Branchiostoma floridae (Florida lancelet): 118417209
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Entry
118417209 CDS
T01074
Name
(RefSeq) iroquois-class homeodomain protein IRX-4-like isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bfo03000
]
118417209
Transcription factors [BR:
bfo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
118417209
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
BUD22
MRP-S32
Nop14
Motif
Other DBs
NCBI-GeneID:
118417209
NCBI-ProteinID:
XP_035678559
UniProt:
A0A9J7MTV6
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Position
6:complement(10786553..10792931)
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AA seq
486 aa
AA seq
DB search
MSYAQFGYPYPSSSQLLMSSHAASCCEAGRPIMSDPHTGQAVCSCQYEGRVAGLVPPRVG
EMSLSSVYGSPYAGQGYIASFGADPSAFYSPLANPYDPSAGLQQPTAYYPYDPATLAAGA
QYPYGSYGAMDGTRRKNATRDATSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVST
WFANARRRLKKENKMTWSPRNRCGDERREDGSDNEDDDDDEDRKDREGNSDDDNHGGLEG
DRDNQELDVGNPCEENRQEDNASGSVSDYRPPPQSSSPADSLGSISAAPRPASPEPSAAA
NSVPVPPIPSENKPKIWSLADTATCSSPAPRPDIIKTTLQGPVHMQFSHHRPFDSAVTNL
RQWVDGVFHRPIGSLPAGPMGPLPVASQASASATVSGMHPSSNPHTTPPGFVSSQERTPA
LPIALRTHASPAKDEPCRTAIDLGCEADQPIRTAFKPVQKRSSDGVPGQSRPREFVAAMA
LTSLSR
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacgcacagttcggttacccctacccgtcctcctcacagttgctcatgtccagc
cacgccgcgtcgtgctgcgaggccgggcggcccatcatgtcggacccgcacaccggccag
gccgtgtgctcctgtcagtacgagggcagggtggccgggctggtgccgccacgggtcggt
gagatgtccctcagcagcgtgtacggctcgccgtacgccggccagggctacatcgcctcc
ttcggtgccgacccgtcggccttctactctcctttggcgaacccgtacgacccgtcggca
ggtctacagcagcccaccgcctactacccgtacgaccccgccacgctagccgccggcgca
cagtacccatacggcagctatggcgcgatggacggaacaagacggaaaaacgccacccga
gacgccaccagcactctcaaagcctggctgaatgagcacaggaagaacccgtaccccacc
aagggtgagaagatcatgctcgccatcatcaccaaaatgactctaactcaggtgtccaca
tggttcgcgaacgccaggaggagactcaagaaggaaaacaaaatgacctggtctccaaga
aacaggtgcggagacgagaggagggaagacggcagcgacaacgaagatgatgacgatgat
gaagacagaaaagatcgagaaggaaacagtgacgacgacaatcacggaggactggaggga
gacagagacaatcaggagttggatgtgggaaatccttgtgaggaaaaccgacaggaagac
aatgccagcggttcggtatcggactatcggccgccgcctcagtcctccagccccgctgat
tccctgggatctattagtgctgcaccgagaccggccagtcccgagcccagtgccgccgcg
aactctgtaccggtcccaccgattccttccgaaaacaagccaaagatctggtccttagcc
gacacggcgacctgtagtagccctgccccacggccggacataatcaagacgacactacaa
ggccccgtacacatgcaattctcacaccatagacccttcgattccgcggtaaccaacctg
cggcagtgggtggacggagttttccaccggccgatcggatcattgcctgcgggcccgatg
ggacccctccccgtggcaagtcaagcgtctgcctcggcaacggtatcgggaatgcaccca
agctccaatccgcacaccactcccccagggttcgtgtcgtcccaggagaggacccctgcc
ctccccatcgctctcaggactcatgcttcaccagccaaagacgaaccttgtagaacggct
atagacttgggctgtgaggccgaccaacccattcgtacagctttcaaaccggtacaaaag
aggtcaagtgacggcgtcccggggcagtctcggccgagagagttcgtggcagccatggcg
ctaacaagcctctccagatag
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