Branchiostoma floridae (Florida lancelet): 118415800
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Entry
118415800 CDS
T01074
Name
(RefSeq) CDK-activating kinase assembly factor MAT1-like
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03022
Basal transcription factors
bfo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118415800
09124 Replication and repair
03420 Nucleotide excision repair
118415800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfo03021
]
118415800
03400 DNA repair and recombination proteins [BR:
bfo03400
]
118415800
Transcription machinery [BR:
bfo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
118415800
DNA repair and recombination proteins [BR:
bfo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
118415800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_2
zf-C3HC4_2
zf-RING_4
DUF2096_N
zf-UDP
TRAF3_RING
zf-RING_6
HAUS6_N
ApoLp-III
Motif
Other DBs
NCBI-GeneID:
118415800
NCBI-ProteinID:
XP_035676523
UniProt:
A0A9J7L7S1
LinkDB
All DBs
Position
1:complement(14164505..14182209)
Genome browser
AA seq
321 aa
AA seq
DB search
MDEAICPRCKTTKYRNPSMVLMVNTCGHTLCENCVETLFARGSGTCPECNISLRRNTFRI
QQFEDPFVDKEVDIRKRILKIYNRQEEEFTSLREYNDYLEEVETIIFNLSNNIDMELTKK
KVEEYQKSNKSNIQRNRSKLSKDEELMEQLIEEEQAYLQHSRQELVQQERREKQRKMRQR
EELLDNLEFSDLPAGLVLASHTARQEEEMEKKPAPTTQFSTGIRIGGGTSFLPVPKAVEA
ALYQYRPGTVDLLGPEPPQITLLEENGYMSHMRDSSQADMAGGYTTKLGCHRALQEAFCG
LYFVPHLTADSVGQEQDMELE
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggccatctgcccgcgctgtaagaccaccaaataccgaaacccgtccatggtg
ctgatggtcaacacttgtggacacacgctatgtgagaactgtgtggagacactgtttgcc
cgaggctcagggacgtgcccagaatgtaacatctccctcaggaggaacacattcaggata
cagcagtttgaagacccattcgtcgataaggaagtggatatcaggaaaagaatattgaaa
atctacaacagacaggaggaggagttcacaagtctcagggaatataatgactacctggag
gaggtggaaactatcatattcaacctatccaacaacattgatatggagctgaccaagaag
aaggtggaagaataccagaaaagtaacaagtccaatatccagaggaacaggagcaaactg
agtaaggatgaggagctgatggagcagctgattgaggaggagcaggcgtacctgcagcac
agcaggcaggagctggtccagcaggagaggagggaaaagcagaggaagatgagacagaga
gaggagctgttggacaacctggagttctcagacttgcctgctggtctggtgttggccagt
cacacagccagacaagaggaggagatggagaagaaacctgcaccaacgactcagttctcc
actgggatcaggatagggggagggacatccttcctacctgtcccaaaggcagtggaggca
gccctgtaccagtacagaccaggcactgtggacctgctagggccagaaccaccacagatt
acactcctggaggaaaatggctacatgtcccacatgagagactcgtcccaggccgacatg
gcgggaggctatacaaccaaactgggctgccatcgagctctgcaggaggctttctgtgga
ctgtactttgtacctcaccttacagccgacagtgtcggacaagagcaggacatggaacta
gaatag
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