Branchiostoma floridae (Florida lancelet): 118417503
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Entry
118417503 CDS
T01074
Name
(RefSeq) nuclear pore complex protein Nup93-like isoform X1
KO
K14309
nuclear pore complex protein Nup93
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118417503
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfo03019
]
118417503
Messenger RNA biogenesis [BR:
bfo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118417503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Nup84_Nup100
DUF1978
Motif
Other DBs
NCBI-GeneID:
118417503
NCBI-ProteinID:
XP_035678976
UniProt:
A0A9J7MU92
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Position
6:6158913..6192761
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AA seq
830 aa
AA seq
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MATDMDTEGFGDLLQRAEQLTADMDSGVELPRVERNLQQILDAGERLWSRSAQAAAQDQT
DARASILLGAKGFDVPRISQRLETLSAAKTFEPLEPVRDTDIQGFLRNERENALLAAIEE
SRRNTFESVERHHWEFMQQEWEIEKQKILNALISAGEEAFDFTQETEVPGQLGDTTVGTG
RSNMDSMEMSYARQVFVYNDAVVQGAVKPSLADLFTQVADKVDDKNILDLWEMVQAVTDV
PLVQAQSPMEARRSSQLQRAFIGKARHFLEQRYVQFITTTIYDNLQQAQLGGIPGTYNMV
RSFLNIRLPAVMAGLEDGEVDGHPVWAMVYYCLRCGDLDAAAEVTENCQSLQGDFAMFLR
EYVRSEDRRLSPSTETKVRLHYRRAIRNSTDPFKRAVYCILACCDTTDTHSDVADKTEDY
LWLKLCQVSLDEDSTGQQDKFTLPQLQSLLLEEYGETHFSASQQPFLYFQVLFLTGQFEA
AIDFLFRVDQLRAHAVHVAVVLYEMKLLLTPNTVQAQLLTKEDGDPVPMRRLNFGRLMMS
YTRKFESTDPREALQYFYILRELKTPGGENLFMACVSALVLETREFDMLLGKLERDGTRK
PGAIDKFHGDTHKIIEMVAQDTESKGQSEDAVRLYELAKDHEKVLILLNKLLCQVVSQPP
APQSDRDRLKALAVGIAERYQTQGHSGAQLEASTFFLLLDMVTFFDHYHTGQLDQALDII
QRLQLVPLTQEAVEQRVAAFSSYADEVRRNLPDVLLAAMNILYSKYKAVRSAGQASPTSR
GRLREDSKTESYLTYLRKQARALITFAGMIPYRMPGDTNARLVQLEVLMN
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggctacagacatggatacggagggttttggagacctgctccagcgagcggaacagctg
acagctgacatggacagcggggtggagctgccccgggtggagaggaacctgcagcagatc
ctggatgctggggagaggctgtggtccagatcagcacaggctgcagcacaggaccagaca
gatgcaagggcgtccattcttctgggtgccaagggttttgacgtcccacgaatctcacaa
agactggagaccctgagtgcagccaaaacatttgagcccctggaaccagtcagggataca
gacatacaggggttcttacggaatgagagggaaaatgccctgctggcagctattgaagag
tcaagaagaaatacgtttgagtctgttgagcgccaccattgggagttcatgcagcaggag
tgggagatagagaaacagaagatcctcaacgctctcatcagcgctggggaggaggccttc
gacttcacacaggagacagaggttcctggtcaactgggtgataccactgttggtacgggg
aggagcaacatggatagcatggagatgtcctatgctagacaggtttttgtgtacaatgat
gcagtggtccaaggagcagtcaaaccaagtctggctgacctgttcacacaagttgcagac
aaggtggatgataagaacatactggacctgtgggagatggtgcaggcggttacagatgtc
cccctggtccaggcacagtcccccatggaggccaggaggtcctcacagctacagagggcc
ttcatagggaaggccaggcacttcctggagcagaggtatgtgcagttcatcaccaccacc
atctatgataacctacagcaggcccagctgggaggcatcccgggaacctacaacatggtc
aggtccttcctaaacatcaggctgccggcagtcatggctgggctggaggatggagaggtt
gacggccaccccgtgtgggccatggtgtactattgtctgcgctgtggggacctggacgct
gctgcagaagtcacagagaactgccaaagtctgcagggagacttcgccatgtttttgaga
gagtatgtccgaagtgaagacagaagattgtctcctagcacagagaccaaagtccgcctg
cactacagaagggccatcagaaacagcacagatcccttcaaaagggcagtgtactgtatc
cttgcctgctgtgacacaacagacacacactctgacgtcgctgacaagacggaggactat
ctctggctaaagctgtgtcaggtgtccttagatgaagatagcacaggtcaacaggacaag
ttcacactcccacagctgcagagcctcctgttggaggagtatggtgagacccacttcagt
gcgtcccagcagccgttcctgtacttccaggtcctgttcctgaccggacagttcgaggcg
gccatcgacttcctgttccgcgtggaccagctccgagcgcacgccgtccacgtggccgtc
gttctgtacgagatgaaactcctgctcacccccaacacagtccaggcacaactcttgacg
aaggaggacggtgacccggtgccgatgcggcggctgaacttcggtcggttgatgatgagt
tacaccaggaagtttgagtccactgaccccagggaggctctgcagtacttctacatactc
agggagctgaagacccctggaggagagaacctgttcatggcctgtgtcagtgctctggtg
ctggagactagagagtttgacatgctgctcggaaagttggagagagatggaacaaggaag
ccgggagccattgataagttccatggtgacacccacaagatcatagagatggtggctcag
gacacggagagtaagggtcagtctgaggatgctgtcaggctgtacgaactcgctaaggac
cacgagaaggttctgatcctgctgaacaagttgctgtgccaggtagtgtcacaacccccc
gcaccccagtcagacagggacagactcaaggctctggctgtcggcatcgcagagaggtac
cagacccagggccacagtggtgcccagctggaggccagtacgttcttcctgctgctggac
atggtcactttctttgaccactaccacaccgggcagctggaccaggcactggacattatc
cagcgtctccagttggtccccctcacccaggaggcggtggaacagagggtcgctgccttc
tcttcttacgcagatgaggtgagaaggaaccttcctgatgtgttgttggcagccatgaac
atcctgtactcaaaatacaaggctgtcaggagtgcgggtcaggccagtccaacatccaga
ggccgtctaagagaggacagcaagacagagtcttacctgacctacctgaggaaacaggcc
cgcgccctcatcacctttgcaggcatgattccctacaggatgccgggggacaccaacgca
cgcctcgtgcagttagaggtgctcatgaactga
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