Branchiostoma floridae (Florida lancelet): 118414974
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Entry
118414974 CDS
T01074
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1-like isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bfo04131
]
118414974
Membrane trafficking [BR:
bfo04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
118414974
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_MalT
TPR_7
TPR_8
TPR_1
TPR_2
TPR_10
SH3_1
TPR_21
TPR_NPHP3
SH3_9
Motif
Other DBs
NCBI-GeneID:
118414974
NCBI-ProteinID:
XP_035675228
UniProt:
A0A9J7L3H1
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All DBs
Position
4:16762622..16785104
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AA seq
1383 aa
AA seq
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MLPRRKSLPRSWDPRPLLSDLRRSLRSKMASSIIRRRRESNMAAQAATTDDIQDKRMRLR
DNRPKSFHSGAHPGEALGLKPGQPLSVEDIQALKAALQGGRPATFHPGMLSRNKSAEDGK
PTRVKEITAKLRPYLDSGEMPPVSVYKELKDRLLNEDVMKRLAEVFQLISVLLVKTDANT
TSLRLRFSTLDNAHALWTHSALGLLEPLIETVLTSPMRSSVGMEDLRMRVDVEEEDYLPV
FETLSEGDYFVRVKDSKGGPNPQEDIQTRQGEVLRVVEADDVAQLKVESLGGERTGSILR
DNVAHVGPFQDDMLKRCTENRKDPESVPVISEANLQGMVPGTYVVEEDFEAKAGDEISVP
SGTRVVVAMEDRPGPLVDWCLVRCPDESKQGFLPRSCLKLEEADTVDPTSPAMEKTDPFG
SLASGNNGDTHSIGAVSRAVLDWYRQKHYDSGLKSCADAAVASLKALTSRETTRSDSRRS
SLGDLAASQENKDGGEMRPGATAILTPAANAGHSQTSAAGSPVQEENEERALEENGHPTT
SEGDKENVHYLRSILKSAEENEDLKAVSDNLHKLLHVLIREDGEESLAESAQCATKLQEV
AVKLEDATTQVAAEIFLAQISRQKGDFAKARDHFHTATTYQFETKGMDKGLLARLYCEMG
SLCAEIGDWNGRNVSLEKALSLLNHIVPGKSDDMLHDNTKTVIHLYEYYLFKAILANDSK
TENKMCRQLFHLYGQANTLRWSTMCAERALLINKAEERPTLGDFYNLHTLYTHEGKWCSA
SMCLKKVLEYETTNPSLYLKLADLCIKIGASSTRKDADRKVVPSETRKYFQRILDLTAGS
ENRSLQFEAHTGLFAVNGGKNDIAAAVHHLEEAMSLSQELGMVTERLELLTVAGSFYQER
CHEGKVATSKLEEALSLANQTKSELGGGIVCSKLGLVLQWQGYYKQAEGYLKRALLLSLR
TNNKVNELISYANIANLYKDWKNFYIAEKCLRKALLIDVTAEDEKLAFNCYADIYAALGN
IYLFHLDDKLAAKCYYEMALAVALWNSDKRGQMHLANFLGNCQGDLNDGQEDQAPKYFQF
ALPLAVELRERSVEGILRARLGEMHLKAGNHQAALSHTKDSLGIFIDLDDKKNEARTWKA
TGDIYSSMESYELADMYYQKANIIATDIGDLEEQWTVCQALGNLYAYSMDEHGRAVNFFQ
QTVLPLAEKSGDTNKEILAHNWLTHLLHKVNRYDDAITHAQRAWRLSADVSDPLSERVAC
LRLARLHLCQEQYELAEHYFLQALSLTHGVFVEDVGCRYYLNLYSTLADITLNHMKDARD
AATYYEIALGLAMHGDFKKKEMYVLTQLAKIYHTQLNDKELSLEFYRRARVLATELRQSS
GSM
NT seq
4152 nt
NT seq
+upstream
nt +downstream
nt
atgttgccccgtaggaaaagtttaccgcgcagttgggacccacgcccactgctctcagac
ctacggcggtctctcaggtccaagatggcgtcctccataataagacggcgaagagaatcc
aacatggcggcacaagcagccaccactgacgacatccaggacaagaggatgcgcctgcgc
gacaacagaccgaaaagtttccactcgggagcccaccctggagaggctcttggtctaaag
ccaggacagccgctgtcggtggaggacatccaggcactgaaggccgctctacagggaggc
aggcctgccactttccacccgggaatgctctctcggaacaagagtgctgaagacgggaag
ccaacaagagtgaaggaaataaccgccaagctgcggccgtacttggacagtggtgagatg
cccccagtgtctgtctacaaggagctaaaggacaggctgctgaacgaagacgtgatgaag
cgtctagccgaagtgttccagctgatctccgtgttgctagtgaagactgacgctaacacc
acaagtctcagactccgattcagcaccttggacaacgcgcacgcgctctggacacacagc
gcgctggggctgctggaaccgctcatagaaacggtgctgacgtcaccaatgaggtccagt
gtcggcatggaagatctgcgcatgcgtgttgacgtcgaggaagaggactaccttcctgta
ttcgaaaccttgtcagaaggtgactactttgtgcgggtgaaagacagcaaaggcggcccg
aatccccaagaggacattcaaactcgacaaggggaagttctacgggtggtggaggccgac
gacgtagcgcagctcaaggtggagtcgctaggaggcgagcggaccggctcgatcctgcga
gacaacgtagctcacgtagggccgttccaagatgacatgctcaagcggtgtacagagaac
agaaaggacccagagtccgttccagtcatcagtgaggcaaatctccaagggatggtcccg
ggaacctacgtggttgaggaagactttgaggctaaggctggtgatgagatcagcgtaccg
agtggcacacgagtcgtcgtcgcaatggaagacagacccggcccgctcgtcgactggtgt
ctggtccggtgtccagatgagtctaaacaaggattcctgcccagatcctgcctgaaactg
gaggaggcagataccgtcgacccgacatccccagccatggagaaaacagatcccttcggt
tccctggccagcggaaacaacggcgatacccactccatcggcgccgtcagtcgagctgtc
ctggactggtatcgacagaaacattatgacagtggacttaaaagttgcgcagacgctgct
gtggcttcactcaaagctttgacatccagagagacgacacgaagcgacagcagaaggtca
agtttgggtgaccttgcagctagtcaggagaacaaagatggcggtgagatgcggcctgga
gcaaccgccatcttgactccagctgcgaatgctggtcactcgcaaacaagtgctgcagga
tcgccagtgcaggaagagaatgaagaacgcgcactcgaggaaaacgggcaccccaccacg
tccgagggagacaaggagaacgtccactaccttaggagcatcctcaagtctgccgaagaa
aacgaagacctaaaggcggtttcagacaatcttcacaagctcctccatgtcttaattcgt
gaagacggagaagagagccttgctgagtcggctcagtgtgccacgaaactgcaagaggta
gctgttaaacttgaagacgctacaactcaggtggcggccgaaatatttttggcccagata
agtagacaaaaaggagactttgccaaagcaagagaccatttccatacagctacaacatat
cagtttgaaacaaaaggtatggataaggggttattggcgagactgtactgtgagatggga
agtctgtgcgcagaaattggtgactggaacgggcggaacgtttctttggaaaaagcgctg
tcgctgttgaaccatattgttcctggcaaatcagatgacatgctacatgacaataccaaa
accgtaatacacctgtatgagtattacttattcaaggccattctcgctaacgattccaag
accgagaacaaaatgtgtagacagcttttccacttgtacggccaagcgaacaccttgcgt
tggagcacgatgtgtgcggaacgtgccctactcatcaacaaggcagaagagagacccacg
ctgggggacttctacaatctccacactctgtatacccatgaagggaagtggtgctccgcc
tccatgtgtctcaaaaaagtcttggagtacgaaacaactaaccccagcttgtatctcaag
ctcgccgatctgtgcatcaagataggggccagcagtacacggaaagatgcagacaggaag
gtggttcccagcgaaacaaggaagtacttccagaggattcttgatctaacggccgggtcg
gaaaaccgctcgttgcagttcgaggcccacacgggtctctttgctgtgaacggggggaag
aacgacatcgctgccgccgtccaccatcttgaggaggccatgtcactcagtcaggagctg
ggaatggttaccgagcgtctcgaattgctgacggtcgcagggtctttctaccaagaacga
tgtcacgagggcaaggtggcaacatcgaaactagaggaagcactgtccttagccaaccaa
actaagtccgagctcgggggaggcatcgtgtgtagcaagctcgggctagtgttgcagtgg
cagggctactacaaacaagctgaggggtacctaaagagagcactgttactcagtctgagg
acgaacaacaaggttaatgaactcatatcgtacgctaacatagccaacctgtacaaagat
tggaagaacttctacatcgcagagaagtgtttacggaaggcccttctgatcgacgtaaca
gccgaagatgaaaagcttgctttcaactgttacgcagacatttacgctgcactgggaaac
atctacctcttccatctggacgataaactggcagcaaagtgttactacgaaatggcgctg
gccgttgccttgtggaatagcgacaaacgtgggcagatgcacctggccaacttcctgggg
aattgtcagggagatctcaacgatggccaggaggaccaagcacccaagtacttccagttt
gccttacctctagcagtggagctgagggagagatcagtggaggggatactcagggcgcga
ctgggggagatgcaccttaaggcgggcaaccaccaggcggcactcagccacacgaaggac
agcctcggcatattcatagacttggatgacaagaagaacgaagccaggacgtggaaggca
accggtgacatctacagcagtatggagtcatatgaactggccgatatgtactatcagaag
gcaaatatcatagcgacagacattggggatttggaggaacaatggactgtttgccaagct
ctcgggaatctctacgcctacagtatggatgagcacggaagagctgttaacttctttcaa
cagacagtcctccctttggccgagaagtctggagacactaacaaggaaatcctagctcac
aattggctgacccaccttctgcataaagttaacagatacgatgatgccatcacccacgca
cagcgcgcctggcggctcagtgcagacgtaagcgaccctctcagtgagcgcgtggcctgc
ctccgcctggctcgcctccatctgtgccaagaacaatacgagctcgccgagcattacttt
ctccaggctctctcgctcacccacggggtgttcgtggaagacgtgggttgcaggtactac
ctgaacttgtactcgactctagcggacatcactttgaatcacatgaaggacgcgagggac
gctgccacgtactacgagatcgcgctcgggcttgccatgcacggggactttaagaaaaag
gagatgtacgtgctgacacagttggccaagatctaccacacacagctcaatgataaggag
ctgtcactagagttctaccgtagagccagggttcttgctactgagctgagacaatcatca
ggatcgatgtga
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