Branchiostoma floridae (Florida lancelet): 118415165
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Entry
118415165 CDS
T01074
Name
(RefSeq) PDZ and LIM domain protein 3-like isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118415165
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
bfo04990
]
118415165
Domain-containing proteins not elsewhere classified [BR:
bfo04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
118415165
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
118415165
NCBI-ProteinID:
XP_035675439
UniProt:
A0A9J7MQM9
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All DBs
Position
5:2128208..2156090
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AA seq
323 aa
AA seq
DB search
MPSGQQYQVTLPGPAPWGFRLTGGSDFNLPLTIYKVTPGSLAAQANVNPGDVVLRIGSCI
ADTLTYSEANTIIKANYGALELILVRGDGTVRPLPPPPTGPLSRTTQGQPASAPGGGPAP
GGGPAPGGGPATAGGGPAPGGDLAADSFDIFSGMPSRPRDPKYFLDEVEHGKLLQKKIYN
KEQGINDDPVPTLPSQGFSLDPCVDVGAIKRAGERGLGQPATPLEIEAGGKKIIHAQYDT
PLGLYSAEVAHDTLEGQLAELIGADGTGRDAGALYQMIQEEAARKARMQPRVAPPPPPEE
PSGPGVYQAQSRSFRILQKMTEN
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccggccagcaataccaggttactctaccaggacccgctccctggggcttccgt
ttaacgggtggaagtgatttcaacttaccgctgaccatctataaggtaactcctggaagt
cttgctgcccaagcaaacgtcaatcctggagatgtcgtactgaggatcggatcctgtata
gcggatacactgacatatagcgaggcaaacaccatcatcaaggccaactacggagctctc
gagcttattctcgtcagaggggatggcacagtgagaccgttgccaccacccccgaccgga
cctttatctcgcacaacacaaggacagccagcgagcgcccccgggggaggtcccgccccc
ggagggggtcccgcccctggaggaggtcccgctaccgccgggggaggtcccgcccctgga
ggagatctggcagccgacagctttgatatattctctggtatgccgtcaagacccagagat
cccaaatattttcttgatgaagttgaacacgggaaactactccaaaagaagatttataac
aaagagcaaggcatcaacgacgatcctgttccaactcttcctagtcaaggtttcagtctg
gatccgtgtgtggacgtaggtgccatcaagcgtgccggcgagcgcggtctgggccaacct
gcgacgcccctagaaattgaagctggcggcaagaagatcattcacgctcagtatgacaca
cccctgggcttgtactccgcggaagtcgctcatgacacgctggaggggcagcttgccgaa
ctgattggtgccgatggaacagggcgcgatgcaggtgccctgtaccagatgatccaggag
gaggcggcgcggaaagcccgcatgcagccccgtgtggcgcccccgcccccgcccgaggag
cccagcggtcccggcgtctaccaggcccagtcaaggtccttccgcatactgcagaagatg
actgagaattaa
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