactgaaggctactcaggaagtgacctgacaaactta
gccaaggatgcagcactaggacccatcagagaactggaccctgcccaagtgaaatccatg
ccagcagacaagatccgtaacataagatactcagactttgttgactccctgaagagaata
cgtcgcagtgtacctcagaactctctgtcatcctttgagcagtggaacagggactatgga
gacatgtcaacctag
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