Branchiostoma floridae (Florida lancelet): 118414992
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Entry
118414992 CDS
T01074
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118414992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfo03019
]
118414992
03012 Translation factors [BR:
bfo03012
]
118414992
Messenger RNA biogenesis [BR:
bfo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
118414992
Translation factors [BR:
bfo03012
]
Eukaryotic type
Release factors
118414992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
118414992
NCBI-ProteinID:
XP_035675253
UniProt:
A0A9J7L357
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Position
4:complement(12775027..12785361)
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AA seq
438 aa
AA seq
DB search
MSGDSSDQADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVSKMLADEFGTA
SNIKSRVNRLSVLAAITSVQQRLKLYSKVPPNGLVVYCGTIVTDEGKEKKVNIDFEPFKP
INTSLYLCDNKFHTEALSALLTDDNKFGFIVMDGNGALFGTLCGNTREVLHKFTVDLPKK
HGRGGQSALRFARLRMEKRHNYVRKVAEVATQLFISNDKPNITGLILAGSADFKTELSQS
DMFDQRLQVKVLKLVDVSYGGENGFNQAIELSAEVLSNVKFIQEKKLIGKYFDEISQDTG
KYCFGVDDTLKALEMGAVETLIVWENLDYTRYVLKDHQKDEEKLLYLRPEQEKDKTYFTD
KDTGVELELMESMPLLEWFANNYKKFGATLEIITDRSQEGSQFCKGFGGIGGILRYRVDF
QGMEYQGDDFDFDDLDDY
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggggactcatcagaccaagccgacaggaatgtcgagatatggaagatcaagaaa
ctgatcaaaagtctggaagccgcgcgaggcaatggaaccagtatgatctccctcatcatc
cctccaaaggaccaaatctcacgagtctccaagatgttggctgatgaatttggcacagct
tctaacattaagagtcgagtcaacaggttgtctgtgctagcagctatcacctctgtacag
caaaggctcaagctgtattcaaaagtgcccccaaatggcctggtggtgtactgtggcacc
atcgtgacagatgaaggcaaagagaagaaagtcaacatcgattttgagccattcaagccc
atcaacacctctctgtacctctgtgacaacaaattccacacagaagccctgtcagcactg
ttgacagatgacaacaagtttggtttcattgtgatggacggtaatggagcactgtttggt
actctatgtggcaacaccagggaggtcttgcacaagttcacagtcgacttaccaaagaaa
cacggcagaggaggccagtctgcgctgcgttttgctcgtctgcgcatggagaagcggcac
aactacgtgcggaaggtagccgaggtagcgacccagctcttcatctcaaacgacaaacca
aacatcacaggactgatcctagctgggtcagcagacttcaaaacagagctcagccaatca
gacatgtttgatcagcgacttcaagtcaaggtgctgaagctggtggatgtgtcgtacgga
ggggagaacggcttcaaccaggccatcgagctgtccgctgaggttctgtccaacgtcaag
tttattcaggagaaaaaactcataggcaaatattttgacgagatctcacaggacacaggg
aagtactgttttggagtagatgacacactgaaggctctagaaatgggagctgtggagact
cttattgtctgggaaaacttggactatacaagatacgtactcaaggaccatcaaaaagat
gaggagaagctcctatacttgaggccagagcaggagaaagacaagacatactttacagac
aaagatacgggagttgagttagaattgatggagtctatgcctctgctagagtggttcgcc
aacaactacaagaagtttggtgccacgctggaaatcattacggaccgatcacaagagggc
tcacagttctgcaaggggttcggtggaatagggggtatcctgcgctaccgtgttgacttc
caggggatggaataccagggcgatgactttgactttgatgaccttgatgactattag
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