Branchiostoma floridae (Florida lancelet): 118416178
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Entry
118416178 CDS
T01074
Name
(RefSeq) short transient receptor potential channel 4-like
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bfo04040
]
118416178
Ion channels [BR:
bfo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118416178
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ank_2
Ank
Ion_trans
Ank_4
DUF1576
Ank_KRIT1
Motif
Other DBs
NCBI-GeneID:
118416178
NCBI-ProteinID:
XP_035677150
UniProt:
A0A9J7MS31
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Position
5:11828073..11832096
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AA seq
538 aa
AA seq
DB search
MKNRRNMRYFRRKVAPIRKRRVHCIDGFLPRKNGHLEEVEAMLRDNLDDLSFIIDCLDPC
GRSAVELATIRGNQEMVETLLRHGADLGDSLLYAVDLEKEDIVTALLTHTWPVNDTKKGT
PRESLYPPHITPVLLAAHRNNYSILKLLLDQQFPLPSIGDVSGSTDHRAKLDYYRAVTSP
SYILLTSQDPFETAFKIKEELNNIVSCLETGRRELQKISVRLEEFIAELINFARCPEEVE
TVLNGGDNMEDIAGLRMRQLQKAIEVGYKKFVADDKCQELLNLQFYRRHTWMLHSSKWKK
NLAILMLEILTPVLAVVYLVIPETGLGQSIASPVAKYSMKVWSWGVFVGFMRSISGAERL
LIGTYWCWVLGITWEKMKEVWTASVDAWNKWDLLLLLCHMTATGCFVGGIFAITRDRSLA
LSSDEMHPHFIGVYLLAIAVILSFARYMSMLMFSETIGPLLLSMYKMVGDIFKFLIVFLI
IIVGFGTALQRLYSSPRPDSECLLKYYQAVQDQAQANNTNLNFTAYDFCDYGQFAQYV
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacaggcggaacatgagatattttcggaggaaagtcgctcctatccgaaagaga
agagtccactgcatagacggtttcttgcctcgtaaaaatggacaccttgaggaggtggaa
gcgatgttaagagacaaccttgacgacttgtccttcatcatcgactgcctggacccatgt
ggccgttctgctgtagaactggcgacgatccggggtaaccaggagatggtggagacatta
ctgagacatggagcggacttgggagactcgctactgtacgctgtggacttggagaaggaa
gacatcgtgacagccttgctgactcatacctggccagtaaatgacactaagaagggcaca
cccagagaatcgctgtatcctccacatatcacacctgtcctcctagcggcgcatcgcaac
aactacagcatcctaaaactcctcctggatcagcagttccctctccccagcattggtgac
gtcagcggttcgactgaccacagagccaagcttgactactaccgcgccgtcaccagccct
tcttacatcctcctcaccagccaagaccccttcgaaaccgccttcaagatcaaggaggaa
ctgaacaacatcgtctcttgtcttgagactggaagaagggaacttcaaaaaatctctgtc
cgtcttgaggagttcattgcggagcttataaatttcgccaggtgtcccgaagaagtggag
accgtcttgaatggtggggacaatatggaggacatcgcaggattgcgcatgcgtcaactt
cagaaagctattgaagtaggatataagaagttcgtggcggatgacaagtgtcaggagttg
ctgaatctgcagttctaccggcgccatacctggatgttgcacagctccaaatggaagaag
aatcttgccattttgatgttggaaatcttaactccggttttggcagtcgtgtacctagtc
atcccagagactggtctgggacagagtatcgcctcgcccgttgctaagtacagcatgaag
gtctggtcgtggggcgtgttcgtgggctttatgagatcaattagcggtgctgagagactt
ttgattggaacctactggtgctgggtgctcggtataacctgggagaagatgaaggaggtt
tggactgcatcagtggacgcctggaacaagtgggacctgctgctgctcctgtgtcacatg
acagctacaggctgctttgtaggcggcatctttgccatcacaagggaccgcagtcttgca
ctcagttcagacgagatgcacccacacttcatcggtgtgtacctgctggcgatagcggtc
atcctcagcttcgcccggtacatgagcatgttgatgttctccgagactatcggtccgctc
ctgctatccatgtacaagatggttggggacatcttcaagttcctcatcgtgtttctcatc
atcatcgtcgggtttggcaccgctttacaacgcctgtatagttcacccagaccggattca
gagtgcctcttgaagtattatcaagctgtccaagaccaagcacaagccaacaacaccaac
ctcaattttaccgcctatgacttctgtgattatgggcaatttgcacagtatgtctga
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