Branchiostoma floridae (Florida lancelet): 118416518
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Entry
118416518 CDS
T01074
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-3-like isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04080
Neuroactive ligand-receptor interaction
bfo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118416518
04082 Neuroactive ligand signaling
118416518
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bfo04040
]
118416518
Ion channels [BR:
bfo04040
]
Ligand-gated channels
GABA-A
118416518
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
118416518
NCBI-ProteinID:
XP_035677533
UniProt:
A0A9J7L7D0
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Position
5:complement(24398841..24408848)
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AA seq
542 aa
AA seq
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MRLSPPNSGRYPPAKKGNVRWASGNAKCITRKMAASSLTTSFPTIIILLLLSTCLIGSCS
AQSGVRSAGVEPASSPTIAAADSSLAEVLKNYDRNIRPNFGGPPVRVGLTMSIASIDSIS
EVNLDYTITVLLRQFWKDPRLAQPWLANKTRPMSLDGRLAEDLWVPDTFLTNAKEAFMHT
VTTDNVLIRLYPDGSVIYGMRITAVAHCYMNLRKYPLDEQNCTLEFESYGYTTEDLQLYW
MRGDESISGLQSVNEDMQTFQVGAYLTAERVAHYETGEYGVAVFKFHLSRRILYFLMQTY
IPAALIVMISWVGFWVNPYSEPARVGLGITTVLTMTTFITSARASVPRISYVKAIDVYLI
ICFLFSFGALIEYAIVNYTTLVRQKKETKRIPLTPLVVTDIQPSPVTPTGNDMQMVEVGN
DVRDAPLATVSEADMDYENPSDAASTPSDDSGMGRQPFGNIRYRVRDRVRDTVKARTTQA
GHRVRQTTSRVRRRVGKILDDECIIDRRSRYLFPIAFTLVNLVYWFTYIYVDMKDDKIER
DF
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgcggctgtcaccaccgaacagcggcaggtatccccccgctaaaaagggaaacgtgaga
tgggcctcaggcaacgcaaaatgcatcaccagaaaaatggccgcttccagcttaacgacg
tcgtttccaactattataatcttacttttactttccacgtgcctaataggcagctgcagc
gctcaaagcggggtaagatcggccggggtggagccggcttcttctcccaccattgcagca
gcagattcctctctggcagaggtcctgaaaaactatgacagaaacatacgtcctaacttc
ggaggtccgcctgtgcgggttggtctcaccatgagcatagccagcattgacagcatttcc
gaggtcaacctggactacaccatcaccgttctcctgagacagttctggaaagacccgaga
ctagctcaaccctggctggcaaacaaaactcggcccatgagcctagacgggcggctggca
gaggacctgtgggttcccgacacgtttctgaccaatgcaaaggaagccttcatgcacacg
gtcacaacagacaacgtgctaatcagactgtaccctgacgggtccgttatctacggaatg
aggatcacggctgtcgcgcattgttacatgaacctgcggaaatatccgttggacgaacag
aactgtacactggagttcgagagttacgggtacaccacggaggacctgcagctctactgg
atgcggggagacgagtccatctccgggctgcagtccgtgaacgaggacatgcagaccttc
caggtgggggcctacctcacggcggagagggtcgcgcactatgagacaggagaatacgga
gtagccgtcttcaagttccacctgtcgcgaaggattctgtatttcctgatgcagacctac
atcccggccgccctcatcgtcatgatctcctgggtcggcttctgggtcaacccttactcc
gagccggcccgagtgggactcggtatcactacggtgttgaccatgacgaccttcatcacc
agcgcgcgagcctccgtgcccaggatctcctacgtcaaggccatcgacgtctacctcatc
atctgcttcctcttctccttcggcgcgctgatcgagtacgctatcgtcaactacaccacg
ctcgtcaggcagaagaaggagaccaagaggatcccgttaacaccgttggttgttacagac
atccaaccatcgccggtgacaccgacaggaaacgacatgcagatggtagaagtgggcaat
gacgtgagagacgcgcctttggcgaccgtgtcggaggcagatatggactatgagaacccg
tctgacgccgccagcacaccatcagacgacagcggcatgggcagacaaccgtttggaaac
atccggtacagagtaagagacagagtgagagacactgtcaaggcgaggaccacccaggca
ggacacagagtcaggcagacaaccagccgggtcagacggagagttggcaaaattttagat
gatgaatgcataatagacaggaggtcgagatatctgttcccgatagcgttcacattggtc
aaccttgtgtattggttcacgtacatatatgtagacatgaaagatgacaagatagaacgt
gacttttag
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