Branchiostoma floridae (Florida lancelet): 118417146
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Entry
118417146 CDS
T01074
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bfo04131
]
118417146
Membrane trafficking [BR:
bfo04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
118417146
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
LRR_1
Ig_3
Ig_2
LRR_9
ig
DHU1_N
LRR_LRWD1
V-set
LRRNT
Motif
Other DBs
NCBI-GeneID:
118417146
NCBI-ProteinID:
XP_035678448
UniProt:
A0A9J7L935
LinkDB
All DBs
Position
6:complement(12643037..12674980)
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AA seq
1022 aa
AA seq
DB search
MLMKMATLYSTTLVSAVLVSLLMTAGASCPEGCRCISGGVYCTEGNMRPLPKSFPISTES
LYLFRYNLSSILKDQFTNLPLLESLNLRGNHISNLAPQAYAGLPILQELILSDNELVVIP
RKSLVGLRNLERLLLSNNSIIALNGQAFRDLSSLRVLKLDRNEIVFIFGSAMKGLDSLEI
LDLSSNQLEIVPAECLQSLGQLRELNLQNNKILALNDDGFSGLGKLDRLYLDSNRIGYVS
SKAFRNLDSLRELTLKNNLITVVPGQAIGLAKTIEILRLAGNPLNMSDLSSLRAAPTILE
LDLANIGRLSKRALLPLENLTNLNISNCSLARVPILRHLGTMHVLDLSWNNITTLPPEAF
STMTDLTHLRLSNINLSSIEPNAFAGLSSLQHLSLENNQLKTLPRNLFMPLRSLELLDLY
NNPWSCDCRLHWLIRWAQFKNFFFSTVLYMKCSTPANFKRTELSLAEVPIKNLSCIPPRI
VSSSKDLYLSEGDPAFFNCDVSGFPIPDVEWLGPGGKPIKQTGDGRRFPSKEGTLEIFNV
SRKDAGQYVCWAGNGGGNATRSFNLTVTVSTNPHSSTISNTASTSSGTMRGTTSTAEGAT
QGFGILGNRVSMAILIGTNAAAFLAGMLLVTLIVLIYLFWCKKKTKKKPVETAVDKPNRS
SRPNDYQPDASTQTTRVQEVRPLGQQPEQRPLPEQPSEPKCPERVYEAIPEMDLDSDGSQ
YHTPLKHPSEYQPSEYQPEVVAIKPYSSKDHRPEQSLSLGATESETSSNRRSNTFPDFQD
IHSPQAAATPTPSEGPAKSVSFSTKPESGGMFSDAKPLPDVTADTPTPARGGHPYLKKST
SRPLCVEQSKAPHVGSSSVPNIHSGKQLVAFLDGSTLGTLSSTKDSSHRNNQNNKSAPGI
YQPLINQNSDAGPNTNGMVRQASQDRTSGSLTSNPYRPAEQASTRDQLNQTYHPPEPVPN
TENDNSEDYSMDNLKEPKYYELEGPDSPYDFEEGGTDGNEKGKEVYLESNPPALEQVGST
VV
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgttgatgaaaatggccaccttatacagcacgaccctggtctctgcagtcctggtaagc
ctactgatgactgcaggtgcatcctgccctgaggggtgccgctgcatctcgggaggcgtg
tactgcaccgaggggaacatgcggccactgcccaagagcttccccatcagcacggagtcc
ttgtatctgttcagatacaacctctcctccatcctgaaggaccagttcaccaacctgcca
ctactagagagtctaaacctccgagggaaccacatctccaacctcgcgccacaggcgtac
gccggcttgcccatcctgcaggagctgatcctgtcggacaatgaactcgtcgtcatccct
cgaaaatcacttgtaggactacggaacttggagaggctgttgcttagcaacaactcgatc
attgccctgaatggtcaggccttccgcgatctctccagtctgagagtcttaaaacttgac
aggaacgagatagtcttcatctttggcagcgccatgaagggtctggacagtttggaaata
ctcgacctctccagcaaccagcttgaaattgtaccagcagaatgtctccagagcctgggg
cagctacgtgaactcaacctacagaataacaagattctggcactgaacgatgatggtttt
agcggtctgggcaaactagaccgcttgtacctcgacagtaaccgaatcggatatgtctcc
tccaaggcgttccgtaacctggactctctccgcgaattgacgctaaaaaataacctcatc
acggtggttccaggacaggctatcggactagcgaagacgatagagattttacgcctcgct
ggaaaccccctcaacatgtcagacctgagctccctgagggccgcaccgaccatccttgag
ctggacctggcgaacattgggcgcctatccaaacgtgcactgctgcctctggaaaaccta
accaaccttaacatcagtaactgctcgctggcgcgtgtgcccatcctgcgccacctgggg
accatgcacgtgttggacctgtcctggaacaacatcaccaccctgccgcctgaagccttc
agcaccatgaccgacctgacacacctgcgtctcagcaacatcaacctcagctctatagaa
cccaacgccttcgcagggttatcatcactacagcacctgtccctagagaacaaccagctg
aagacattacccaggaacctcttcatgcccctacggagcctggagctgctggacctgtac
aacaatccttggtcatgtgactgccgactacactggctaatccggtgggctcagttcaag
aacttcttcttctccactgtcctgtacatgaagtgctccaccccagcaaatttcaagcgg
acagagctgtcccttgctgaagttcctatcaagaatttgtcctgcatccccccaagaata
gtgagctcttccaaagacctctacctaagtgagggagatccagccttcttcaactgtgac
gtgtctgggttccccatcccagatgtggaatggttgggtccaggaggaaagccaatcaaa
cagaccggggacggaagacgcttcccctcaaaagaaggaactctggagatattcaatgtg
tcaaggaaagatgctggccaatacgtttgctgggcaggaaatggcggtgggaatgccacc
agatcattcaacctcaccgtcactgtgtccacaaaccctcactcttctaccattagcaac
acagcatcaacgtcttctggcacaatgagggggacaacctcgaccgcagagggcgccaca
cagggcttcgggatcctgggaaaccgtgtctccatggccattctgatcggcacaaacgcc
gcagccttcctcgcaggaatgcttcttgtcaccctgattgtactgatctacctgttctgg
tgtaagaagaaaaccaagaagaagccagtagagactgctgtggataagccgaacaggagc
agccgtcccaatgactaccagccggacgccagcacccagaccacgcgggtccaggaggtg
cggccgctcgggcagcagccagagcagcgccctctaccggagcagccctccgagccaaag
tgtcccgagcgtgtgtacgaagccatcccagagatggacctggactctgacggctcgcag
taccacaccccactgaagcacccatcagagtatcagccatcagagtatcagccagaggtg
gtcgccatcaagccctacagtagcaaagaccacaggcctgagcagtcactgagcctcggt
gcgactgaatctgagacttccagcaacaggagatccaacacttttcctgacttccaagac
atccactcaccccaagcagcagccacgccaactccatcagagggcccagctaagtctgtc
tccttcagcaccaagcctgagagcggaggtatgttctccgatgctaagcctctgccagac
gtgacggcagacactcccacgccagcacggggtggtcatccttacctcaagaagtccacc
agtcgtccgttatgtgtggagcagtccaaggcaccacacgtcgggtccagctccgttcca
aacatccacagtgggaagcagctggtggcattcctggacgggtccaccctgggcactctg
tccagcaccaaggacagcagccatcgcaacaaccaaaacaacaagtcagctccaggtata
taccagccactcatcaaccagaactctgatgcagggcctaatacaaacggcatggtccga
caggcaagccaagatcgcacatctggttcactgacctccaacccttacaggccggctgag
caggcgtcgactcgcgaccagttaaaccagacataccaccctcctgaaccagtgccaaac
acggaaaacgacaacagcgaagactacagtatggacaacctaaaagagccaaaatactac
gagttggaagggcctgactccccgtatgactttgaggaagggggcactgatgggaatgaa
aaggggaaggaagtgtacttagagtccaacccaccagccttggaacaggtgggatcaaca
gtagtgtag
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integrated database retrieval system
