Branchiostoma floridae (Florida lancelet): 118415402
Help
Entry
118415402 CDS
T01074
Name
(RefSeq) CXXC-type zinc finger protein 1-like isoform X1
KO
K14960
COMPASS component SPP1
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bfo03000
]
118415402
03036 Chromosome and associated proteins [BR:
bfo03036
]
118415402
Transcription factors [BR:
bfo03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
118415402
Chromosome and associated proteins [BR:
bfo03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
118415402
COMPASS/SET1 complex (yeast)
118415402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CpG_bind_C
zf-CXXC
PHD
PHD_5
Pox_Ag35
DUF87
Adeno_PIX
Motif
Other DBs
NCBI-GeneID:
118415402
NCBI-ProteinID:
XP_035675886
UniProt:
A0A9J7MR00
LinkDB
All DBs
Position
5:complement(19900765..19908939)
Genome browser
AA seq
658 aa
AA seq
DB search
MDSDKEESSALSQEELDRQEQIAKQFIMPERQAKMAQLFKQVEPVQYCICRTSDTDRFMI
GCEKCDEWFHGDCIQVSQEMARTIKQWYCTTCMEKDPMLQIRYHTKKEKHKEKKDKKEKN
KDKKKKLKKLLKKHRHSSSGSGLDVALPFDLEKTKKVAVSQVSLSEETLTQQQLANALKR
SSRMCGECDACLRTEDCGKCDFCRDMKKFGGPNKIRQKCRLRQCLLKSRKLLRDKLGRPV
SMTRYMAQQKARASAAAAAARAAAAAMTTTTDSESDVNFYSNFLQSQSSGNKHDAYADMS
GRVFESIGTSDHDYTVFRSPGEKKRAVKLKHAQSREKKPKPAKKALQRHKRKATSDDTSG
DKVKFDDSKDPPRQCYGPECVNAARPGSKYCSDDCGLKLATNRIFEFLPQRIQQWQQSPC
IAEEGEKRTLEKIRSEQLEARKQLAVLDKQSGELEKTIERAKNVPIDPDQDSQDEGGGDD
TELSIYCVSCGHPVHPHRALKHMEKCFAKYESQTSYGSIYKTRIEGANFFCDYYNSQNQT
YCKRLRVLCPEHTRDPKVNADDVCGCPLTKNVVDTTGEICRVSKRKCNKHYGWEKLRRAE
IDLERVRQWLKLDDLFEQERNIRYAMANRSGLLGLMLHQTFDHDLMNQQNVPFQQNSE
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggacagcgacaaggaggagtcgtcggctctctcgcaagaggagctggaccgtcaggag
cagatcgctaaacagttcatcatgcctgaacgtcaggccaagatggcgcagctcttcaaa
caggtggagcccgtacagtactgtatctgtcgcacctccgacacagacaggttcatgatt
ggctgtgagaagtgcgatgagtggttccatggagactgtatccaagtcagccaggagatg
gccaggaccatcaaacagtggtactgtacaacctgcatggaaaaggacccaatgcttcaa
atccgctaccacacaaaaaaggagaaacacaaagaaaagaaagacaagaaagagaagaac
aaagacaagaagaagaaactgaagaagctcctgaagaagcaccgtcacagcagcagtggc
agcggcctcgatgtcgccttgccctttgacctcgagaagaccaagaaggtagcagtgtca
caagtgtcactgtcagaagaaacactgacccagcagcagttagccaacgccctgaagagg
tcgtcccgcatgtgtggggagtgtgacgcctgtctgcgcacagaggactgtgggaaatgt
gacttctgtagggacatgaaaaaatttggaggtccaaacaagatccgtcagaagtgtcgt
ctgagacagtgtctcctgaagtcaaggaaactgttgagagacaagctcggccgtcctgtg
tccatgacccggtacatggcgcagcagaaggcccgagcctcggcagctgcagccgcagcc
agagcagctgcagcagcaatgacgacaacaacagactcggagagcgacgtcaacttctac
agcaactttctacagtcacagtctagcgggaacaaacatgacgcgtatgcagacatgtcc
ggcagagtgtttgagtctataggaacatcagaccatgactacactgtcttccgtagtcct
ggagaaaagaagagagcagtcaagttgaaacatgcacaaagtagggagaaaaagcccaag
ccagccaagaaggccctacagcgacataagaggaaggccacctcggacgacacgtctggt
gacaaggtcaagtttgacgactctaaagaccccccacgacagtgctacggtccagagtgt
gtcaacgctgccagaccggggtccaagtactgttcagacgactgtggactgaagttagcc
accaatcgaatctttgagttcctaccgcagagaattcaacagtggcaacagagcccctgt
attgcagaggagggtgagaaaagaaccttggagaagatccgttcggagcagttggaggct
cgtaagcagcttgctgtgttggacaagcagagcggcgagctggagaaaacgatcgaacgt
gccaaaaatgtaccgatagatcccgaccaagacagtcaagatgagggaggtggtgatgac
acagagctgagtatctactgtgtctcctgtggccaccctgtccacccacaccgcgcactc
aaacacatggagaagtgcttcgcaaagtatgagagtcaaacatcttatgggtccatctac
aagacaagaatagaaggagccaatttcttctgtgactactacaactcccagaatcagacc
tactgtaagaggctgagagtcttgtgtccagaacacaccagggacccaaaggtgaatgca
gatgatgtttgtggctgtcccctgaccaagaacgtggtagacactaccggagagatctgc
cgggtctccaaaaggaaatgtaacaagcactacggttgggagaaactacgcagggccgag
attgacttggagagggtccgacagtggttaaaactggacgacctctttgaacaagagcgt
aacatccgttacgccatggcaaaccgttcaggactgctcggcctgatgctacaccaaacc
ttcgaccatgatctcatgaaccagcaaaacgtgcccttccagcaaaactcagagtaa
DBGET
integrated database retrieval system
