Branchiostoma floridae (Florida lancelet): 118417635
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Entry
118417635 CDS
T01074
Name
(RefSeq) low-density lipoprotein receptor-related protein 3-like
KO
K20050
low-density lipoprotein receptor-related protein 3/10/12
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bfo04131
]
118417635
Membrane trafficking [BR:
bfo04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
118417635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
Ldl_recept_a
CDCP1_CUB_6
CUB_2
Motif
Other DBs
NCBI-GeneID:
118417635
NCBI-ProteinID:
XP_035679142
UniProt:
A0A9J7MSB5
LinkDB
All DBs
Position
6:12552824..12564137
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AA seq
849 aa
AA seq
DB search
MEKSEGGGRLGGTGRRLPGWKTWIVLFFTTVLQVSHVCGEDRGILASSGRAGGEVCTDEK
RHGPRGRILSPNYPLSYPTNTECNWYINANPDDVITISFEDFDLEAAENCGYDSLEIGPV
VSAGEQYVKYCGTYAPVPPPFLSTRDHAYVKFYSDPSTVGRGFALTYITGPQNAASCQQD
EFHCDNGKCVLSSWTCNGMDECGDNSDERGCTDIHPPTPPPHVSPCGADQYMCVAMNTGR
DACFWDFTRCDGKQDCEDGQDEANCGGIVHCGGILSNTSGAFSSPNYPRDYQNNLSCDWI
ITIPNMVGVIIQLQFEDFALENRPATDSVTVYDGDNEDEDELGVYYGSNPSIGEIESSGP
HMLVRFRSDSSGTNRGFLASYRIKGPCVGLRHPCADHSTCYSSEDRCDGIWTCPDGTDEK
GCDACGSGEVPCGGPSKRCYPEEHHCNGEPFCDGGRDETHCDSCSPAEGTFHCRNRRCIY
EKWVCDSQDDCGDGSDEEGCKVYVSEKVITAAVIGSIVCGLLLVIALGCTCKLYALRLQD
DPRYQSTRFDTPMMRLQHELNRREAPPSYHVAVASHGPRQFQEAHTAFTQHVQAAMNMRP
GRRLQQMRQFLRRSRSSESTSTAQAVITGESQERIALTVTRSSESMQSTVSDRVEVTRQA
DGSLRIRASISSAGNSSDSEDTDNETNRIIGESDPPMGAAAAVPEFQAPPISKTGFLPPS
PPVFPPVRSIAALPSTSRQEEDQQSRGSRSSSDSELLDLGADVANSSATVVIHSSSQPFS
LRSAGDGRSFQVHEAPNLNSNGGDRSDDGDTRSSRSQSMESVSSEESVGFHADSGQLPLL
QQTGEESSC
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagtctgagggaggggggcgcttaggcggaaccgggcggagacttccgggttgg
aagacatggattgttcttttcttcacaacagtcttgcaggtgtcgcatgtctgtggcgag
gaccggggcatcctggcatcctccggaagggctggcggggaagtctgtacagacgagaaa
cgacacgggccccgcggtcgcatcctcagcccaaactatcccctcagctatcctaccaac
actgagtgcaactggtacatcaacgcaaaccctgatgatgtcattaccatcagctttgaa
gactttgaccttgaagcagctgagaattgcggctatgacagcctggagatcggcccggtg
gtgtccgcaggggagcagtacgtgaagtactgcggcacctacgctcccgtcccgccaccg
ttcctatctacacgagaccacgcctacgtcaagttctacagtgatccaagcactgtgggg
agggggtttgcactaacatatataacaggtccccagaatgctgcaagttgccagcaggat
gagttccactgtgacaatgggaagtgtgtgctgagctcatggacctgtaatggcatggac
gagtgtggggacaactctgatgaaaggggctgcacagacatccaccctcccacccctccc
ccccacgtgtccccatgtggtgctgaccagtacatgtgtgtggccatgaacacgggcagg
gacgcctgcttctgggacttcacacgctgcgacgggaaacaggactgtgaggacgggcag
gatgaggccaactgtgggggcattgtccattgtggaggaatcctgagcaatacatcaggg
gctttctcctctcccaactatccccgtgactaccagaacaacctgagctgtgattggatc
atcaccattccaaatatggttggtgtcatcatccagcttcagtttgaagactttgctctt
gagaaccgcccggccactgattctgtcactgtgtatgatggggataatgaagatgaggat
gagctaggtgtgtactatggcagtaacccttccattggagagattgagtcatcagggccc
catatgttggtcagatttcgctccgacagctctggaactaacaggggctttctggcaagt
taccgcatcaaaggtccttgtgtaggattgcgacatccatgtgcggaccacagcacctgt
tacagctccgaagacaggtgcgatggcatctggacatgcccggatggcacagatgagaaa
ggctgtgatgcctgtgggagtggagaggtcccgtgtgggggtccctccaagcgctgctac
cctgaagaacaccactgtaacggtgaacccttctgtgatggaggcagggacgaaacccac
tgtgactcctgcagccctgcagaaggaacattccattgtcggaacaggaggtgcatctat
gagaagtgggtgtgcgactctcaggacgactgtggggacggatcggacgaggaaggctgc
aaagtgtacgtgtcagagaaagtgatcacagctgctgtgattggttccatcgtgtgtggc
ctgctgctggtcatcgccctcggctgtacctgcaagctgtacgctctccggctgcaggac
gatccacgctaccagtccacccggtttgacacaccgatgatgcgactgcagcacgagctg
aatcgccgggaggcaccgccctcctatcacgtcgccgtggcatcacatggaccccggcag
tttcaagaggcccacacggcattcacccagcacgtgcaggcggccatgaacatgaggcca
gggcggcggctgcaacagatgaggcagtttctacgccgtagccgtagcagcgagtcaaca
agcaccgcccaggccgtcatcacaggagagagtcaggagcggatagcgctcacagtcact
cgatccagcgagagcatgcagagtacggtgagcgaccgggtggaggtcacccgacaggcg
gatgggtcgctcagaatccgggcatccatcagctcagcagggaactcgtctgattccgaa
gacaccgacaatgaaacaaacagaatcatcggggaaagcgatccccccatgggtgcagcc
gctgctgtcccagagttccaagcgccgcccatcagtaagactggtttcctgcccccctcc
ccacccgtgtttccgccagtgagaagcattgctgctctgccatccacatctcgacaggag
gaagaccagcagagtcgtggtagcagaagctccagtgactcagaactgttggatctaggg
gccgatgtggccaacagcagtgctactgttgtcatccactccagcagccaacctttctcc
ctaagatccgcaggagatggaagaagctttcaagttcatgaagcgccaaatctcaacagc
aatggaggagatagaagtgatgacggtgacaccagaagctctcgttctcaatccatggag
tccgtcagttcggaggagtcggtaggatttcacgctgacagtgggcagctgccacttcta
cagcagacaggagaggagagctcctgttag
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