Branchiostoma floridae (Florida lancelet): 118417487
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Entry
118417487 CDS
T01074
Name
(RefSeq) transcriptional repressor CTCF-like isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bfo03000
]
118417487
03036 Chromosome and associated proteins [BR:
bfo03036
]
118417487
Transcription factors [BR:
bfo03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
118417487
Chromosome and associated proteins [BR:
bfo03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
118417487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2HE
Zf-C2H2_ZNF451
Zf-C2H2_ZNF451_C
zf-C2H2_7th_ZNF462
zf-C2H2_jaz
zf-C2H2_6
zf-met
Thioredoxin_7
zf-C2H2_15
Zn_ribbon_Dof
zf-C2H2_7
TFIIIA_zf-C2H2
GAGA
Motif
Other DBs
NCBI-GeneID:
118417487
NCBI-ProteinID:
XP_035678956
UniProt:
A0A9J7LAE2
LinkDB
All DBs
Position
6:complement(17892275..17898076)
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AA seq
492 aa
AA seq
DB search
MRVGGKTYQCYKCDYTCQRMAFLERHMKVHTDERPFKCGTCEREFRTMQSLQNHINSHNG
VKPHKCDQCPMSFVTSGELMRHRRYKHTHEKPHKCTMCDYASVEISKLKRHMRSHTGERP
FQCGMCSYASPDSYKLKRHMRTHTGEKPYECSVCLATFTQSGSLKMHMQRHLGTAPSYVC
DICGTALTRKSDLKSHVRKLHTGDKLLTCKYCDSAFPDKYNLTKHLKTHQGEKRFRCEDC
NYCCTQERHLINHKRCHTGEKPFVCVQCDHTFRQEQLLKQHIKVHHTPGYTPPRYACTNC
DKSFTRKGNLRKHVEQAHDPSAVLPAMMGRGSRGSRLHDRLDDDDDSMSEGEHEFEQAMD
EIEAQQMDGEGMEEREMEPQDEDSDVDYRPGDDIDETPKRKPKTPRKRKANTPKSTPQKR
KRQKKKIKSEEEEAEEEPEGEEMGEAPPPVTEEGEQPAEQEAEAEAEAAVEDQQPAEAEV
EAEAETEATEQT
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgttggcgggaagacgtaccagtgctacaagtgcgactacacgtgtcagaggatg
gccttcctggagcgccacatgaaggtgcacacggacgagcgccccttcaagtgcggcacg
tgcgagcgggagttccgcaccatgcagtccctccagaaccacatcaacagccacaacgga
gtcaagccccacaagtgcgaccagtgtcccatgagctttgtgacgagcggggagctgatg
cgccaccgacggtacaagcacacgcacgagaagccgcacaagtgcaccatgtgcgactac
gccagcgtggagatcagcaagctcaagcgccacatgaggtctcacaccggagagcgcccc
ttccaatgtggcatgtgtagctatgccagtcctgacagctacaagctgaagcgccacatg
cgcacccatacaggcgagaagccatacgagtgctccgtgtgtctcgccacctttacccag
agtggcagcctcaaaatgcacatgcagcgtcatttgggaacggcgccctcttacgtctgc
gacatctgtggcacggcgctgacgcggaagagcgacctgaagtctcatgtccgcaaactc
cacaccggcgacaagctgctcacctgcaagtactgtgactcagccttccccgacaagtac
aaccttaccaaacatctcaaaacacaccagggagagaagcgcttcaggtgtgaggactgt
aactactgctgtacccaggagaggcacctcatcaaccacaagcgctgccacaccggcgag
aaacccttcgtctgtgtgcagtgtgaccacaccttccgccaggagcagctgctcaagcag
cacataaaggtgcaccacacgcctggctacacccctccccgctacgcctgcaccaactgc
gacaagtccttcacccgcaaggggaacctgcgcaagcacgtggagcaggcgcacgacccc
agcgccgtgctgcccgccatgatgggccgcggcagcaggggttcccggctacacgaccgg
ctggacgatgatgatgactccatgtcggagggggaacacgagttcgagcaggccatggac
gagatcgaggctcagcagatggacggagagggcatggaggagcgggaaatggagccgcag
gacgaagactcagatgtcgactacaggccaggagacgacatcgacgagacacccaagcgc
aagcccaagaccccccgtaagaggaaagccaacacgcccaagtccacgccccagaagagg
aaacgacagaagaagaagattaagtctgaggaggaggaggctgaggaggaaccggagggg
gaggagatgggagaggctcctcctcctgtcactgaggaaggagaacagccagcagagcag
gaagctgaagctgaagctgaagcagctgtggaggatcagcaaccagctgaggctgaagtt
gaagctgaggctgaaactgaagctacagagcagacctag
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