Branchiostoma floridae (Florida lancelet): 118417008
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Entry
118417008 CDS
T01074
Name
(RefSeq) serine/arginine-rich splicing factor 4-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118417008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bfo03041
]
118417008
Spliceosome [BR:
bfo03041
]
Common components
Common spliceosomal components
SR proteins
118417008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_3
OB_RNB
Motif
Other DBs
NCBI-GeneID:
118417008
NCBI-ProteinID:
XP_035678220
UniProt:
C3YFE9
LinkDB
All DBs
Position
6:complement(18328608..18337195)
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AA seq
289 aa
AA seq
DB search
MGSRVYIGRLPYHAREKDVERFFRGYGRIREINLKNGFGFVEFDDPRDADDAVYELNGKE
LCGERVIVENARGPARGGGGFRGGGYGYRPGWLDNGRGSGGGRGSDSRNRYGPPVRTDYR
LIVENLSSRCSWQDLKDYMRQAGEVTYADAHKQNKNEGIVEFATYRDMENALRKLDGTEI
NGRKIKLVEDRPSRRRRSYSRSRSRSRSRSRSRSRSRSRSRSPRSRSRSRSRSHSRSRSR
SHSRSKSRDKSASRSPAKDTQVKQSKSKSRSKSRSKSRERSGEEDNKDE
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgggtagtcgtgtctacattggacggttgccctaccacgccagagaaaaagacgtcgag
agatttttcagaggctatgggagaatcagggaaatcaacttgaaaaacggcttcggcttt
gttgagtttgatgaccccagggatgcggatgatgctgtgtatgaactgaacggcaaggag
ctgtgtggggagagggttattgttgagaatgcccgtggtcccgccaggggtggaggcggt
tttcgcgggggaggctatggctatcggcctggctggctagacaacggccgaggcagtgga
ggcggccgggggtcggatagcaggaacagatatgggccacctgtccgcactgactaccgc
ctgattgtggagaacttgtcgagtcgctgtagctggcaggacttgaaggactacatgcgg
caggctggagaggtcacctatgctgatgcgcacaagcagaacaaaaatgaggggattgtg
gagtttgccacataccgtgacatggagaacgccctgcgaaagctggatggcactgagatc
aatggtcgtaagatcaaactggtggaggacaggccatcaagaaggcgcaggtcttactca
cgctctcgttctcggtccaggagccgaagccgcagtcgctcgcgctcccggtccagaagc
cgctccccgcgcagccgcagccgatcccgcagcaggtcccactcccggtctcgcagccgc
tctcactcccgcagcaagagcagggacaagtccgccagccgctccccggccaaggacacg
caggtcaagcagtccaagtcgaagtcacggtctaagtcgcgatccaagtcccgtgagcgt
agcggggaggaggataacaaggacgagtag
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