Branchiostoma floridae (Florida lancelet): 118415864
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Entry
118415864 CDS
T01074
Name
(RefSeq) short transient receptor potential channel 4-like
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bfo04040
]
118415864
Ion channels [BR:
bfo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118415864
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GFIT
Motif
Pfam:
Ank_2
TRP_2
Ion_trans
Ank
PKD_channel
Ank_4
Fumarate_red_D
Motif
Other DBs
NCBI-GeneID:
118415864
NCBI-ProteinID:
XP_035676611
UniProt:
A0A9J7MR38
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Position
5:complement(11715426..11727205)
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AA seq
1129 aa
AA seq
DB search
MDWDDGFRGSNNRRPIRLPRASDQDSIGRGSVTSSSLHFGPKEGFVWSPGNEEVDPIYGD
PRTRDPVDSGPQNPQGWPGRHPPSAQGPAPVPNTVPYQAPGPTPSQPRPQSERQQPDDLP
PVDYESVDETNAAPEPPRYERAIRPKTALRRPGAPPSGRPSSKSGDTPKKKAPESIASTK
NDDIDNQSIDSTFSDIPNTANNKRAKILQNLGVPVRVVNEENLPNLHRQDGSDDEKEDEP
DDKEENKKTKEDEDDKNDDKEPPLDDRKFLPLVKTGGAEPQTDAPSGTYAALPEASPSNM
SSAGLDNLPQPDYADPNDLMLKPYTSLPDNIQDTDIKDPKGQFLFAVQNGDVEKTRALLE
RNAVRHEFDINTSDDVGRTAIELAVCNQHEDVVELLLYFNVNLGNSLLFAVDRGNCRLVE
RLIHYTKSTNNTGPPMSPKDSAFPPEVTPLVLAAQRNDYKVMRLLLFHHYTITPPPALIG
QRVLIQTSTRLNILRALCSPYYISLTSSDPFQTAFGLTGELNEMMVMDSQHAHEYRALAD
QCGDFAADLLGQVQDVDELVTVMSGEDWSKDREGAKGLCMQTMQLAASNNQIRFVNKDVS
QGLLLSMWAEKVKWWNRSPLLAQLLFGLLVSAVCPLLIIVYRMEAKSYVGEFIATPVTRY
ICEIGLRLWFVVFLLLATFRVDSSEATVLDTLNRQSRASPPSIVEWFILVWIAGMVIQMC
TNLWRYGARKHLASVWGAVEMILLLLLVTIIGLRGLAYGRYQFLDYDALPSWERFRIHWD
PFSPALVAEALMGPCLILSVIRMIPFGILNRHIGPFLMALKELVRNIIMLGLLYFLILFS
FAWTLYYLYWYYTTGHEITCTEGTDYHVTVNETYVNSSFTLGAVPCGTPHPFGSMENSLG
ALFFAGFFIIDPTPLDLTLTRNGTVIGYGSLMTYGTGVTIYYLYIVLQWILALSVIGVLA
GSFRKPEKEDWIFARSKFMLQYFGRQWNPPAPFNLVPTPRGLARTVTAFRCSKFNPVPMA
KIPRLRDHEARYRLVVQRLVKRFVARTEPYDGNVGGVLSKLEQVHRSTRRTEHALLKGCY
GGNRPTVVNKKQNNNNYRRSSTNNNNRFYDIPAEDYDNLVRRNGDATAM
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atggattgggacgacggcttccgcggtagcaacaaccggcgccccatccgactccctcgc
gcgtcagaccaggactcgataggccgtgggtccgtgacgtccagctctctccacttcggg
ccgaaggaaggctttgtctggagtccgggaaacgaggaagtagatccgatatatggggat
cctcggactagggacccggtggattcaggaccgcagaacccgcaaggttggccgggtagg
cacccgccttcagcacaagggccggctcctgttccaaataccgtgccatatcaggctcct
gggcccaccccgagccaaccaaggccgcagagtgagcgtcaacagccggacgacttgccg
ccggtagactatgagtctgttgatgaaaccaacgcggcccccgagccacctaggtatgag
agggcgattcggccgaaaacagcattacggcgtcctggtgcaccaccctccggtcgtcct
tctagcaagtcaggggacacacccaagaagaaggcgccagagagcatcgcgtctaccaag
aacgacgacatagacaaccagtctatagactccacgttcagcgacattcccaacactgca
aataataaacgggcaaagattctccaaaaccttggcgttcccgtgcgagtggtgaacgaa
gaaaacctgcccaatctgcatcgtcaggatgggtccgacgacgagaaagaggacgaacca
gacgataaagaagagaacaagaagacgaaggaagatgaagacgacaagaatgatgataaa
gagcctcctttggatgatcgaaagttcctcccgttagttaaaactggtggagctgagccg
caaaccgatgctccctcgggaacatacgcagctctgcccgaggcaagcccgagcaacatg
tcctccgccggcctagacaacctgccgcagcctgactatgcagacccaaatgatctcatg
ctgaagccttacaccagcctcccggataacattcaggatacggacatcaaggacccgaag
ggacagttcctgttcgccgtgcagaacggagacgtggagaagaccagggcgctgttggaa
cggaacgccgtcaggcacgagttcgacatcaacaccagcgacgacgtgggtcgcacggcg
atagagctggcggtgtgtaaccagcacgaggatgtggtggagctgctgctgtactttaac
gtcaacctgggcaactcgctgctgttcgcagtggaccgcggcaactgtcgtctggtggag
aggctcatccactacaccaagagcaccaacaacactggacctcccatgtcacccaaagac
agcgccttcccaccggaagtgacgccactcgtcctggcagcgcagagaaatgactacaag
gtcatgcggctcctgctgttccatcactacactataacaccgcctccggccctgattggc
cagagagtcctgatccagacgagtacgaggctgaacatcctccgcgccctgtgcagtccg
tactacatcagcctcaccagcagcgaccccttccagactgccttcgggctcactggggag
ctgaacgagatgatggtgatggactcgcagcacgcgcacgagtaccgcgcgctggcggac
cagtgcggcgacttcgcggcggacctgctgggccaggtacaggacgtagacgagctggtg
acggtcatgagcggggaggactggagcaaggacagggagggcgccaaggggctgtgtatg
cagaccatgcagctggcggcctccaacaaccagataaggtttgtgaacaaggacgtgtcc
cagggtcttctcctgtccatgtgggcggagaaggtgaagtggtggaaccggtcgcccctc
ctggcgcagctgctgttcggcctgctggtgtccgccgtctgccctctcctcatcatcgtc
tacaggatggaggccaagtcttacgtcggagagttcatcgcgactcccgttaccaggtac
atctgtgagattgggttgagactgtggtttgtggtgtttctcctgttggctacctttcgt
gtggacagcagtgaagccacggtgttggacacactcaacagacagtcacgagcttcgccc
ccatctattgtggaatggttcattttggtttggatcgctgggatggtgatacagatgtgc
accaacctgtggcgttacggcgctcggaagcacctggccagcgtctggggtgcggtagag
atgatcctcctgctcctgctcgtcacgatcataggtctgcggggcctggcgtacggacgg
taccagttcctggactacgacgcgttgcccagctgggagcggttccggatccactgggat
ccgttttcccccgccctggtggccgaggcgctgatgggcccctgcctcatcctgtccgtc
atccggatgattccgttcggcatcctcaaccgtcacatcgggcccttcctcatggctcta
aaggagttggtgaggaatatcataatgctgggcctactttacttcttgattctgttctcc
ttcgcctggaccctgtactacctgtactggtactacaccactgggcacgagatcacctgc
acagaagggaccgactatcacgtgaccgtgaacgagacttacgtcaacagcagcttcacc
ctgggggccgtgccctgtggtacgcctcatccgttcggcagcatggagaactctttgggg
gccctgttcttcgctgggttcttcatcatcgaccccacaccattggacctgaccttgacc
cggaacggcacagtgattggctatggttccctgatgacgtatggcacgggcgtcaccatc
tactacctgtacatcgtgctgcagtggatcctggcgctcagcgtcatcggcgtgctggcc
gggtctttccggaaacccgagaaggaggattggattttcgcccgctccaagttcatgttg
cagtacttcgggcgccagtggaaccctcccgctcccttcaacctggtccccaccccccgc
gggctggccagaactgtcacagcgttccgctgttccaagttcaaccctgtgcccatggcc
aagatcccacgactgagagaccacgaggcacgatacaggttggttgtccaacgtctggtg
aaacgcttcgtcgcgcggactgaaccatacgacgggaacgtagggggcgtcctgtccaag
ctggaacaagttcaccggtcaacgcggaggacagagcatgcgctgctgaaaggctgttac
ggtggtaacagacctacagtggtaaacaagaaacagaacaacaacaactatcgccgaagc
agcaccaacaacaacaataggttctatgacataccagcggaggattatgataatttggtt
cgtcggaatggagatgctactgccatgtaa
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