Branchiostoma floridae (Florida lancelet): 118416287
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Entry
118416287 CDS
T01074
Name
(RefSeq) TATA-box-binding protein 2-like
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118416287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bfo03000
]
118416287
03021 Transcription machinery [BR:
bfo03021
]
118416287
Transcription factors [BR:
bfo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
118416287
Transcription machinery [BR:
bfo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
118416287
RNA polymerase III system
TFIIIB
118416287
RNA polymerase I system
SL1/TIF-1B
118416287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-GeneID:
118416287
NCBI-ProteinID:
XP_035677272
UniProt:
A0A9J7L6Y4
LinkDB
All DBs
Position
1:13350970..13355548
Genome browser
AA seq
329 aa
AA seq
DB search
MDGTPFRQDQPQVRPGFQVQPQFGVTYTTQLPPSQFLPPPPPASEPMLQTMPTSELQNQP
VSGSLVPDMTTVRTQMHYQPGQQQQDKANSQNKSQEHSQPSSGLTPGFSNTPGVPHSHSH
SSSGGTSSLYPATPAPMTPMTPATPAEGSGIVPQLQNIVSTVNLGCKLDLKKIALHARNA
EYNPKRFAAVIMRIRDPRTTALIFSSGKMVCTGAKSEDQSRLAARKYARVVQKLGFPAKF
LDFKIQNMVGSCDVKFPIRLEGLVLTHAQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKV
VLTGAKVREEIYEAFETIYPILKGFRKTS
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggacgggacacccttcagacaggaccagccacaggtcaggccaggttttcaggttcag
ccccagtttggtgtgacctacaccacccagctgcctcccagccagttcctacctcctcct
ccacctgcatcggagccgatgttacaaaccatgccgaccagtgagctgcagaaccagcct
gtgtccgggtcactggtaccagacatgaccactgtacgcacacagatgcactaccagcct
ggtcagcagcagcaggacaaggccaacagtcagaacaagtcccaggaacattcccagccc
agctcaggcctcacgcccgggttcagtaacactccaggggtgccacattcacacagtcac
tccagttctgggggtacatcatccctgtacccggccacacctgcccccatgaccccaatg
acgcctgcaaccccagcagaggggtctgggattgttcctcaattacagaatattgtttcc
actgtgaacctgggttgcaagctggatctgaagaaaattgcacttcatgccagaaatgca
gagtacaatccaaagcgttttgcagcagtgatcatgagaatccgggacccgagaacaaca
gccctgatcttcagctcaggcaagatggtgtgcacaggagcaaagagtgaggaccagtcc
aggcttgcagccaggaaatatgccagagtggtacagaagttgggcttccctgcaaagttt
ctggactttaagattcagaacatggtgggcagctgtgatgtcaagttcccaatcagacta
gaggggctggtcctcactcacgcacagttctcaagttatgagcctgagctttttcctggc
ctgatctaccgtatggtcaagcccaggattgtgctgctcatctttgtctcagggaaggta
gtactgactggtgcaaaggtgcgagaggagatttatgaggcatttgagacgatctaccct
atccttaagggcttcaggaagacatcttga
DBGET
integrated database retrieval system
