Branchiostoma floridae (Florida lancelet): 118415004
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Entry
118415004 CDS
T01074
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4-like
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bfo04121
]
118415004
Enzymes [BR:
bfo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118415004
Ubiquitin system [BR:
bfo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118415004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_4
zf-RING_16
zf-rbx1
Rtf2
Prok-RING_4
TRAF3_RING
DUF1272
zf-ANAPC11
zf-C3HC4_4
Zn_ribbon_6
zf-Nse
nsP3_ZBD
FYVE
Motif
Other DBs
NCBI-GeneID:
118415004
NCBI-ProteinID:
XP_035675264
UniProt:
A0A9J7L336
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All DBs
Position
4:complement(20807951..20811925)
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AA seq
207 aa
AA seq
DB search
MSLRRRSLRLRSGLREERRRMPRPRTRGVARGVGSQQEPIDVEDAPAIVDLTSDHHDADD
DVVVCHVNDEVVDLTRPHHAQPNNSMLPLYLNGRQHQGQLQLDTEVLVSDDEVTIESERL
PGPRLLDLFRDEAPGPSTSASSPPKTISCPVCLDDERQIRVTGRRLMSTVCGHVFCESCL
KEALQTQKKCPNCRKKLTVKQIHPIFI
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgagacgtcggtccttgcgacttcgtagtggtttgcgagaagaaagaagaagg
atgccccgcccgcggacccgaggcgtagcgagaggtgtgggctctcagcaggagcctatt
gatgtggaagatgcacctgccatagtagacttgaccagtgatcaccatgatgctgatgat
gatgttgtagtctgtcatgtcaatgacgaagtggttgacttaacgcgacctcaccacgca
cagcccaacaactccatgttgccactatacctaaatggccggcagcaccaaggacagctt
cagttggacacagaagtgttagttagcgatgacgaggtcacgatagaatctgagcgactc
cctggtcccaggctcctggacttgtttcgtgatgaagccccaggaccatcgacaagtgct
agttccccaccaaagacaatttcctgtcccgtgtgcctagacgacgagagacagatccgc
gttacaggtcgtaggctgatgtcaactgtgtgtggacatgttttctgtgagtcctgcttg
aaggaagctttgcagacacaaaagaaatgtcccaactgtaggaagaagttaactgtgaaa
cagatccatcccatcttcatataa
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