Branchiostoma floridae (Florida lancelet): 118415386
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Entry
118415386 CDS
T01074
Name
(RefSeq) uncharacterized protein LOC118415386
KO
K25037
podocan
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
bfo00535
]
118415386
Proteoglycans [BR:
bfo00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class V
118415386
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRRNT
LRR_9
Motif
Other DBs
NCBI-GeneID:
118415386
NCBI-ProteinID:
XP_035675845
UniProt:
A0A9J7MQS7
LinkDB
All DBs
Position
5:complement(5086748..5119180)
Genome browser
AA seq
2913 aa
AA seq
DB search
MALVKPGVVLWLASLLLLTVSTHACPQPCTCTGTTVDCSERELDTIPDNIPRNTTELFLC
GNKMTSIPSGGFAGLANLTVLYLDRNQITEEGLSRNAFQGLRFLKELHLTNNSLTAVPVE
QLKALTRELVYLDLSENSILQVPRGAFSSLHSLRELKLRKTGLEEVFPESFSGMDRLEIL
NLENNDMTVFPKEALQRLPYLRRLVVRGNPISELPPAALEGAPAIEYLDARNMHLKTLDR
GVFTNLPHLASIFLSGNTMLQTIDKNAFLTLGRLKTLAIDDCGLETLDEFTFKQVPSLYV
VTMHDNQWKCDERMCWLRDWMLSTRVHIPYMTNISCFLPERNGGRSLITLTSHDCDQDND
DVDFKVKTKSQTTSLTEHQTDNGDEMTDEDDFDTTEIKGLDERSFIVGESVTYYRGKSRK
KCPRGCKCKKRYVDCSRIGLTTVPDNVPRRTTRLYLNNNNITNIPNGAFRYLSNLKVLEL
QNNFISSEGMADHAFDGLKNLEGLYITNNLLTEVPMYLSGVSYQLKYLDLSGNPLGNVPS
GIFRGFKMLKDLWLRGVGISSLKKGTFRGMRNLEGLYLQYNSLKKVPNEALRHRTNLKRL
HLRGNPIVDLDERSFKGLSSLEYLDLGYTKMMDLNEWCFYKLPNLETLVLSGNLNLSTIH
KNTFSRLVNLKFLKLHECGLKHLEPDFLEMMPMLEWVSLYENPWRCDSTMCKLMRWMETT
SVSIANVDKIKCSTPEHMKGTAITRLMDAPEAVQMCQDVLVSPGGTNEIPGGGSSVKPDS
NVVSPSGGCPLQCRCYGSIVDCADRSLKSVPVGIPPSTERLHLQNNMITNIPEGSLSGLE
ALKFLHLENNDLTLDGLPQGSLSTLSNLQGLYLANNKLSAIPPVVLNSLAFSLKHLDISN
NPIGNIAPGTFDDFQNLLELMMTRTGMTEIYEGSFSGLQKVQRLYLAFNNVTAIPYWELE
DMHDLKEFCIAGNPITDIYEDALNDDIAVEYIDLSSTMISYIPERAFVKMPSLSTILLTG
NKKLSYIHERSLKHCPNLKSVAISNCMLEWLDPSTFMGVSSLSWVALHDNPWVCDRCIAG
LTQWMSQTQAYIPYRNRVTCAGPTSLQGATVDDLQVDSLQVGQCDRPDEMPEKSRPQPPP
YPGVIESVTDAPEVVPTPAPGSERPTTGATLDGCPSQCECYELTVNCANLGLTEIPADIP
AATERLYLNNNQISNVQPNGFVGLAALEFLHLENNKITDEGITEKSFSGLPLIEGLYLSN
NLLRQFPTIPTDLAEGLLRFDISGNPIRALPAGTFYGFSNLKDLFARRIGLTELQTNSFF
GLDSLETLYLEYNELTTIPTMALQNLRNLKKLYLRDNKVTELPQKAFFGLDSLELLDLRY
MLLSTIHDMAFEGVKSLMSLLLAGNERLQSLPRNVFSGLPELQDIQLNNCGFESIEGGIF
EDIPSLQSLTLQENPWSCEAPLCSLRRWMDTSEVRIEARDRIACYMPESLRGQTLDSLST
ASLCQGLPSPTAAPDRELVTDRETPMETQAPPVRPLTTQEERVATRPTQPTPTRPRVTEG
RPYPTAVTERAPVQPGTVPCPSKCSCNNDLVDCGKAGLTEIPSDIPPNTQHLYLDNNFIT
EIPDGVFSSLARLQVLEIQYNMITSENIGQRAFDGPANMVYLYLTGNRLTQIPLVLPASL
EYLFVEENNITGVPSERLQQFQEAVPSLTWLSLHQNPYECTPGSMCAFRRWLSTTRVTIP
FREKVVCMEPSSRQGLLVENISEEEMCSDQAPFTDVPVVERVTAAQPTEEEEEISGDFPT
TTEPSFLITRTTYRPPTRPRPKATRPPWTSSRPRPTSRVPTEGEIFPEADGACPDACRCE
YEYVDCSYAQLNEVPRNLPSTTEHLYLNHNNIKSIPSRIFSNLKRLTVLEMQHNQITSDQ
IADDSFVGLDNLLYLFLSKNQLTDLPVNLPYTLQYIDLDGNQIRTVTDSVLSTLSSQPSL
NWVSLHENPWACDARLCFLRQWLDETDMEVPNRDKVLCASPSYRREQPVGGFTVEEICDT
VPEAVTEEPRQPETPKEPITTEEGSGEGSGYLTPGFPNRPDVNPLRPPAVPSFPDLYFPT
FPPVVGRQRTTVAPYNVERTTIADYDEEDTGEDTCPDSCRCIEGYIDCGYQGLIEIPPNL
PANAWHLYLNNNNITSIPAGIFRRLSNLRVLELQNNEIVSENIDSEAFSGMDNLLYLYMS
NNLLTDVPNNMPNSLEYGYFDYNQISSISEASMGWILNKNPSLQLIALNDNPWSCDFRLC
PLVSWIENSLVYVPDIDRTQCSSPSNLAERSIDSIAELCERQTQGETNLLPSEQPPAFLE
LPSQLPIGGLPIDGDFQPGKLNGVPTVPPATTAAAPRATVCPLGCTCDNYGYVDCSKLGL
TTIPSDLPPDTRHLYLDDNSIANIKVKDLANVPQLRVLEIHNNLVTNDGIEQGAFNGLRK
LEYLYLSGNSLSSVPVDLPPTLKSLYLDNNYISTIPPTALSQTGNLERLYLENNALTDDG
ITPGSLEGVSNLKYLILSQNRLRSVPSELPKSLEVLSLEDNRLTKIPPYKFYELQDLERL
YLNNNSLTNDGIADEAFEGMISLERLYLSNNSLGAVPYNLPRTLHQLFLQDNRITALEPF
TFSTLPQLKRLYVRGNRLTNNKVADQAFDGLGDLQLLDLSKNNLTSIPGDLPRSLQKLYL
EGNELSTLPLQSFKKVGSLTELDLSNNLLRTSGLHPTAFTFLPQLETLDISDNLLTLPPD
NLPEGLRYLFLQSNDLTAIKRGAFTQLTNLKWLYLQNNRITDDKIESGAFELLLELYSLD
MSANYLTEVPSNLPASLEYLYLKDNDIGRIPGDAFSNTPKLRLLQLANNLLTDGGIDRKA
LADLQHLRTLDLSGNFVTSAPLGLSEEQVEITL
NT seq
8742 nt
NT seq
+upstream
nt +downstream
nt
atggcattagtcaagccgggggtagtactgtggctggcaagcctactcctcctgacggtc
agcacgcacgcctgccctcagccatgtacatgtacgggtacaactgtcgactgctctgag
cgggaactggacactattcctgacaacataccgaggaacacaaccgaacttttcctgtgt
ggaaacaagatgacaagtattccatccggtggatttgcaggcttagctaacttgacagtc
ctttatttggacagaaatcagataacagaagaaggcttgtccagaaatgctttccagggt
ttgagatttctgaaagaactccacctaacgaacaactcacttactgcagttcccgtggag
caactgaaggcgttaacgcgagagttagtttacctggatctatccgaaaacagcattttg
caggttcctaggggagctttctcctccctgcatagtctgcgggagttgaagctccggaaa
accggacttgaggaagtctttccggaatcgttcagtgggatggacaggctggagatactc
aacctggagaataacgacatgaccgtctttcctaaggaagctctacagcgactgccgtac
cttcgccgccttgtggtgagaggcaacccgatctcggagcttccaccagctgccctggaa
ggcgcgcccgctatcgagtacctggacgcacgtaacatgcacctgaagaccctggacaga
ggtgtgttcacaaatctgcctcatctcgcctccatcttcctctcaggaaacaccatgtta
cagaccatcgacaaaaacgccttcctcacattgggaaggttgaagacgcttgccatcgac
gactgcggactggagacgctagatgagttcacgttcaagcaggtcccgtccctgtacgtg
gtgacgatgcacgataaccagtggaaatgtgacgagcggatgtgctggctgcgggactgg
atgctgtccacccgtgtgcacatcccttacatgaccaacatctcctgcttccttcccgag
cggaacggcggcaggtctctcatcactctcaccagccacgactgtgaccaggacaacgat
gacgtggacttcaaggtaaagaccaaatctcaaaccaccagcctaacagaacaccagaca
gacaacggagacgaaatgacagatgaagatgacttcgacacaacggaaataaaaggtttg
gatgagcggtctttcatcgtaggagaatcagttacgtactaccgggggaaaagccgcaaa
aagtgtcccagggggtgtaaatgtaagaaaaggtacgtggactgtagcaggatcggtctg
acaacagttccagacaatgttcctcgcaggacgactcgcttatacttgaacaacaacaat
attactaacatcccaaatggggcatttaggtacctgagtaacttaaaagttctggagtta
caaaataacttcatctcgagcgaaggtatggctgatcacgcttttgacgggctgaagaac
ctggagggactgtacattaccaataacctgctgacggaggtgcccatgtacctgtcaggt
gtgtcttatcaactcaaatacctggatctgtccggaaatcctcttggcaatgtgccttcg
ggaatcttccgagggtttaagatgttgaaggacttgtggcttaggggagttggcatatcc
tctttgaaaaagggcacgttccgcggaatgagaaatttggagggtctttatctgcagtat
aacagcctcaagaaggttcctaacgaagccctcaggcacaggacaaatctcaagagactg
catttgcgcgggaatccgatcgtcgacttggatgagaggtcttttaaaggactatcttca
cttgaatatcttgacttggggtacaccaaaatgatggatctgaacgaatggtgcttctac
aagctaccgaaccttgaaacacttgtcctgtccggcaatctgaacctgtcgactatccac
aagaacacgttctcccgcctcgtcaacttgaagttcctgaaacttcacgaatgtggcctg
aagcacctggagccagacttcttggagatgatgccgatgctggagtgggtttccctatac
gagaacccctggcgatgtgactccaccatgtgcaaactgatgcggtggatggagacaacg
tcagttagcatcgccaatgtggataagatcaagtgttctactccagaacacatgaaaggt
acagccataacgcggctgatggacgctcctgaagctgtgcagatgtgtcaggacgttctg
gtgagtcccggtggaaccaacgagattcccggaggcggctcttccgtcaaacctgattcc
aatgttgtgtcgccctctggtggatgcccgctgcagtgcagatgttacggaagcattgta
gactgcgcagacagaagtttgaagagtgttcctgttggaattccccctagcactgagagg
ctgcatctacagaacaacatgattacaaacatccctgaaggctccctatcgggtttggag
gcactgaaattcttgcaccttgagaacaatgatcttaccctggacggattgccacagggg
tctctaagcactctgtccaacttacaaggtctgtatcttgcaaacaacaagttatcggct
attccacccgtggtattgaacagcctagctttcagccttaagcacctcgacatctccaac
aatcccatcggaaacatcgcacctgggacgtttgacgacttccagaacttactggaactg
atgatgacgagaaccggcatgacagaaatctacgaaggctccttttccggtttgcaaaag
gtgcagcgtctatacctggcctttaataacgtaacggccatcccatactgggagctagag
gacatgcatgacctgaaggaattctgtatcgccgggaaccccatcacggacatttatgag
gatgctcttaatgacgacattgctgttgaatacatcgatcttagcagcaccatgatttct
tacatcccagaacgagcttttgtaaaaatgccaagcctcagcaccatcctcctgacgggc
aacaagaaactaagctacatccatgagcgcagtttgaaacattgccccaacctgaagtca
gtcgccattagcaactgcatgctagaatggttagacccgtccactttcatgggtgtgtcg
tccctgtcgtgggttgcgctacacgataacccgtgggtgtgtgacaggtgcatagccggc
ctcactcagtggatgagtcaaacacaagcttacataccttaccggaacagggtgacatgt
gcaggccccacaagtttgcagggagccacagtggacgatctccaagtggactccctccaa
gtgggtcagtgtgacaggcctgacgaaatgccggagaagtccagaccacagcctccgccg
tacccgggtgtcattgagagcgtcacggatgccccagaggtcgtcccgacacctgctccc
ggatctgagcggccaacaaccggcgcgacgttggacggctgcccaagccaatgcgaatgt
tacgagctgacggtgaactgcgccaaccttgggctgacggagattccagctgacattccc
gctgccacggaacgtctgtacctcaacaacaaccagatctcgaacgtccaacctaacggt
ttcgtcggcctagctgcactcgagtttcttcatcttgaaaacaacaaaattacagacgaa
ggtataacggagaagtcctttagtggcctgcctcttattgagggattatacctttccaac
aaccttcttaggcagtttcctacaattcctacggatttggcggaaggtcttctgcgtttt
gacatctcaggcaacccaattcgcgctcttccagccggaacgttctatggcttctccaac
cttaaggacttgtttgcccgtcggatcggacttacggagttgcagaccaactcgttcttc
ggtcttgacagtttagaaaccttgtatcttgagtacaacgagttaaccaccattcccacc
atggccctccagaatcttcgtaatctcaagaagttgtacctccgtgacaataaggtgact
gagttgccacaaaaagcattcttcgggctagactcactggaactgctggatctgcggtac
atgttgctgtccaccatacacgacatggcgttcgaaggagtgaagagtctgatgtccttg
ttactagccggcaacgagcggcttcagtctcttcctcgtaatgtcttcagtggtcttcct
gaattacaggatatacaactgaataactgcgggtttgagtccatagaagggggtatattt
gaggacatccccagccttcagagcttgactctccaggagaacccgtggagttgtgaggca
ccgctgtgctccctcaggcggtggatggacacgagtgaagtacggatcgaggctcgagac
cgcatcgcttgctacatgccggagtcacttcgtggacagacgctggactcgctcagcacg
gcctccctgtgccaggggctcccatcaccaactgctgcaccggacagggaacttgtcaca
gatagggagacgcccatggagacacaggcgccccctgtaagaccactgacaacacaggaa
gaaagagtggccacacgtccaacccagccgactccgacacgaccgcgggtaacggaaggg
cggccgtacccaacagcagtgacggagagagcgcctgtccaaccagggacagtgccttgt
ccgtccaaatgctcctgtaacaacgatctggttgactgcggtaaggccggcctgacggag
atcccctcagacatcccgcccaacacacagcatctctacctggacaacaacttcatcacg
gaaatcccggacggcgtcttctccagcctcgcccggcttcaggtgctggaaattcagtac
aacatgatcactagtgagaacattggccagcgtgcgtttgacggcccggccaacatggtg
tacctgtacctcaccggcaacaggctgactcagatcccgctggtcctgcccgcatcgctg
gagtacctttttgtcgaagaaaacaacatcaccggtgttcccagcgaaaggctgcaacag
ttccaggaggctgtaccatccctaacgtggctgtccctccatcagaacccgtacgagtgc
acccccggcagcatgtgtgcgttccgccgctggctctccaccactcgtgtcaccatcccc
ttcagagagaaagttgtctgtatggaaccaagctcccgacaagggctactggtggaaaat
atctcggaagaagagatgtgtagcgaccaagctcccttcacagacgtaccggtcgtagaa
cgtgttacagccgcacagccgacagaagaggaggaggagatatctggtgacttcccaacg
acgacagagccttccttcctcattacaagaacaacttaccgccctcccacaagaccgcgt
cccaaggcgacccgaccgccgtggacatctagcagaccccgtccaacatccagagtaccc
acggagggcgagatcttccctgaagctgacggcgcatgtcccgatgcgtgccggtgtgag
tacgagtacgtggactgtagttatgcccaacttaacgaagtgccgagaaacttgccgtcc
accacagagcatctttacctcaaccacaacaatatcaagtccattccatccaggatattc
tccaatctgaaaagactgacggtattggagatgcaacataaccagataacaagcgaccag
attgcagatgacagctttgtcggactggacaaccttttgtatctatttttgtccaagaat
cagctcacagaccttccagtcaatttgccgtacacactacagtacatagacctagacgga
aaccagattcggactgtcacagactccgtcctgtcaactctaagcagccagccatctctg
aactgggtctccctgcacgagaatccgtgggcttgtgacgctaggctctgctttctcaga
cagtggctagatgaaacagacatggaagttccaaatcgcgacaaagtattgtgtgcctca
ccatcctaccgtcgcgagcagccggtcgggggctttactgttgaagagatttgcgacacg
gtgccagaagcagtgacagaagaaccgcgacagccagagacgcccaaggagccaatcaca
acggaggaaggctctggagagggttcgggatacctgacgcctggatttcctaaccgccct
gatgttaacccactgcgcccaccagcagtgcccagcttcccagatctgtatttccctacc
ttcccgccagttgtagggaggcagagaactaccgtggcgccttacaatgtcgagagaacg
accattgctgattacgatgaggaagacacaggagaagacacgtgtccagacagctgccgg
tgtatcgaaggctatatcgactgtggctaccagggtctaatcgaaatcccccctaatctc
ccagcaaacgcttggcacttatatctcaacaataacaacatcacctctatcccagcgggg
attttcagacgcctgtccaacctgcgggttctggaacttcagaacaacgagattgtcagt
gagaacattgacagtgaagccttcagtggaatggataacctcctctacttgtacatgtcc
aacaacctgctgacagacgtgcccaacaacatgccaaacagcttggagtatggctacttt
gattacaaccagataagtagcatctccgaggcatctatgggatggattctcaacaaaaac
ccgtctttgcagcttattgctctgaatgacaacccgtggagttgtgacttccgtctgtgc
cccctggtgagttggatcgagaacagcttagtttacgtgcctgatatagacaggacacag
tgctcatctccatctaacctggcggaaaggagcatcgacagcattgcagaactctgtgag
cgacagacacaaggcgaaactaacctactaccaagcgaacagccgcctgcgttccttgaa
cttccctcccaactgccgattggcggtctgcctatcgacggcgacttccaacctggaaaa
ctaaacggggtgccaaccgtgccgcccgcaaccactgccgccgccccgcgcgccaccgtg
tgccctctcggctgtacatgcgacaactacggctacgtcgactgcagcaaactcggccta
acaactattccatccgatctcccaccagatacaaggcacctttacctggacgataacagc
atcgctaacatcaaagtaaaagacctggctaacgtaccacagctacgagtcctcgagatc
cataacaacctcgtcaccaatgacgggatcgagcaaggagcgttcaacgggctccgcaag
ctggaatatctgtacttgtcagggaacagtctgtcatcagtcccggttgatctgcctccc
acgctgaaatcactatacctggataataactacatctctaccatccctcccacggctctg
tcccaaactgggaacctcgagcggctgtacctggaaaacaacgccctgacggatgacggc
atcactccaggttccctcgagggagtgagcaacctcaagtacctcatcctgtctcaaaac
cgcctgaggtcggtcccgtccgaactgcccaaatcactagaggtcctgtcactagaggac
aacaggcttacaaagatacccccatacaagttttatgagctgcaggacttggaaaggctt
tacctaaacaacaacagccttactaacgacggcatcgcggacgaagcgttcgaaggaatg
atcagtttggagcgactgtacctgtccaataacagcctgggtgccgttccgtacaacctg
ccccggacgctgcaccagctcttcctccaggacaaccgtatcacggcgctggaaccgttc
accttctccaccttacctcagctgaagcgtctgtatgtgagaggcaaccggctcaccaat
aacaaggtcgccgatcaggcgtttgatggcctgggagacttgcagctgctcgacctgtcc
aaaaacaacctaacatccatccctggggacctgccgagaagtctacaaaaactttacctt
gaaggtaacgagctctccacattacccttgcaatccttcaagaaggtgggctcgctgact
gagctggatttgagcaacaacctcctgcgcacgtcgggcctgcacccgactgccttcacg
ttcctgccgcagctggagacgctggacatatccgacaacctgctgaccctgccgccggac
aacctgccggaaggactcagatatctcttcttgcagagtaacgacctgacagccataaag
cgcggcgccttcacccagctgaccaacctgaagtggctgtacctgcagaacaaccgcatc
acggacgacaagatcgagagcggcgcgttcgaactgctgctggagctgtacagcctggac
atgtccgctaactatctcacagaggtccccagcaacctgcctgcctcgctagaatacctg
tacctcaaggacaacgacattggacgcataccaggagacgctttctccaacacgccaaag
ctgcggctgcttcaactggccaacaacttactcacggacggagggatcgacaggaaggca
ctggcagacttgcagcacctgcgcactctggacttgtctggcaactttgtgacgtcagca
ccgctgggactgtccgaggagcaagtggaaataacactatag
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integrated database retrieval system
