Branchiostoma floridae (Florida lancelet): 118417442
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Entry
118417442 CDS
T01074
Name
(RefSeq) NFX1-type zinc finger-containing protein 1-like
KO
K27391
NFX1-type zinc finger-containing protein 1
Organism
bfo
Branchiostoma floridae (Florida lancelet)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
AAA_30
ResIII
DEAD
SLFN-g3_helicase
UvrD-helicase
PhoH
nSTAND3
CheB_methylest
AAA_16
Motif
Other DBs
NCBI-GeneID:
118417442
NCBI-ProteinID:
XP_035678898
UniProt:
A0A9J7L9Y1
LinkDB
All DBs
Position
6:2089561..2096506
Genome browser
AA seq
1737 aa
AA seq
DB search
MKLMVMIRNSEFLRGTLTTYFAAMPTEMSDQDQPFSGEPIKHALRLFRELLDRSPSSYIQ
VVAPLAVLGTTINTLRTVSTVVDEVIETRLMEVESRKDAIIDIQRRGAVLRDSDGTLATR
LDRQLQLETPPDDFRELTIIPTFEDIHTDKEPFLRTNIVRGRYPDVDTYLDVQFRLMRED
FVRPLREGIAEFLDMRKQGLGKDRRLQDIRVYHDVHVVHPLCTMNGIVYRIQFDAARLRG
VRWQSTKRLIFGSLLCLSKDEFKTMFFATVAERDAEELQQGCVQIRFEQNHDDASSISPT
DTFIMVETSAYFEAYRHVLKGLQEVEEDAMPFAKYIVDCDCANGVDPPAYLRERYGDVEY
DLRALVETPKQVLVTARRRARPRNRDPFGSDLDESENSGDDDEKLTDVYGSNNPHFARAR
SVPILRDDMWPSADALHLDESQYLAVKMALTKEFSVIQGPPGTGKTYIGLKIVQALLKNK
SVWLRDQDLMNSPTRPILVVCYTNHALDQFLEGISEFHSTDIVRVGGRSRSEKMEQFNLK
TIRFSQRKSRDLPRYIHEGAAEARDDMECFRQGMEIAVAKMMATQRGLLHEHALMPLMSD
KHRESLMNMPPMGHDPGWAMVGKKGSITVQWLGLKGNVIILPGGGNQNQPEEEEEDGRVE
EDEKDEEIDVVEEAGFAEEQRLLDTDDDKRRKAKRKVREDVHVDLALDVDALQLEEDQAG
EHGLWQVQTNAKKMKQKVKHELSKTDMMTETEVRRVHNVWTLQLRDRWRLYRYWVARYWA
KYRESIEGYEREYEHAAKRLVEFQTQEDGEIMKQATVIGMTTTGAARYRSILQDIQPAII
IVEEAAEVLEAHIVTTLSQQCQHLILIGDHQQLRPNPTVYQLAKKYNMDISLFERMVKND
MQCVRLQSQHRMRPEFARLLTPHIYESLDNHESVLNYENIKGVSSNMFFVDHSYWEAHDG
DTKSRSNMHEAKFMASFCRYLLKQGYSPSQITILTTYTGQLFNFKKVMPRQVFEGVRVCN
VDNFQGEESDIILLSLVRSNVEGNVGFLKVENRVCVALSRAKKGFYAIGNLTMLSQTSTL
WSKIIQELREQGCVGRHLKLCCQNHPDTSIMAVTEKDFEKAPAGGCMRPCDFRLECGHAC
ASACHPIDPEHEEYKCKKPCKNVLCDLGHKCPKPCHETCDDCKIRVEKTIPDCQHKQKVA
CYVPPSEFVCQIPCEKTLPCNHKCKNKCGERCTQYCKEVVPHQLPCLHTIQAACSAKEDS
LVCNTPCPQVLKCGHPCSGTCHLCKQGRLHQPCVRPCNRELICSHQCREPCSHQNCPPCR
SPCRNRCVHSHCQDECGKPCVVMPCQEPCEWRCKHHKCDKHCGEPCDRPRCDQPCQKRRR
CGRCKKSRPCIGMCGEPCPKKCRVCDRKELTEDVFGTEGEPGARFVQLEDCGHVLEVSGL
DQWMDQGTDDTTDRNIKLKTCPIARCKTPIRHNVRYGNSIKNTLAKIEEVKNQQYVPKAE
RNSSLKMLAGLRDHDLDLRLYCAESSTDLYKQVGRCCLSSPEELAMFEKRILFLKKIARR
KKDKKKCLSALADKRYIMELDREIKELENWLLRRTAYVSDQEWEEFEREMARLKCLLKLR
VLQSQIQRKGISLKDVTQTILDGAERRLTDLKPFTEDREEMVEQTLEYVQETVTLKSATA
MGAAYGAMGVRQSRASTRHPLGTAGDAYGRIEARRLARSGQADLAKVYGSKFDDFTI
NT seq
5214 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgatggtgatgatccgtaactccgagttcctacgcgggaccctcacgacgtac
ttcgccgccatgccgacagagatgtccgaccaagatcagcctttttctggagaaccgatc
aaacatgccctccggttgttccgtgagctcctggacaggtctcccagctcttacatacag
gtagtcgcacctctggcggtgttaggaactaccattaacactctaagaacagtaagtacg
gttgtggatgaagtcatagagaccaggttgatggaagttgagtcgcgcaaagacgccatt
atcgacatccagcgcagaggagcagtgttacgagacagcgacggaactctagccacacgc
ctggaccgacagcttcagctcgagacgcctccggacgacttcagggaactaacgataatc
ccaacattcgaagacatccacacagacaaggagccgtttctccgcaccaacatcgtccgc
ggccgctacccagacgtggacacgtacctggacgtccagttcaggctgatgcgggaagac
ttcgtacggccactacgagaagggatcgccgagttcctggacatgcgcaaacaaggattg
gggaaagacagaaggctccaagacatccgtgtgtaccatgacgtccacgtggtccacccc
ctctgtacgatgaatggcatcgtctacaggatacagttcgacgctgccagactccgggga
gttcgctggcagtccacaaagcgactcatattcggctcccttctctgtctctccaaggac
gaattcaagaccatgttcttcgcgacggtcgcagaacgcgacgctgaagagctccaacaa
ggatgcgtgcagattcggttcgagcaaaaccacgacgacgcgtcgtccatcagtcccacc
gacaccttcatcatggtagagacttccgcctacttcgaagcctaccgacacgtcctgaaa
ggtcttcaagaggtcgaagaggacgcaatgccatttgccaagtacatcgtggactgcgac
tgtgctaacggcgtggatccaccggcctatcttcgagaaaggtacggggatgtcgaatat
gacctcagagctctagttgagactcccaagcaagtactagtgaccgcgagacgacgtgcg
aggccaagaaacagggacccgtttggctcagatcttgacgaatcagagaactccggcgac
gacgacgagaaacttaccgatgtatacggcagcaacaacccccactttgctcgagctcgg
tcggttcccattctccgagacgacatgtggccttctgctgatgctctgcacctggacgag
tctcagtacctcgccgtgaagatggcgctgaccaaagaattctctgtcatccagggtcca
ccgggaacagggaagacgtacatcgggctcaagatcgtccaggctctgctgaagaacaag
agcgtgtggctgagggaccaggatctgatgaacagcccaactaggcccatcctcgtggtg
tgttacacgaatcatgctctagatcagttcctggaaggcatctctgagttccactcgaca
gacatcgtgagggtgggagggcgaagccgcagtgagaagatggagcagttcaacctgaag
accatcaggttcagccaaaggaagtcaagagacctccctcgatatatccacgaaggagct
gcggaggcaagggatgacatggaatgtttccgacaaggcatggagatagctgtagcaaag
atgatggcgacgcaaagaggactccttcatgagcatgctctgatgccattaatgagcgac
aaacacagagaatctttgatgaatatgccccccatgggacacgaccctggatgggccatg
gtaggaaaaaagggttccataaccgtgcagtggcttggtctgaaaggaaatgttatcata
ctgccgggagggggcaaccagaaccaacctgaggaagaagaggaggatggaagagtggaa
gaggatgagaaagacgaagagattgacgtcgtagaagaagccggctttgcagaggaacag
cgcctactcgacaccgacgatgacaagagaaggaaagccaagaggaaagtccgtgaagac
gtacatgtggacctcgcacttgacgtggacgcgctacagcttgaagaggatcaggctggg
gaacatggtctgtggcaggtgcagaccaatgcgaagaagatgaaacagaaggtgaagcac
gaactcagcaagacggacatgatgaccgaaactgaagttcgccgtgtccacaatgtctgg
actctgcagctgcgggaccgatggcgcctctatcggtactgggtggcaaggtactgggcc
aagtacagggagtctatcgaaggctatgaacgagaatacgaacatgcggctaagcgtcta
gtagagttccagacccaagaagacggcgagattatgaagcaagcaaccgtcatcggcatg
accaccactggtgctgccaggtaccgttcaatcctgcaggatattcaacctgctatcatc
attgtagaagaggcagcagaggttctggaggctcacatcgtcacaacgctctctcagcag
tgccaacatctcatcctcatcggagatcaccaacagctccgtcccaacccaaccgtctac
caactggccaagaaatataacatggacatctccctgtttgagcgcatggtaaagaacgac
atgcagtgtgtgcggcttcagtcacagcatcgcatgcggccagagttcgcccggctcctg
acgccacacatctacgagtcactggacaaccacgaatcggtgctcaactacgagaacatc
aagggtgtctcttccaacatgttcttcgtggatcacagctactgggaagcgcacgacggc
gacacgaagagccgctccaacatgcacgaggcaaagttcatggccagcttctgccgctac
ctgcttaagcaagggtacagcccgtcccagatcaccatcctcaccacgtacacgggacaa
ctcttcaacttcaagaaggtcatgccgaggcaggtctttgagggtgtgcgcgtctgcaac
gtggacaacttccaaggagaagagagtgacatcatcctgctgtcactggtgaggagcaat
gtcgaaggcaacgtgggcttcctcaaggttgaaaaccgtgtttgtgtggctctttctcga
gcgaagaaaggtttctacgccattggaaacctgacaatgctgtcgcagactagtacactg
tggagcaagatcatccaagagcttcgggaacaaggttgtgtaggccggcacctcaagctg
tgttgccaaaaccatccagacaccagtatcatggcggtcactgagaaagacttcgaaaag
gcaccggcgggaggctgcatgcggccctgtgacttcaggctagagtgtggccatgcctgc
gcaagcgcctgtcacccgatcgaccctgagcatgaagagtacaagtgcaagaagccttgt
aagaatgtcttgtgtgacctcggtcataagtgtccaaaaccctgtcatgagacctgtgac
gactgtaagatacgtgtagaaaagaccatccccgactgtcagcacaaacaaaaggtggcg
tgctatgtacctccgagtgaattcgtatgccaaataccatgtgagaagacccttccctgt
aaccacaaatgcaagaacaagtgcggtgagaggtgcacccagtactgcaaggaagttgta
ccacaccagctcccctgtttacacaccatccaggcagcctgctcagctaaggaagatagc
ctcgtctgcaacaccccgtgtccacaggtgctgaagtgcggccacccttgttctggtaca
tgtcatctttgcaagcagggaaggttgcaccagccatgtgtgcggccatgcaaccgtgag
ctcatttgctcccaccagtgcagagaaccgtgttctcatcagaattgtcctccgtgtcga
agtccttgcagaaatcgctgcgttcacagccattgccaagatgagtgcgggaagccctgc
gtagtcatgccgtgccaggagccctgcgagtggagatgcaaacatcacaagtgtgacaag
cactgcggtgagccttgcgatcgtcctcgatgtgaccagccctgccagaaacgcagacgc
tgtggcaggtgtaagaagagccgaccgtgcatcggtatgtgtggggaaccttgcccgaag
aagtgccgagtttgcgatcgtaaagagttgacagaggacgtcttcggcaccgagggcgaa
cccggcgcacgattcgtacagctggaggactgcgggcacgtgctagaggttagcgggctg
gaccagtggatggaccaggggacggacgacaccaccgacagaaacatcaaactcaaaacc
tgcccgatcgcgagatgcaagacgccaatacgacacaacgtgcgctacggcaatagcatt
aagaatacgctggcaaagatcgaggaggtaaagaaccagcagtacgttccaaaggcagag
aggaattccagtctcaagatgttagctggtctccgtgatcatgatttggacctgcgactg
tactgtgctgagtcctcgactgatctctataagcaagtgggacgctgctgtctgtcttca
cctgaggagttggccatgtttgaaaaaagaatccttttcctgaagaaaattgcgaggcgt
aagaaagataaaaagaaatgcctttctgccctggcagacaagcgctacattatggaatta
gacagggaaatcaaagaattggagaactggctgcttcgtcggacggcctatgtgagcgac
caggaatgggaggagtttgagagagagatggcccgactgaagtgtctcctgaagctccga
gtccttcagagtcaaatccagaggaagggaatcagcctgaaagacgtgacccagacgatc
ctggacggtgcggaacgcaggctgaccgacctcaaacctttcacggaagacagggaggaa
atggtcgagcaaaccctggagtatgtccaggaaactgtgaccctgaagagtgccacagca
atgggggctgcatatggtgctatgggggtgaggcagtcacgggcttcgaccagacatccg
cttggcaccgccggagatgcatatggacggatcgaggcgcggcgcctggcccgatcaggt
caggccgacttggcgaaagtctatggctcgaaattcgacgacttcacaatctaa
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integrated database retrieval system
