Branchiostoma floridae (Florida lancelet): 118416989
Help
Entry
118416989 CDS
T01074
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1-like isoform X1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
bfo04812
]
118416989
Cytoskeleton proteins [BR:
bfo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
118416989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Katanin_con80
ANAPC4_WD40
NBCH_WD40
eIF2A
PROPPIN
PD40
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
118416989
NCBI-ProteinID:
XP_035678192
UniProt:
A0A9J7L8V2
LinkDB
All DBs
Position
6:16882417..16901954
Genome browser
AA seq
658 aa
AA seq
DB search
MAATKRAWKLQEFVAHGSNVNCLALGYKSGRVMVTGGEDKKVNMWAVGKPNCIMSLSGHT
SPVECVRFGNAEELVVAGSQSGSLKIWDLEAAKIVRTLTGHKSNIRSLDFHPYGEFVASG
SMDTNIKLWDVRRKGCIFTYKGHTDAVNCIRFSPDGRWIASAGEDSSLKMWDLTAGKMIQ
EFKDHTGPVTGVEFHPNEFLLASGSADRTVKFWDLETFQLVSSTGAESGAIRCIFFHPDG
KCLFGGSQDALRVFAWEPGRCLDAFSMGWGKVADISVASSQLIGASFSQTNVSVYIVDLN
TVTCSPSQIKRAQMSGPGMVSQPVPAEPVKPPMSASGRRTFITERPPTSSTKKASEMKTE
PEEEPTASNEPEDDSSNVAQIENPDDYREVFQGRTKIERTPPRKLEPFPAPPEDSPTEDQ
SKAKPYKQPAKEPKAKQEPVKPATIVPADRNKPADLNLAEFLPKRPDSAVSADPRRPPAV
QEQSEEEVLSSVHKGHESMCAVLGNRHRNLEIVRALWTSGDIKTSVDSAVGMKDLSVMVD
LLNVLILKHSLWTLDLCTVLLPQIQELLSSKYESYCHTACNALKIVLRSFSSIIKTNVQA
PPAGGGVDISREERYKKCKVCHGHLMSIRGLVEKKQSMSGKLGSTFRELQIMLNGLDD
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaccaaacgagcatggaagttacaggaatttgtggcccatgggtccaacgtg
aactgcctggccctggggtacaagtcaggccgggtcatggtcactggaggagaggacaaa
aaggtcaacatgtgggcagtgggcaagcccaactgtatcatgagcctgtccggacacacc
agtcctgtggagtgtgtgaggtttgggaatgctgaggaactggtggtggctggctcacag
tctggatctctcaaaatctgggacctggaggctgcaaaaatcgtacggacgctgacgggg
cacaagtccaacatcaggagcctggatttccatccatatggagagtttgttgcttccggg
tcaatggacaccaatataaagttgtgggacgtcagaagaaaaggctgcatctttacttac
aagggccacacagatgctgtaaactgtatccggtttagtccagatgggaggtggatagct
tcagctggggaggactcctctctcaagatgtgggacctgacggcagggaagatgatccag
gagttcaaagatcacacaggccctgtaactggggtggagttccaccctaacgagttcctg
ctggcttcaggaagtgcagacaggactgtgaagttctgggacttagagacattccagtta
gtttcttccacaggagcagagtctggagctattaggtgtatatttttccatcctgacggg
aagtgtctgttcggagggagtcaggacgccctgagagtgtttgcgtgggagcctggcagg
tgtttagatgccttctccatgggctgggggaaggtggccgacatttccgtcgcatcctca
caattgataggagcatccttctctcaaaccaatgtatctgtgtatattgtagacctaaat
actgtgacttgcagtccctctcaaataaagagagcccagatgtcaggtcctgggatggtg
agtcagcctgtccctgctgagcctgtcaaacccccaatgtcagcaagcggccgtcgcacg
ttcatcaccgaacgtccacctacctcctccaccaagaaagccagtgagatgaagacagaa
ccagaggaagagccgaccgcgtccaacgagcccgaggatgacagctccaacgtggctcag
atcgagaacccagacgactatcgggaggtctttcagggcaggaccaagatagagcgaacc
cccccaaggaaacttgagcccttcccggccccaccggaagattccccgacggaagatcag
tctaaagcaaaaccatacaaacagccagcaaaggagccgaaagcaaaacaggaacccgtc
aaacctgccaccatcgtcccagcggataggaacaaaccagcagacctcaatttggctgag
ttcctaccgaagagaccagactcagcggtgtcggctgaccccagacgacccccagcggta
caggaacagtcggaggaagaggtcctgtccagcgtacacaaggggcacgagtccatgtgt
gccgtcctgggcaacaggcaccgcaacctggagatcgtcagggcgctctggaccagcgga
gacatcaagacttcagtagactctgctgttggaatgaaggacctgtctgttatggtggat
cttctgaatgtactcatcctcaaacactccttgtggactctagatctatgcacagttttg
ctgcctcaaatccaggagctcttgtcatccaaatatgagagctactgccacacagcctgt
aatgccttgaagattgtcctgcgcagcttcagctctatcatcaagaccaacgttcaagct
cctccagcggggggtggggtcgacatatccagggaggaaagatacaagaagtgtaaggtg
tgccacggccacctcatgtccatccgtgggctggtggagaagaaacagtccatgtctggg
aaactgggcagcaccttccgtgagctgcagatcatgctcaacggtctggacgactaa
DBGET
integrated database retrieval system
