Branchiostoma floridae (Florida lancelet): 118415779
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Entry
118415779 CDS
T01074
Name
(RefSeq) host cell factor 1-like
KO
K14966
host cell factor 1
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03083
Polycomb repressive complex
bfo04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
118415779
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
118415779
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bfo01009
]
118415779
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bfo03036
]
118415779
03029 Mitochondrial biogenesis [BR:
bfo03029
]
118415779
Protein phosphatases and associated proteins [BR:
bfo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118415779
Chromosome and associated proteins [BR:
bfo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
118415779
HMT complexes
COMPASS/SET1 complex
118415779
MLL-HCF complex
118415779
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
118415779
Mitochondrial biogenesis [BR:
bfo03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
118415779
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_ATRN-LZTR1
Kelch_5
Kelch_3
Kelch_4
Kelch_1
Kelch_6
Kelch_2
fn3
Motif
Other DBs
NCBI-GeneID:
118415779
NCBI-ProteinID:
XP_035676489
UniProt:
A0A9J7MRQ7
LinkDB
All DBs
Position
5:complement(6572120..6632553)
Genome browser
AA seq
1538 aa
AA seq
DB search
MAAPVLKWRRVTGTTGPTPRPRHGHRAVAIKDLMVVFGGGNEGIVDELHVYNTATNQWFV
PAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNELYELQASRWEWKRLKPKSPKNG
PPPCPRLGHSFTMCGTKVYLFGGLANDSEDPKNNIPRYLNDLYTLELKPQSDVRAWDIPQ
TYGTPPPPRESHTCISYTDKDGKRPRLIIYGGMSGCRLGDLWQLEIETSSWTKPLVNGIA
PLPRSLHSATQISHRMFVFGGWVPLVMDDQKVATHEKEWKCTNTLASLNLETMTWEPLAM
EVFEDSVPRARAGHCAVNIGSRLYVWSGRDGYRKAWNNQVCCKDLWFLETEKPLAPTRVQ
LVRASTNTLEVCWGAIQTADAYLLQLQKYDMPPAQAATLPNAVSNPAMASTPASAALQGS
GSATMIRQMSSGTGPVTAGIMKAPGLQPLRMPTQTTLVGTATTAMPQQSPPVRGRARVKS
PVAVTMASSPRMATSTTNPRILTTTTSPGTLPAGTGMSGIQALAAAAAATQKIPASPSGT
TMRPQLSTTHTGTPVTLTLASGVKSTPIMQYFSNQVNTAATSILKTAAQAAQAGAQQQLQ
GKQIITVHKSGAVTLTPQTQVVTTVVGGVTKTVTLVKSVPVTLQGGKVTLIQTKPLSSTG
MVLGTTPQGATPGVSTMARQLGQLQAKGPLPQGTILKVISTTAGGKTAYITTTTQAGTSK
GATIMGISSVTQQPVVTIPKTIIKTVPVSSVMSSMAGQGGATGGATPTKPTIIAITTKAV
TGVAGMTTGTTSKLPSTYMVKNPTSQGSTQQVVRTVTTTLGVTPMGTVVRTVTSQMQPGV
RIITVPASSITTTTTPTGQVQRIVVTPVTRPSAALQGKTGTITIVTPAGTSVPASTILSS
TSAGATGTSRPITVSVANLPSASNVPVTMTTAQAASALSAATSITPTGITLQSLSTPTAT
TQMKQIIQNTQAITPATSTVTSVAASTSEQGQPPASSAEQPQVGPCGTIHGCGTDDEDED
AEKPKIGPCGTIHGCGTDDEDDEKSKPTIGPCGTIHGCGTDDEDDDKSKPSEGPKIGPCG
TIHGCGTDDEDDDKSKPAEQQKIGPCGTIHGCGTDDEDDEKPKVGPCGTIHGCGTDDEGE
GDDPTPSTTTQADQTQEEAMDTSAPSQPQTSATSTVATSSTAVTSQATLMETGQTASSSV
EQMDTTPATTAAAVAEAEALAAATTSSVMTPSPSAVDGAAAVLATLADSTTTPVSASQAG
ATPVNNGAVAPSLPANVTTNGLGPTVVKTEPDVKSEDQKAVDASSKTLLPGKREHNQWYD
VGIFKGTSATVQYYYLPSENNQKGEDDIDVVNVPDHSMLKKQELLSGTAYKFRVAGINAC
GRGPWSEISAFKTCLPGYPGAPSAIRISKSTEGAHLSWEAPANTAGKILEYSVYLAVKST
SASTPDTKPLTPSQMAFVRVYCGPSASCTVTTSTLSNAHIDYTSKPAIIFRIAARNDKGY
GPATQVRWLQDSSKDTKAAKRVAPSDSKSGTKKVKTEK
NT seq
4617 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcccgtcctgaagtggaggcgtgtgacgggcacaaccggcccgacgccgcgg
cctcggcacggccatcgtgccgttgccattaaggatctcatggttgttttcgggggcggc
aacgagggcatcgtggacgaattgcacgtgtacaacacagccaccaaccaatggtttgtc
ccggcggtgcggggggacatcccgccgggttgtgccgcgtacgggttcgtgtgcgacggc
acccgactcctggtgttcggaggaatggtggagtatggcaagtactcgaatgaactatac
gagctgcaggccagtcgctgggagtggaagagactcaagcccaagtcgcccaaaaacggc
ccacccccctgcccgcgcctgggccacagcttcaccatgtgcggcaccaaggtctacctg
ttcgggggcctggccaacgacagcgaggaccccaagaacaacataccaagatacctgaac
gatctttacacgctggagttgaagccccagtcggacgtgcgagcgtgggacatcccgcag
acgtacggcaccccgcccccgccgcgggagtcccacacctgcatctcctacaccgacaag
gacggcaagcgccccaggctcatcatctacggaggcatgagcgggtgtcgtctgggggac
ctgtggcaactagagatagaaactagttcgtggacaaagccccttgtgaatggcattgcc
cccctcccccgcagcctgcactcagctacacagataagtcacagaatgtttgtgtttggc
ggctgggttccgctggtgatggacgaccagaaggtggccacgcacgagaaggagtggaaa
tgcaccaacaccctggcctccctcaacctggaaacgatgacgtgggagcccctggctatg
gaggtatttgaggactctgtgccgcgagcccgcgccggacactgtgccgtgaacatcggc
agcaggctgtacgtgtggagcggaagggacggctacagaaaggcctggaacaaccaggtg
tgttgtaaggacctgtggtttttggagacagaaaagccgctggcccccaccagagtccag
ttggtacgagccagcaccaacaccctggaggtgtgctggggagcaatacagacagcggac
gcgtatctactgcagctacagaagtacgacatgccgccagcgcaggccgccactctgccg
aacgcggtcagtaaccctgccatggcctccaccccggcctccgcagccctgcaggggagc
ggcagtgccaccatgatccgccagatgtcctcgggaactggtcctgtcactgccggcatc
atgaaggcaccagggctgcagcctttacggatgcccacacagaccaccctggtcggcacg
gcaaccaccgccatgccccagcagtcgccgccggtgcggggtcgggcccgggtcaagtct
ccggtcgccgtgacgatggccagcagcccgaggatggcgaccagcaccaccaacccgcgt
atcctcaccacaaccacgtcccctgggaccctccccgctggcacaggcatgagcggaatt
caggcactggcggcggctgcagcggccacccagaagattcctgccagtccgtcaggcacc
accatgaggccacagctgtccactacccatacgggcacccccgtcaccctcactctagcc
tccggggttaaatccacccccattatgcaatatttttcaaaccaggtcaacacagcggct
accagcattctgaagaccgcggcgcaagcggcacaggcgggcgcacaacagcagcttcag
gggaagcagatcatcacggtacacaagtctggagccgtcacgctcaccccgcagacacag
gtggtcactaccgtggtgggaggagtcaccaagacggtcacgctggtcaagtctgtcccc
gtcactcttcagggagggaaggtgacgttgatccagaccaagcccctgagctccacaggc
atggtgctgggcaccaccccgcagggggccacccctggagtcagcaccatggcacggcag
ctgggacagctgcaggccaagggaccgctcccccagggaaccatcctgaaagtcatcagt
accacagcaggagggaagactgcctacatcacaactaccactcaggctgggacatcgaaa
ggcgcgaccatcatgggtatcagcagcgtgacccagcagccggtcgtcaccatccccaaa
accatcatcaagaccgtccccgtgtcatccgtcatgtcgagcatggccgggcagggcggg
gccacgggcggagccaccccgaccaaacccaccattatcgcaatcactaccaaggcagtt
actggggtggcaggtatgaccacagggaccaccagcaagcttccatccacatacatggtg
aagaaccccaccagccagggcagcacccagcaagtcgtccggaccgtcaccaccaccctg
ggggtcacccccatgggcacggtggtacggaccgtgacgtcacagatgcagccgggcgta
cggatcatcaccgttcccgcgtccagcatcacgacgaccaccacgcccacgggacaggtg
cagaggatcgtggtcacgcccgtcacaagaccgagcgccgccttgcaagggaaaacggga
accatcaccattgtcactccagcaggtacctcagttcctgcatccacaatcctctcctca
accagcgcgggagccactggtacatcgaggcccatcaccgtttccgtcgccaacctgccg
tccgcctcaaacgtgcccgtcaccatgactacggcgcaggcggcatcggcgctgtcggcg
gccacaagcatcacgccgacgggaatcacgctacagagtttgtccacacccacagcaacg
acacagatgaaacagatcatacagaacacacaggccatcacccctgccacctccactgtg
acctcagtagctgcctccaccagcgagcagggacagccaccggccagctctgcggagcag
ccgcaagttggaccctgcggcactattcatggctgtggtactgatgacgaagatgaggat
gcagagaagcccaagatcggcccatgtggaaccatccatggctgtggaaccgacgatgaa
gatgacgagaaatcaaaacccacaattggtccatgtggcactatacatggttgcgggact
gacgacgaagatgatgacaagtccaagccctcagaaggacccaaaattggcccttgtggc
accatccatggttgtggtacagacgatgaagatgatgacaagtcaaaaccagcagaacag
caaaaaataggtccatgtggaactatacatggttgtggtacggatgatgaagatgatgag
aagcctaaggtggggccctgcggaaccatccatggctgcggtacggatgacgagggagag
ggcgatgaccccacgccatccaccacgacacaggcagaccagacacaggaggaagcgatg
gacacgtcagcaccgtcccaaccacagacctcagcaacgtcaacagtagctaccagttct
acagcagtaacttcacaagccacactaatggagacagggcagacagcatcgtcctctgta
gaacagatggacaccacacctgcaacaacagctgcagctgtagcagaagcagaagccctt
gcagcagccaccacctctagtgtcatgaccccctccccctcagcggtggacggagcagca
gctgtcctcgccaccctggcagactccacgaccacgcctgtatccgccagtcaagcgggg
gcgacgcccgtcaacaatggtgccgtggccccatccctacctgccaatgtcacgacaaac
gggctcgggcctacagtggttaaaacagagccagacgtcaaatcagaggaccagaaggca
gtggacgcctcctctaagaccctcctgccagggaagcgggaacacaaccagtggtacgat
gtgggcatcttcaagggtacctccgcaaccgtgcagtactactacctgccttctgagaac
aaccagaagggcgaggatgacatcgatgtagtgaacgtaccagaccacagcatgctgaag
aagcaggagctcctgtccggtacagcgtacaagttccgcgtggccggcatcaacgcgtgc
ggcagagggccctggagcgagatctccgccttcaaaacctgcctgccaggctacccaggg
gcaccgtctgctatcagaatcagtaaaagcacagaaggagcgcacctatcctgggaggcg
ccggccaacacggcgggcaagatcctggaatactctgtctacctggccgtgaagagcacc
tccgcgtccacgccggacaccaagccgctcacgccgtcccagatggcgttcgtgagggtg
tactgcggccccagcgcctcgtgtacggtcaccaccagcacgctgtccaacgctcacatc
gactacacatccaaacctgccatcatcttcagaatcgcagccagaaacgacaagggctat
ggaccagcaactcaagtaaggtggctgcaggactcctccaaggatactaaggcagctaag
agagtcgctccctcagacagtaaatctggcaccaagaaggtgaagacggaaaaatga
DBGET
integrated database retrieval system
