KEGG   Branchiostoma floridae (Florida lancelet): 118414962
Entry
118414962         CDS       T01074                                 
Name
(RefSeq) spastin-like isoform X1
  KO
K13254  spastin [EC:5.6.1.1]
Organism
bfo  Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:bfo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:bfo04131]
    118414962
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:bfo04812]
    118414962
Enzymes [BR:bfo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.1  microtubule-severing ATPase
     118414962
Membrane trafficking [BR:bfo04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Others
   Others
    118414962
Cytoskeleton proteins [BR:bfo04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     118414962
SSDB
Motif
Pfam: AAA AAA_lid_3 RuvB_N Vps4_C TIP49 AAA_5 MIT AAA_22 Mg_chelatase AAA_16 AAA_14 IstB_IS21 NPHP3_N AAA_2 MP_p6 DUF815 RNA_helicase nSTAND3 AAA_33 CobT AAA_24
Other DBs
NCBI-GeneID: 118414962
NCBI-ProteinID: XP_035675204
UniProt: A0A9J7L305
LinkDB
Position
1:6908490..6927515
AA seq 624 aa
MRPRKGSASKSFTGTPKKRPKPPEKKQSPHKKNLHIAAYPLIVLFNLISHLVFQIWLFFT
FVYRQVLKRRARNTNQAARDRVDTMSGEKGTGDPALTRQRAYQKKAFEFISRALKIDEEN
SGQKHQAIDLYRKGIAELEKGIAVECRGHGEEYDRARKLREKMLTNLGMARDRLDLLETV
LASEDTSECDKPSRHASESDKSATATSESDKPLGGTDRADKSSTDARASDTHPEGNSSTL
ESGVTAPVPKKVGPMANKSSTLPRASRVHSYGGSGSSKSHSPQPLRKKSLQSTANRENRA
PGKTTTPARGSPRVTGPNKKRLASLKNVDSKLANIILDQVIDSAPSVNWDDIAGQDAAKQ
ALQEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVASESNATFFNISASTLT
SKWVGEGEKLVKALFSVARELQPSIIFMDEIDSLLCERREGEHDASRRLKTEFLLEFDGV
HSGNDDRILVMGATNRPQELDDAVLRRFAKRVYVQLPELETRVVIMSRLLRKHHNPLNQK
ELQNLARQTEGYSGSDLTNLAKDAALGPIRELDPAQVKSMPADKIRNIRYSDFVDSLKRI
RRSVPQNSLSSFEQWNRDYGDMST
NT seq 1875 nt   +upstreamnt  +downstreamnt
atgcgacctcgaaaaggtagtgcgagcaagagtttcactggcacgccgaaaaagcgtccg
aaaccacctgagaagaagcagtcacctcacaagaagaatcttcacatcgccgcctaccct
ttgattgttcttttcaacctcattagtcatcttgtgttccaaatttggttgttttttacc
ttcgtttaccggcaagtgctgaaacgacgggcgcggaatacaaaccaggcagctcgggac
agagtcgacaccatgagcggggagaaaggcacgggagacccggcactcaccaggcagaga
gcttaccagaaaaaggctttcgagttcatctctcgagcgctgaagatcgatgaagaaaac
tcaggacagaagcatcaggccatcgacctatacagaaagggtatcgctgagttggagaag
ggcattgcagtggagtgcagaggccatggtgaggaatacgatcgagccagaaaactccga
gagaagatgctgaccaacctgggcatggccagggatcgcttagacctgctagagactgtg
cttgcctcagaggataccagtgagtgtgataaaccctccagacatgccagcgagtctgat
aaatctgccacagccacaagtgagtctgataaaccattaggaggcacagacagggctgat
aaatcctccacagatgcccgtgcatctgacacacatccagaaggcaacagtagcacatta
gagtctggagtgactgcacctgtgcctaagaaggtgggacccatggccaacaagagctcg
actctgcccagagccagcagggtgcacagctacggggggagtggcagcagtaaaagtcac
agccctcagcctctgaggaaaaagtcgctccagtcaacagctaacagggaaaaccgggcc
cccgggaagaccacaactcctgcacgtgggagtccccgagtcacgggacccaacaagaag
agactagccagcctgaaaaatgtggactccaaactggcaaacatcatcctggatcaggtc
attgacagtgctccctccgtgaattgggatgatattgctgggcaagatgcagcaaagcag
gccttgcaggagattgtcattttaccatccttaaggccagagctgtttacaggcctgagg
gcccctgctcgtgggctcctgctcttcggaccaccaggcaacggcaagaccatgctggcg
aaggctgtggccagtgaatccaatgcaacattcttcaacattagcgcttccacattaaca
tctaaatgggttggagagggagagaagctggtgaaggctctgttttctgtggccagagaa
ctgcaaccttctatcatcttcatggatgagatcgactccttactgtgtgagagaagggag
ggtgaacacgacgccagcaggaggctcaaaacagagtttctcttggagtttgatggggtg
cacagtgggaacgatgatcgaatccttgtgatgggtgcaactaaccgaccacaggagctg
gacgacgctgtcctcaggaggtttgctaaaagggtctacgtgcagctgccggagctggag
accagagttgttatcatgtccagactgctacggaagcaccacaatcccctcaaccaaaaa
gagttgcagaacttagcaaggcaaactgaaggctactcaggaagtgacctgacaaactta
gccaaggatgcagcactaggacccatcagagaactggaccctgcccaagtgaaatccatg
ccagcagacaagatccgtaacataagatactcagactttgttgactccctgaagagaata
cgtcgcagtgtacctcagaactctctgtcatcctttgagcagtggaacagggactatgga
gacatgtcaacctag

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