Branchiostoma floridae (Florida lancelet): 118415423
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Entry
118415423 CDS
T01074
Name
(RefSeq) stabilin-2-like isoform X1
KO
K19013
stabilin-2
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
118415423
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
bfo00536
]
118415423
Glycosaminoglycan binding proteins [BR:
bfo00536
]
Hyaluronan
Cell surface receptors
118415423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fasciclin
EGF_3
EGF_STAB1-2
cEGF
EGF_TEN
EGF
FXa_inhibition
EGF_Teneurin
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
118415423
NCBI-ProteinID:
XP_035675926
UniProt:
A0A9J7L4Z9
LinkDB
All DBs
Position
5:6113035..6287491
Genome browser
AA seq
2505 aa
AA seq
DB search
MLLAGFGFARVWLTVWLACAWSSEAREQETVPPAAPTVSSPRPSRFGNRCDVTATVTATT
ACRTCPLNAEVECPKGSTKTTQGEGLRDCQYRIPVFGSWGIVLTGCHHVCARQVLQPQCC
PGYWGPDCQECPGGADNPCSSHGACAGGIQGNGTCTCEGGFGGVACETCKSDKLYGPDCS
GECTCVHGICKSGLEGDGSCSCLSGYSGEHCDQPLPQCDALDCNQFGRCVEPAEGEELVC
RCLPGYHGDGKNSCLPIDPCLEAVCAPQADCIHTGPNQHRCECRPNYSGDGRVCLPIDPC
QTNFGGCPTNSTVCVYDAPGKAHCECKQGYVEMADGDTGLMETQGCGLIDICQHDNPCHK
NANCTTVAPGQTECVCKLGYVGDGINCYGNILERISELNNEDGGPLRGHLVYSSILLQSA
YARTLTRNGPFTVFIPNDAAFQNKFDVVRLVSDLPKAQHLAKLHMLPGHLTAHQLNITAN
VFNLEGVGMEIEPNKHDTFLRVRLLGTNVKSKMVFPDIVAANGLIHVIDTVLDMDSAVPS
MPEATIKELIEVEGKYNRMEGLLKLVGMAEMFDKPGPFTIFAPNNGAWDSLPQGTLDYLM
SEEGKPKLKAILKNHIIVNNQIEVQDLIFMPRFTTLENMAITVSVTGQGAIKLDGSARVY
QTDIKASNGYIHSIDKVLIPDAIKPLFNHRCDVMSYDVVAGSCSSCSQIDLNGCPEGAEP
LEIVERGCVFWTLIWNIRFPHTGCSRKCNQTVMLPECCEGFYGESCLPCPGGYRTPCNLH
GQCNGGINGNGTCVCDPGFTGTTCEICEDKLLYGVNCDKECDCLHGECNGGPDGDGTCKP
NTCEQGWTGENCDQPINPCGPNLDVCHENAQCDNQFGNIRCVCKPGYTGSGLECIEMNPC
RLPDRGGCHPDATCIKVGPGTNVCQCDEGWEGDGISCIPVDNCRSLNRGGCDPHADCIFT
APGQNDCRCMRGFRGDGKTCTPINPCLENFGGCHSQAVCTQTGPGTNNCTCVDGYIGDGR
RCYGTLLVEMTGRPELSTFSNLIATAGLQNLFSGPVMRTVFAPTDDAFLKLSEEVKSRWW
EIDNIPFLIKYHTANSSLTFDNLTQYYLDQSQPLPTLLLGTMLSLTQDDGYLLVGGAKII
GNESLASNGIIHVIEQVLLPPESVLPTLAPPRPPLSELMEGLTDYSLFAHYLSEDGLLEQ
LETVGPYTLFAPNNAAVLAFTRNGTDPRAISHSILRYHIVTGLVLTSDRIIDGQHFATSL
GHNYQIGFAHSGNKLLVNRDPVVSPDMLTHGGVVHGMSTVLKVQRNRCDSNITTTIQGNC
YSCQYPPVCPPGTKPLKRPRVSNCIYVHIVFGVARRSLGCSATCVRTTFSRQCCRGYFGM
QCAACPGPVDDPCYGNGECVDGLEGTGECKCQANFGGTACENCVPGRYGEDCGQVCTCVN
GTCNEGVNGDGSCTCNVGWRGPHCDEAVTGDECAGTCHSSANCVGSGDYARCICAAGFTG
TGQQCSVINPCEVSNGGCSEHAQCMRTTPGNRKCSCLDGYTGDGVICLEIDPCQSNNGDC
HENAVCLHTGPNMRVCHCKSGYEGDGERSCRAVNPCTTNNGGCSGFAVCNHTGPNERECI
CQDNYIGDGITCTGNIGQELGLNPNTSLFYSLLQEFFSPSPGTQSTNSHQLVGAGPFTVF
APTNRAFMTLQQDTPGQVLKWRRNGMLHQVLQYHMIGCVQLMSHTMEKQDSLRTLQGDLI
KLSLTQTGLLLNGDTHINRLDHETSNGVIHYIDSVLTPSNMQSFEDLVANITVVATSFKY
NLFLGALQTAGLISLVSDPVHTPITMFWPTDQALKSMPNRKYQELLKPKNRDELIEYLKY
HIIRDARLSATALVTSNDLRTLQGSMVEVNCKGEKGDLYVNEDSKIVQRGIMFEGGVAYG
IDHILEPPSIGGRCDVMSNRTFMGECGPCRADNICPDGSRPVGPVQRCVYMSYYRQANGC
KRQCVYTTLKPKCCPNYYGRDCRACPGGAQQPCNGHGSCDDGVDNHGHCRCNVGYRGQAC
ELCDPGRFGPKCEPCRCSNRGLCRDGIENDGACFCEAGWTGPKCDQRLDSMPTCDPQCDQ
NAVCREDNMCQCLPNFQGNGRRCSAIDLCALNNGGCHLRARCRQVGTNTTCQCEKGYEGD
GYVCRGIDRCAVNNGGCHANATCRYTGPNSRTCTCKAGFTGDGEQCKLPRTTIGKCDINN
GGCSPNGRCVEIRPSARKPAGDVQCSCMKSFVGNGTMCNSEVYQTLQFTPQFSRFYIEVQ
LFERRSSEGRKLRRILEQSQLKLTLFVPSNEGLPVNMSLSDKDIKNHLLMSKSFVRYEDF
KDGMVLKTKADMELVVTADFKKGVYLVNGQEVLEWNIPTTNGIIHIIKGPLFALRAPEAS
GQIRDVGPTVTSGTIAGIIIALLLVVVLCMVAACFFVKRHKRSPVLGKYKKTEDGGSVTF
DNLNNCKEEAEFDTFENPTYSKLCNLEEEEKLMRQQDGYDSVATA
NT seq
7518 nt
NT seq
+upstream
nt +downstream
nt
atgttgttggcggggtttgggttcgcgcgggtttggctaacggtatggctggcgtgtgct
tggtcatcggaggctcgggagcaggagacggtgcccccggccgcccctacagtatcgtcc
cctcggccgagccgcttcgggaaccgctgcgacgtaacggcaacggttacagcgactaca
gcgtgtcggacttgcccgttgaacgcggaagttgagtgtccaaaaggctcgacaaagaca
acccaaggagaaggactacgcgactgccagtaccgcatcccagtcttcgggtcttggggc
atcgtcttgaccgggtgccaccacgtctgcgcccgccaggtcctccaaccccagtgctgc
ccaggctactggggacccgactgccaagagtgcccaggaggagcagacaacccctgtagc
agccatggagcctgtgcagggggcatccaagggaacgggacatgcacatgcgagggtgga
tttggaggagtagcctgtgagacgtgtaaaagtgacaagctgtatggtccagactgtagc
ggagagtgcacctgtgtccatggcatctgtaagagtggtctggagggtgacggcagctgc
tcctgtctctctgggtactcaggagaacactgcgatcaaccgctgccccagtgtgacgcc
ctggactgtaaccagttcgggagatgcgtggagcctgccgaaggtgaagaactggtctgt
cgctgcctgccaggttaccatggcgatggcaaaaactcctgtctgccaatcgacccgtgc
ctggaggcggtatgcgccccacaggcagactgtatccacactgggcctaaccagcaccgc
tgcgagtgcagacccaactacagcggagacgggcgtgtgtgcctgcccatcgatccgtgc
caaaccaacttcggcggctgtccgaccaactcaaccgtttgcgtttatgatgcgccaggg
aaggcacactgtgagtgtaagcagggctatgtggagatggctgatggagatacagggctg
atggaaacccagggctgcggtttgattgacatctgtcaacacgacaacccatgccataag
aacgccaactgcaccaccgtggcgcctgggcagacagagtgtgtctgcaaattggggtat
gtgggagatggtatcaactgctacggaaacatcttggagcgcatctccgagttgaacaac
gaggatgggggaccactgcgaggccacctcgtgtacagcagtatcctgctacagagtgcc
tatgccaggacactgaccaggaacgggcccttcacagtcttcattcccaacgatgccgca
ttccagaacaagtttgatgttgttcgacttgtgagtgatcttcccaaggcccagcacctt
gccaagctgcacatgctacccggacacctgacagctcaccagctcaacatcaccgccaat
gtctttaacctggagggtgtaggcatggagatagaaccaaacaagcatgacactttcctg
cgtgtccgtcttcttggcaccaatgtcaagtccaagatggtgttccccgacattgttgca
gccaatgggctgatccacgtgatcgacacagttctggacatggattcagcagtgcccagt
atgccagaggccacaataaaagaactgattgaggtggaaggcaagtacaaccggatggaa
ggtttactaaagcttgtaggaatggcggagatgttcgacaagcccggaccgttcaccatc
ttcgctcccaataatggagcctgggactctctgccccagggcacgctggactacctaatg
tcagaagagggaaagccaaagcttaaggccattctaaagaaccacatcattgtcaacaat
cagattgaagttcaggacttgatcttcatgccaagattcaccactctggagaacatggcc
atcactgtctcggttactggccagggtgcaatcaagcttgacggcagtgcccgtgtgtac
cagacagacataaaggccagcaacggttatatccacagcattgacaaagtcctcataccc
gacgccatcaagcccctcttcaaccatcgctgtgatgtcatgtcctatgacgtagtggca
ggcagctgcagcagctgtagtcagattgacctgaacggatgtcctgagggtgcagaacca
ctggagatagtggagcgtggctgtgtgttctggacactgatctggaatatccgctttccc
cacactggctgttcccgcaagtgcaaccagaccgtcatgcttcccgaatgttgtgaaggg
ttttatggagagtcgtgtctgccatgccccggtggttaccgcacaccctgcaatcttcat
ggccagtgtaatggtggaatcaatgggaacggcacctgcgtgtgtgacccaggcttcacg
ggcacgacttgtgaaatctgcgaggataaactcctgtatggtgtcaactgtgataaagag
tgtgactgtctacatggtgagtgtaacgggggaccagacggagatggtacctgtaaaccc
aacacctgtgagcagggctggacaggtgagaactgtgaccagcccatcaacccctgtggg
cccaacctggacgtctgccacgagaacgcccagtgtgataaccagtttggtaacataaga
tgtgtgtgcaagccaggatacacagggtctggactagagtgtatcgagatgaacccttgc
cgcttgcctgacagaggaggatgccatcctgatgctacctgtatcaaggtgggaccaggt
accaacgtgtgccagtgtgatgaaggatgggaaggggatggcatatcctgtatacctgtg
gacaactgtcgctccctgaacaggggaggatgtgatccacatgcagactgcatctttact
gcacctggacagaatgactgcaggtgtatgagaggtttccgtggcgatgggaaaacgtgc
acacccatcaacccctgtctggagaactttgggggatgtcatagtcaggctgtgtgtacc
cagacaggcccaggtacaaacaactgcacctgtgtggatgggtacatcggggacgggcgc
aggtgttacggcaccctgctggtggagatgacaggacgacctgagctgtccacatttagt
aatctcattgctacagctggcctgcagaatctattttctggccccgtgatgagaacagtg
tttgctccgactgacgatgccttcctcaagctgtctgaagaagtcaagtccaggtggtgg
gagatcgacaacatcccattccttatcaagtaccacacagccaacagcagcctgaccttt
gataacctgactcagtactacctggaccagtctcaacccctgccaaccctcctcctgggc
accatgctgtcactcacacaagatgatgggtatttgcttgtcggaggtgcgaaaatcatc
gggaatgaaagtctggcttccaacgggataattcatgtcatagaacaggtgctgcttcca
cccgagtcagtactgcccaccctggcaccacccaggcccccactcagtgagcttatggag
gggctgactgactactcactatttgcccattatctatcagaggatggcttactagaacag
ttggagactgttggaccgtacactctgtttgcacctaacaacgccgcagtcctggccttc
actcgcaatggaacagatccaagggccatttcccacagcatcctgaggtaccatatagtg
acgggcctggtgctgacctctgacaggatcatcgacggacagcacttcgccacgtccctg
ggccataactaccagataggattcgcccacagtggtaataagctgttggtaaacagggat
ccagtggtcagccccgacatgctgactcatgggggcgtggtccatgggatgagtacggta
cttaaggtacagaggaacaggtgtgactccaacatcaccactaccatacagggtaactgc
tacagctgccagtatccacccgtgtgcccaccaggaactaagccactgaaaaggccacgg
gtgtccaactgcatctacgtacacattgtgtttggggtagccaggagatctctgggctgc
tctgccacgtgtgtcagaacaacatttagtaggcagtgctgccgtggctactttgggatg
cagtgtgcagcatgccctgggccagtagatgacccctgctatggcaatggtgaatgtgtg
gatggactggagggaacaggagagtgcaagtgtcaggctaactttggaggcacggcctgc
gagaactgtgttcctggaagatatggagaagactgtggacaggtgtgcacctgtgttaat
ggcacctgtaatgaaggtgtgaacggagatggaagctgtacctgcaatgttgggtggaga
ggacctcactgtgatgaagctgtcacaggtgacgagtgtgcaggaacctgccattcaagt
gccaactgtgtgggatctggagattatgctcggtgtatctgtgctgctggcttcactgga
accgggcagcagtgttctgtgatcaacccatgtgaggtgagtaatggcggctgttctgag
catgcccagtgcatgaggaccacacccggcaacaggaagtgtagctgtctggatgggtac
actggagacggtgtcatctgtctggaaattgacccatgccagagtaataacggtgactgc
catgagaatgctgtctgtcttcacactgggccaaacatgagagtgtgtcactgcaagagt
ggttacgaaggtgatggtgaacggagctgcagggcagtcaacccttgtacaacgaacaac
ggaggctgcagtggttttgccgtctgtaaccacactggccctaacgagagggagtgtatc
tgtcaggataactacatcggagacggcattacctgcactgggaacattgggcaggaacta
gggttgaaccccaacactagtcttttctattccctccttcaggagttttttagtccatca
cccgggactcagtctaccaactcccaccagctggttggagcaggtcccttcaccgtgttc
gctccaactaaccgggccttcatgacgctgcaacaggacacccccgggcaggtgctgaag
tggagacgtaacggcatgctgcaccaggtgctacagtaccacatgatcggctgtgtgcag
ctgatgtcgcacaccatggagaaacaggacagcctgcgcaccctacagggagacctcatc
aagctcagcctcactcagactggattgctgttgaatggagacacccacattaacagactg
gaccatgagacatccaacggtgtgatacactacattgacagtgtcctgacaccttccaac
atgcagtcgtttgaggacttggtcgccaacatcacagttgtggcaacttccttcaagtat
aacttgttccttggggcactacagacagcagggctgatcagcctggtatccgaccctgtc
cacacccccatcaccatgttctggcccaccgaccaggccctgaagtccatgcctaaccgc
aaataccaggaactgctcaagccgaagaacagggacgaactgatcgagtacctcaagtac
cacattatcagagatgcaaggctgtctgccacagccctggtgaccagtaatgacctccgc
accttacaaggttccatggttgaggtcaactgcaagggagagaagggagatctttatgtg
aatgaagacagcaagattgtccagaggggcataatgtttgaaggaggggtagcgtatggg
atcgaccacatccttgaaccacccagtattggcggaaggtgtgatgtaatgagcaacagg
acttttatgggagagtgtgggccatgtagagcagataatatctgtcctgatggtagcaga
ccagtgggtccagtgcagcggtgtgtgtacatgtcctactacaggcaagctaacggctgt
aagagacagtgtgtgtacaccacactcaaaccaaagtgctgccctaactactatggcagg
gactgcagagcatgtcctggtggagcccagcagccctgcaatggccatgggagctgtgac
gatggtgtggacaaccacggacactgcaggtgtaacgtgggttacaggggacaggcctgc
gaactgtgtgatccaggcagatttggacccaaatgtgaaccctgtcggtgcagtaaccgt
ggcctgtgcagggacggtattgagaatgacggagcctgtttctgtgaggctggctggact
ggacctaagtgtgaccagcgcttagactccatgccgacctgtgacccccagtgtgatcag
aatgctgtgtgtcgtgaagacaacatgtgtcagtgcttacctaacttccagggcaacggc
agaaggtgttctgccattgacctttgtgcgttgaacaatggaggttgccacttgcgggcc
aggtgtcgccaggtgggcactaacaccacctgccagtgtgagaagggttatgagggtgac
gggtacgtgtgcaggggcatcgacaggtgtgccgtcaataacggagggtgtcatgctaac
gctacatgcaggtacactgggccgaactcgaggacgtgtacctgtaaggcagggtttaca
ggcgatggtgagcagtgtaagctgcctcgcaccactattggaaagtgtgatatcaataac
ggaggctgctcacctaacggtagatgtgtggagatcagaccatcagccaggaagcctgcg
ggagacgtgcagtgcagctgtatgaagagttttgtaggaaatggaaccatgtgtaacagt
gaagtgtaccagactctccagttcacacctcagttcagcagattctacattgaagtccag
ttgtttgagagaagatcctcagaagggcggaagctgaggagaatactggagcagtcccag
ctcaagctgacactgtttgtacctagcaatgaagggctgcctgttaatatgtctttatcg
gacaaggacatcaagaatcacttgttgatgagcaagtcttttgtgaggtatgaagacttc
aaggatggcatggtgctcaagactaaggcagatatggagctagtagtgacagcagacttt
aaaaagggagtttacctggtgaatggacaggaggttctggagtggaacatcccgacgaca
aacggcatcattcacatcatcaagggaccgctcttcgccttgagagcaccggaagctagt
ggtcagatccgagatgtaggcccgacagtgacatcagggacaatagctggcattatcatc
gctctactcctggtggtggtcctctgtatggtggctgcatgcttctttgtcaagaggcac
aaaagaagtcctgttttaggaaagtataaaaagactgaggatggaggcagcgtcacgttt
gacaatctcaacaactgtaaggaggaagcagagtttgatacctttgaaaatccgacgtac
agcaaattgtgcaacttagaggaagaagaaaaactgatgaggcaacaggatggctatgat
tctgtagcgacagcatga
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integrated database retrieval system
