Branchiostoma floridae (Florida lancelet): 118417072
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Entry
118417072 CDS
T01074
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118417072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfo03021
]
118417072
03041 Spliceosome [BR:
bfo03041
]
118417072
03036 Chromosome and associated proteins [BR:
bfo03036
]
118417072
Transcription machinery [BR:
bfo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
118417072
Spliceosome [BR:
bfo03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
118417072
Complex B
118417072
Complex C
U2 SnRNP specific factors
118417072
Chromosome and associated proteins [BR:
bfo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
118417072
TFTC complex
118417072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Motif
Other DBs
NCBI-GeneID:
118417072
NCBI-ProteinID:
XP_035678338
UniProt:
A0A9J7L8R4
LinkDB
All DBs
Position
6:complement(15091178..15145440)
Genome browser
AA seq
1215 aa
AA seq
DB search
MFLYALTLQRATGVTHAIHGNFSGTRQQEIITSRGKILELMRPDPNTGKIHTLLSVEIFG
VIRSLMSFRLTGGTKDYIVCGTDSGRIVILEYLPAKNKFDKVHQETFGKSGCRRIVPGQY
LAVDPKGRALMIGAVEKQKLVYILNRDAAARLTISSPLEAHKSNTLCYHLVGVDIGFENP
MFACLEIDYEDADNDPTGESSQSTQQCLTFYELDLGLNHVVRKYSEPLEEHGNFLIAVPG
GSEGPSGVLICSENYITYKNFGDQPDIRSPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIKLKYFDTVPVATSMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFLFTPRGLKNLVLVDEMDSLSPIMSCQIADLANEDT
PQLYVANGRGPRSSFRVLRHGLEVSEMAVSELPGNPNAVWTVKKNVDDEFDAYIVVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLIGEDALLQIYPEGIRHIRSDKRVNEWRTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKEMSAEVICMALANVPVGEQ
RCRFLAVGLTDDTVRIISLDPADCLQPLSMQALPATPESLCILQMGGGEGIDDTGPRNTM
LFLNIGLQNGVLLRTVLDQITGDLSDTRTRYLGSRPVKLFQVKMQGNEAVLAMSSRSWLS
YTYQNRFHLTPLSYETLEYASGFASEQCPEGIVAISANTLRILALEKLGAVFNQISTPLM
YTPRKFVIDTQSNNIIMIETDHNSYTEATKAQRKQQMAEEMVEAAGEEEKELAAEMAAAF
INENLPEATFGSPKAGPGMWASVIRVLNPIQGNTLDLIQLEQNEAAFSIAICKFANRGED
TFVVVGTAKDMTMNPRTCSGGFLHTYQLVNNGEKLELIHKTPVEDVPGAISSFQGRILVG
IGRLLRIYDLGKKKLLRKCENKHVPNFIMSIHTMGHRIFVSDVQESFHFIRYKRQENQLI
IFSDDTNYRWITCSTQLDYDTVAAGDKFGNLSMVRLPAGVTDEVDEDPTGNKALWDRGLL
NGASQKADVICNYHVGEVVTSVQKATLIPGGSESLVYTTISGGVGILVPFTSHEDHDFFQ
HLEMHIRSEHPPLCGRDHLSFRSYYYPVKNVIDGDLCEQFNSMEPSKQKSVAEELDRTPA
EVSKKLEDIRTRYAF
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgtacgcgctgacgttacagcgtgccacgggcgtcacccacgccatccacggg
aacttctccggcacacgacagcaggagatcatcacgtcacgggggaagatcctcgagctc
atgcgtccggacccgaacacgggaaagatccacacgctcttgtcggtggagattttcggc
gtcatacgatcgctgatgtcgtttagattaacaggtggaacaaaagactacattgtatgt
ggcacagattcaggaagaattgtcatccttgaataccttcctgccaagaacaagtttgac
aaggtccaccaggagacgtttgggaaaagtggttgcaggagaatcgtacctggacagtac
ctagctgtggaccccaaaggcagagcactcatgattggtgctgtagagaagcagaagttg
gtgtacatcctgaacagagatgctgcggccagactgaccatctcctcccccctggaggcg
cacaagtccaacaccctgtgttaccatctggtgggggtggacatcggctttgagaacccc
atgttcgcttgtctggagatagactacgaggacgcagacaatgaccccacaggagagtct
tcccagagcacacaacagtgtctcacgttctacgaacttgaccttgggctgaaccatgtt
gttaggaagtacagcgaaccattggaggaacacggaaacttcctcatcgcagtccctgga
ggtagtgaggggcccagtggagtcctgatctgctcagagaactatatcacctacaagaac
tttggagaccagcctgacatcagatcacccatccccagaagaagaaatgaccttgatgac
cctgagcgcggcatgatcttcgtgtgcagtgccacccacaagaccaagtccatgttcttc
ttcctggcacagacagaacagggggatatcttcaagatcaccctggagacagatgaggat
atggtgacagagataaagctgaagtattttgacacagtcccagtagcaaccagtatgtgc
gtgctcaagactggcttcctttttgtagcttcagaatttggaaatcactacctgtatcag
attgcacacctgggtgatgatgatgaagagcctgagttcagctcggccatgcccctggag
gagggggacaccttcctgttcacccccagggggctcaagaacctggtgttggtggacgag
atggacagcctctcacccatcatgtcctgtcagattgcagatttggccaatgaggacaca
ccgcagctgtatgtggccaatgggaggggcccacggtcatccttccgggtactgagacac
ggtctggaggtgtcagagatggccgtgtcagaactgcccggtaacccaaatgctgtgtgg
acggtcaagaaaaatgtggacgatgagtttgacgcgtacatcgtggtgtccttcgtgaac
gccaccctggtactgtctatcggagagaccgtggaggaagtgacggattcaggcttcttg
ggtaccactcccacgctgtcctgctcactgattggtgaagatgctcttcttcagatttac
ccagaaggcatccgccacatcaggtcagacaaacgtgtgaacgagtggagaacgcccggc
aagaaaaccatcgtcaagtgtgcagtgaaccagagacaggtagtgatagccttgactgga
ggcgagctggtgtactttgagatggaccctactggtcagctaaacgagtacacagaacgt
aaggagatgtcagcagaagtgatctgtatggcgctggctaacgtgccagtaggggagcag
cgctgcaggttcttagctgtcggtctcacggatgacaccgttagaatcatctccctcgac
cctgcagactgcctgcagccattgagtatgcaggccctcccagccaccccggagtccctg
tgtatcttacagatgggagggggagagggcatcgacgacaccgggcccaggaacactatg
ctgttcctcaacattggcttacagaatggtgtgctcctgagaacagtgcttgaccagata
acaggagacctgtcggacacgcgcacacggtacctcggttcccggcctgtcaaactcttc
caagtcaagatgcagggcaacgaagctgttctggccatgtccagtcggtcgtggttgagt
tacacgtaccagaaccggttccacctgacccccctgtcgtacgagactctggagtacgcc
tcgggcttcgcctcagaacagtgtccagagggtatcgtagccatctctgctaacacactc
agaattttggccctagagaaactgggagctgtgtttaaccagatctccacccccctgatg
tacaccccccgtaagttcgtgatcgacacccagagtaacaacatcatcatgatcgagaca
gaccacaacagctataccgaggccaccaaggcacagcgtaaacaacagatggctgaggaa
atggtggaagcagcaggggaggaggagaaggaactggcggcggagatggcagcagccttt
attaacgagaacctgccggaggccacgtttggttcccccaaggcagggcctgggatgtgg
gcatccgtcatcagggttctcaaccctatacagggaaacacattggacctcattcaactg
gaacagaatgaagctgcattcagtattgccatctgcaagtttgctaacagaggcgaggac
acgtttgttgttgtcggcacagcgaaggacatgaccatgaacccccgcacctgctccggt
gggttcctccacacataccagctcgtcaacaacggggaaaaactggaacttatacacaag
acaccagtagaggatgtcccaggagccatcagttccttccagggccggatactggtgggg
atcgggcgactgctgcggatctacgacctcggcaagaagaagctgctcaggaagtgtgag
aacaagcacgtgccaaacttcatcatgtccatccacaccatggggcaccgcatctttgtg
agcgatgttcaggagtccttccacttcatccggtacaagcgacaggagaaccagctcatc
atcttctctgatgacaccaactaccgctggatcacctgctctacacagctggactatgac
actgtggccgcaggtgacaagtttgggaacctgtccatggtgaggctgccagcaggggtc
acggacgaggtcgacgaggatcccaccggcaacaaggcactctgggatagaggacttctc
aatggggcatcacagaaggctgacgtgatctgtaactaccatgtgggagaggtggtgacg
tcagtacagaaggctaccctgatcccaggcggctccgagtccctggtgtacaccaccatc
tcgggtggggtgggcatcctggtgccattcaccagtcacgaggaccacgacttcttccaa
cacttggagatgcacatccgctcggagcaccctcccctgtgtgggcgtgaccacctgtcc
ttcaggtcgtactactatcctgtcaagaatgtgatagacggggacctgtgtgaacagttc
aactccatggaacccagcaagcagaaaagtgtggcagaggagctggacagaacacctgca
gaggtgtccaagaagctggaagacatcagaacaagatatgccttctaa
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integrated database retrieval system
