Branchiostoma floridae (Florida lancelet): 118415247
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Entry
118415247 CDS
T01074
Name
(RefSeq) THO complex subunit 7 homolog isoform X1
KO
K13176
THO complex subunit 7
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03013
Nucleocytoplasmic transport
bfo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118415247
09122 Translation
03013 Nucleocytoplasmic transport
118415247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfo03019
]
118415247
03041 Spliceosome [BR:
bfo03041
]
118415247
Messenger RNA biogenesis [BR:
bfo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
118415247
Spliceosome [BR:
bfo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
118415247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC7
FapA
Sec8_N
OVT1
CCDC93_CC
NET2A_C
AAA_23
RasGAP_C
Gtr1_RagA
SNARE
DASH_Dad2
V_ATPase_I
ATG16
APG6_N
FemAB
Motif
Other DBs
NCBI-GeneID:
118415247
NCBI-ProteinID:
XP_035675577
UniProt:
A0A9J7L3R5
LinkDB
All DBs
Position
5:29349167..29402402
Genome browser
AA seq
202 aa
AA seq
DB search
MAASMSDDDIIRKRLLIDGDGIGDDKRISTLMKTFMKWCNAPGSDEESSATYQRMLAQLA
QCEHAMEKTQLIHGMNTHEINNYEQLYTDIEQSIEDAHTKIGDCKQELQHAKRVRKNRQE
YDALAKVIQQHPDRQQTMRRLEELQKELKTLKDSREGLEAKMEMRQKQFHVLVTSIHELQ
AMLEEDEKDEDEEEQMETGSST
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttccatgtcagacgatgacatcatccgcaagcggctgctgattgacggggac
ggcatcggggacgacaagcgcatcagcacgctgatgaaaaccttcatgaagtggtgcaac
gcgccggggtcagacgaggagagcagcgccacctatcagcgcatgctggcacagctggcc
cagtgtgaacacgccatggagaaaacgcagctcattcatggcatgaacacccacgaaatc
aacaactacgaacaactctacactgatatagaacagagtatagaagatgctcacacgaag
atcggggactgtaaacaggaactccagcatgcaaagagagtccgcaagaacagacaagag
tacgacgctcttgccaaggtcatccagcagcacccagacagacagcagacgatgaggaga
cttgaagagctgcagaaggaacttaagacactgaaggactccagggagggtctggaggcc
aagatggagatgcgccagaaacagttccatgtgttggtcacctccatccatgagttgcag
gccatgctagaagaagatgagaaggatgaggatgaagaggaacagatggagacaggctcc
agcacctag
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integrated database retrieval system
