Branchiostoma floridae (Florida lancelet): 118414978
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Entry
118414978 CDS
T01074
Name
(RefSeq) probable tRNA pseudouridine synthase 1 isoform X1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bfo03016
]
118414978
Enzymes [BR:
bfo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
118414978
Transfer RNA biogenesis [BR:
bfo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
118414978
Prokaryotic type
118414978
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
118414978
NCBI-ProteinID:
XP_035675238
UniProt:
A0A9J7L348
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Position
4:complement(16792682..16796323)
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AA seq
248 aa
AA seq
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MSPGAAVEPLSRLSRVFAVHKPVGWTSADVVRKIRAVLCTEMRSRGAQVKLRSIKLGHGG
TLDCRAAGVLVLGLGKGTKQLHNLLNTTQKRYIAEGLLGKATDTYDTGGEITEEKHFDHI
TEDTFRQTMDTFRGEQMQVAPIYSALKVGGERMSDRVRRGETVEPKPPRPVVVHSLELLS
FNPPHFQLAVTCGAGFYVRSLVHDLGHAVDSCAHMTSLCRVQQGLFTLQQALPLERWTLP
DIEAAVHI
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgtccccgggagcagctgtagagcccctgtcccggctgagccgggtgtttgcagttcac
aagcctgtgggatggacatctgcagatgtggtcaggaaaatccgggctgttctatgtaca
gagatgaggagtagaggtgcccaggtgaaacttcgctccatcaaactcggccatggaggc
acgctggactgcagggcagctggggttttagttctaggtctgggtaaaggaacaaagcag
cttcataaccttctcaacacaacacaaaagagatatatagcagagggactgctagggaag
gccacagatacctatgatactggtggagagatcacagaggagaaacattttgatcacatc
acagaagacaccttcaggcagaccatggacactttcagaggagaacaaatgcaggtggct
cccatctactcagcgctgaaggttgggggtgagcggatgtctgatcgggtgaggagaggg
gagacagtggaacccaagcctccacgtcctgtggttgtccactctctggaactcctcagt
ttcaacccccctcatttccaacttgcggtgacctgtggtgcaggcttctatgtgagatcc
cttgttcatgacctggggcatgctgttgacagctgtgcccacatgacatcactgtgtaga
gtacagcagggactattcacactgcagcaggcactaccactggagaggtggacactacca
gacatagaggcagctgtccacatttga
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