Branchiostoma floridae (Florida lancelet): 118416338
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Entry
118416338 CDS
T01074
Name
(RefSeq) short transient receptor potential channel 4-like
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bfo04040
]
118416338
Ion channels [BR:
bfo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118416338
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ank_2
Ank_3
Ank
Ank_5
Ank_4
PKD_channel
Ion_trans
Topo_VI_alpha
YVC1_C
Motif
Other DBs
NCBI-GeneID:
118416338
NCBI-ProteinID:
XP_035677321
UniProt:
A0A9J7L7D7
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Position
5:24318007..24323815
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AA seq
472 aa
AA seq
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MEQRLFEAAEKDDVIQLLDILQSGSREGSSLDIDCRNDFGQSALDVAVDAGSLSAAGALL
DNGARVGGAILYAVDRQHLAAVRLILDKRTAEDVMDSLENEKECDHSCMFSPDMTPLVLA
AHHNNYRLLKLLLGGGFTLPAPSTFSWASGVRQSSAWLSTYQAMCSPYYILLTSDDPFSA
AFTTARTLRDVCWKRENYRGLLEEMAGRCETFAAELLDEVRDSEELEAVLGYSRGDQQPP
YTTLEMAVDFKQKKFVSHHLCQEYGLLLDLPAAEWESWSRMYVIIFNLTLCLFCPLLCLI
HVIAPKTTAGKLASIPYIRDLFWSVSEVLMLVVVRWEAEYQVGLEDISRIARGDPTPAVI
VSTPQILIMVWVLGLLIEELQEIWYQGLRYHLTRLWNLLDFAILATYITQLVLRATSFTW
WDRYVTENMADDWVVQTNPYTFQPVMIAEGLFAVFTVLVVLRAMGICSLSRL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggagcagcgcctgtttgaggccgccgagaaagatgacgttatccagctgttggacatc
ctgcaatcggggtcacgggaggggtcatcgctggacatcgactgccgtaacgacttcggc
cagtcggcgctggacgtggccgtggacgccggaagcctgtcggcggccggggccctgctg
gacaacggggccagggtgggaggcgccatcttgtacgccgtggacaggcagcacctggcg
gccgtccggctgatcctggacaagaggacggcggaggatgtgatggatagtttggagaat
gagaaggagtgcgatcacagctgcatgttttctcccgacatgacgccccttgtgctggcg
gcccaccacaacaactaccggctcctgaagctcctgctgggcgggggcttcaccctgccg
gccccgagcaccttctcctgggcgtccggcgtcaggcagtctagcgcctggctcagcacg
taccaagcgatgtgcagcccctattacatcctcctcacgtcggacgacccgttctctgcc
gccttcaccacggccaggacgctgcgagacgtctgctggaagcgggagaactaccggggc
ctgctggaggagatggcgggccgatgtgagaccttcgccgccgagctgctggatgaggta
cgggactccgaagagctggaggctgtgctggggtacagcagaggtgatcagcaaccccca
tacacaaccttggagatggcagtggactttaagcagaagaagttcgtgtcgcaccacctg
tgtcaggagtacggcctgctgctagacttgcccgccgcggagtgggagtcctggtcccgg
atgtacgtcatcatcttcaacctgacgctgtgtctgttctgccccctgctgtgccttata
cacgtcatcgcacccaagactacggcagggaagctggcctccatcccgtacatccgtgac
ctgttctggtcggtgtctgaggtgctgatgctggttgtagtgcggtgggaggcggagtac
caggtgggactggaggacatcagcaggatcgcgcgcggggaccccacccctgccgtcatc
gtctccactccgcagatcctcatcatggtctgggtgctaggtctgctgatagaggaactg
caggagatctggtaccaggggctccggtatcacctcacccggctgtggaacctgctggac
ttcgccatcctcgccacctacatcacacagctggtgctgagggccacctcttttacttgg
tgggaccgttacgtcacagagaatatggcggatgactgggtggtccagacgaacccgtac
accttccagcccgtgatgatcgcggaggggctgttcgccgtcttcaccgttctggtggtg
ctccgggccatgggcatctgcagcttgagcagattgtga
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