Branchiostoma floridae (Florida lancelet): 118417323
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Entry
118417323 CDS
T01074
Name
(RefSeq) AP-1 complex subunit gamma-1-like
KO
K12391
AP-1 complex subunit gamma-1
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
118417323
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bfo04131
]
118417323
Membrane trafficking [BR:
bfo04131
]
Endosome - Golgi transport
Others
AP-1 complex
118417323
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Alpha_adaptinC2
Cnd1
DUF5609
RIX1
Motif
Other DBs
NCBI-GeneID:
118417323
NCBI-ProteinID:
XP_035678744
UniProt:
A0A9J7L9J4
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All DBs
Position
6:complement(10569308..10586821)
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AA seq
839 aa
AA seq
DB search
MSQLLEKLTMPAPAKLRDLIRQIRSVRTQAEERAVIEKECASIRGMFRDEDNTYRCRNVA
KLLYIHMLGYPAHFGQLECLKLIASPRFTDKRIGYLGAALLLDERQDVHLLVTNSLKNDL
NHNTQFVVGLALGTLGNICSVEMSRDLAGEVEKLLKSSNAYIKKKAALCAVRIIRKVPEL
MEMFLPATKNLLNEKNHGVLLTAVCLITEMCDKSPDALAHFRKQNKMVPQLVRILKNLIM
AGYSPEHDVSGVSDPFLQVRILRLLRLLGKNDSDASEAMNDILAQVATNTETTKNVGNSI
LYETVLTIMDIKSESGLRVLAVNILGRFLLNNDKNIRYVALNSLLKTVQTDLNAVQRHRS
TIVDCLKDPDISIRKRAMELSFALVNSNNVRGMMKELIFFLEKADPIFKVDCTSNICIAA
DKYAPNKRWHIDTMLKVLSTAGSYVRDDVIAHMISLVSEASSLQAYTVQHLFRAIQEDIT
QQPLVQVASWCVGEYGDLLMSGQVEEEEPLQVTEDEVLDTLEKIMNSSGSSAVTKSFTLT
AVMKLSTRFTQTIPRIQALMDQFGSSVDMELQQRSVEFAKLFKSYDHMRSGLLERMPPLD
AKVGSKGEGEANTNGETTAVSPPASPAVKQEEGNALLDLLGGGPSPAPVIPQVEKPAAPP
AASNDLLGDLLGLDLSSPAAGPAPMVPGMSAPQPQVDMLGGLMDGVTPQPAVQMSANNLG
IPSLIAYEKNGLKIEFSFQKDNSNANVVIITLTATNSTDTPMDEFVFQAAVPKTFQLQLQ
SPSGSVVPASNMGVVTQVIKILNPQKAPIRMRIKLTYNYKGNNVNDMGEVNSFPAALWQ
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagctactggaaaagttgacaatgccggcgccggctaagctgcgcgacctgatc
cggcagatccgatcggtccgcacccaggccgaggagagggctgtgattgagaaggagtgt
gcgagtatccgtggcatgttccgagacgaggacaacacctatcgctgccgtaatgtggcc
aagctactgtacatccacatgctgggctatcctgcacattttggacagctggaatgcttg
aagttgatcgcgtcccccagattcacagacaagcggattggttaccttggtgcagctctc
ctgctggatgagagacaggatgttcacctgttggtcaccaacagtctcaagaatgacttg
aaccacaacacccagtttgtggtggggctggcgctcggcaccctgggaaatatctgctct
gtcgagatgagcagggacttggcaggagaagtggagaaactcctcaagtcgtccaatgct
tacatcaagaagaaggctgctctatgtgcagttcgcatcataaggaaggttccagaattg
atggagatgttcttaccagccacaaagaacctgctgaatgagaaaaatcatggtgtcctg
ctgacagcggtgtgtctgatcacagagatgtgtgacaagagcccagatgctctggctcac
tttaggaagcagaataagatggtcccacaactggtgcgaatcctgaagaaccttatcatg
gcagggtactctccagaacatgatgtgtccggagtcagcgatccattcttacaagtgagg
atattgcggttgctgaggcttctgggaaaaaatgacagtgatgcaagtgaagccatgaat
gatattttggcacaggttgccaccaacacagagacaacaaagaatgttgggaattcaatc
ctgtatgaaacagtactcactatcatggacatcaaatcagagagtgggcttagggttcta
gctgtaaatattttgggaagattcctgttgaacaatgacaagaacataagatatgtagcc
ttgaactccttgttgaagacagtgcagacagatttgaatgctgtccagaggcacagaagc
acaatagtggattgtctgaaggaccctgacatctccattagaaaacgagcaatggagttg
agctttgcactggtgaacagcaacaatgtacgagggatgatgaaagagcttatcttcttc
ttggagaaggctgaccccatctttaaagtagactgtacttccaacatctgcatagctgcc
gacaaatatgctcccaacaaaaggtggcacatagacactatgttgaaagttttgtcaacg
gctggtagctatgtgagagatgatgtgattgcacacatgatctccctagtgtcggaggcc
tcttcactacaggcctacacagtacagcacctcttcagggctatccaggaggacatcaca
cagcaacccctggtccaggtggcctcctggtgtgttggagagtatggagatctcctcatg
tcagggcaggtggaggaggaagagcctcttcaggtgacagaagatgaggttttagacaca
ctggagaaaatcatgaacagttctggttcgtcagctgtcacaaaatccttcacactgact
gcagtgatgaagctcagcacacgctttacacagacaataccccgaatccaagccttaatg
gatcagtttggcagcagcgtggacatggagttacagcaacgatctgtagaatttgccaaa
ctcttcaagtcttatgatcatatgaggtctggtctacttgagagaatgccaccactagat
gccaaggtaggaagtaaaggagagggagaagcaaacacaaatggagagaccacggcagtt
tcacctcctgctagccctgctgtcaaacaggaagagggtaatgcattgctggacttgtta
ggaggagggccaagtcctgccccagtcatcccacaagtggagaagcctgcagcaccacct
gcagccagtaacgacctgctgggagatctgctgggcttggacctgtcctcacctgctgca
ggtccagctcccatggtgcctggcatgagcgctccccagccccaggtggacatgttagga
ggcctgatggacggggtcactccacaaccagccgtgcaaatgtctgccaacaatctaggg
atcccgtcactaatagcatatgaaaagaatgggctcaagatcgagttcagcttccagaag
gacaacagcaatgctaacgtagttatcatcacgctgacggccaccaacagcacggataca
cccatggatgagtttgtgttccaggctgcagttccaaagacattccagcttcagctccag
tccccatctggtagtgtggtccccgcatccaacatgggagtggtcacacaggtcatcaag
atcctcaacccacagaaagcaccaatcaggatgagaataaagttgacgtacaactacaag
ggaaacaatgtcaacgacatgggagaagtgaacagctttccagcggctctgtggcaatga
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