Branchiostoma floridae (Florida lancelet): 118417690
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Entry
118417690 CDS
T01074
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118417690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfo03021
]
118417690
03036 Chromosome and associated proteins [BR:
bfo03036
]
118417690
Transcription machinery [BR:
bfo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
118417690
Coactivators
SAGA/TFTC/STAGA complex
118417690
Chromosome and associated proteins [BR:
bfo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
118417690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Formin_GBD_N
Motif
Other DBs
NCBI-GeneID:
118417690
NCBI-ProteinID:
XP_035679244
UniProt:
A0A9J7LC14
LinkDB
All DBs
Position
6:complement(12377644..12387894)
Genome browser
AA seq
1080 aa
AA seq
DB search
MATPAKSLDDLLNSEVDESAVSALVGSLESQLLSQSTAASTGQVSGSSADANHVNSVSVS
DGTSQGQKLGLANMNPNVHGLVKSELQVESQNSMLSIKPPVHALNASSVVSSTLVSSVVA
SSVSSGNVSMVSASNSLNSTGSNVNVIGNNIPNATISSSSAQQGQAPSNAGAPLLVNTAS
TASTVNSASVSNVGGSITAGNVGVVQNNPIVSINGGSSNFPPNTVATTARRTPPNSSVPN
QPPPFSVSVVQQPNGMPSTAHTTGASQNKPLTITVTVPKPTTPTPNINSKMTVREQLAAQ
HKLLGAPGAVQPGVANAGASDQVQVNPSGVNGPHVVKQESGSQQPSLAPNMVTIGQGGIQ
HGTLQQPGTQPGTVQPGTIQQQAIQPQVTIQQRTAQQPLINVVTATTIRNANPGSVTVVP
SAPGNAPQTRLVATVQQPSTHQQQPNRPTITSTPMRITPQQPAIAPRPPGPMTATVTLPP
GFTIPQGMVLVKQENGNLALMPASALPASLQPRPNASNVPGTATFKLSTTQGVQPGVSTQ
VITRPAGQTQPAQIKPAPQPPQMVQTAIQPQPVAMAQPRMVQPNPATGHIATTILPGTTR
RSLGTAAVPVQQPAQSSLTLTPEAIENVKKCKNFLTTLVKLASSGNQPPEVVKNVKELVQ
NLLDAKIEPEEFTLKLQTELKSSPQPYLVPFLKKSLPYVRQALAKGGAIGGMQIPPQTSS
IAQAPVATTTSFVTSTSSRQSVVVTTQSQHPPNVRQQAAIKIAQMTALQQAQLKAMGHST
TQAANHQQRPVLVTTQQKGGVMRFLPGTPQSTHKVKESPSRPQARHPGGHAAFSRDDDDI
NDVASMAGVNLSEESARILATNSELVATELRSCKDETFLTSAPLRKRILEIARKHGLEDA
SPDVVSLVSHAAEERLRNLLEKLTVIVRHRMEAYKDDSRYEVTGQVRQQVKFLEELDRLE
KKRHDEQEREMLLRAAKSRSRQEDPEQLKLKQKAKELQQQELEKIRNQEANMTALMAIGP
RKKRKVDSPGPGSSSSFTPGASVQPVRPRTKRANLRDLIFLLEQEKETCKSNMLYKAYLK
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcctgccaagtcgctggacgatcttctcaactcagaggtcgatgagagcgca
gtaagtgccttagtcgggtctcttgagtcccagttactctcccaaagtactgccgcatcc
acggggcaagtttcagggtcctcggcggacgctaatcatgtcaattctgtgtcggtgtct
gacggcacttcgcaaggacaaaaactaggcttagctaacatgaaccctaacgttcacggc
ttggtaaaatcggaactacaggtggaaagtcagaactccatgttgagtataaaacctcca
gtccacgccttgaacgcaagttctgtggtgtcttcaaccttggtgagttccgtagtagct
agtagtgtttccagtggaaacgttagtatggtttcagcatcgaacagtttgaactcgacc
ggatctaacgttaacgttataggaaacaacattccaaacgccaccatttcatcaagttct
gctcaacaaggccaagcgccttctaatgcaggagcgccactgcttgtaaacactgcaagc
actgcttccaccgtaaactctgccagtgtttcaaatgtgggaggatccatcactgccggt
aatgtaggggtggtccagaataatcccatcgtgtcaataaatggagggtcgtcaaacttc
ccgcctaacacagtggcaaccacagccaggagaactcctccaaacagttctgtaccaaac
cagcctccacctttttcagtaagcgttgttcagcagccaaacggaatgccgtcgaccgca
cacacgacaggtgcatcccaaaacaaacccctcaccatcactgtaacagtgcccaaacca
acaacacccacaccaaacatcaactcgaaaatgactgtccgagagcagcttgctgcccag
cataagctgcttggtgcgccaggtgcagtacagccaggtgttgcaaatgctggtgcatct
gatcaggtgcaggtgaatccgtcaggtgtcaacggcccgcacgtagtgaaacaagaatca
ggtagccaacaaccgagcctggcaccaaatatggttactattggacaaggtgggatacag
catgggacgttgcagcagcccggtacgcagccaggcacagtacaacctggaacgatacaa
cagcaggctatacagccccaggtgactatacagcagagaacagcacagcaaccattgata
aatgttgtaacggccacaactatcaggaatgctaaccccggttcagtcactgtggtcccc
tcagctccgggaaatgcaccgcagaccaggctcgtcgcgaccgtgcagcaaccgtccacg
caccagcaacaacccaacagaccaaccatcacgtcaacgccaatgagaataacgcctcag
cagccggcaatcgcaccacggccgcccggaccaatgacggccactgtcacacttccgccc
ggtttcacgataccccaggggatggttctcgtgaagcaggagaacggtaatctggcgttg
atgccggcgagcgcgctacctgccagcttacagcctcgtcccaatgccagcaacgtacca
ggcactgcaacattcaagctttccacaacacaaggtgtacagcccggcgtcagcacacaa
gtcatcaccagaccagcgggccagacccagccggcgcagatcaaaccggccccgcagccg
ccgcagatggttcagaccgccatccagccgcagccggtggccatggcgcagcccaggatg
gtacagcccaacccagcgacaggacacatagccaccacgatcttgccaggtactactcgt
cgttccttaggtacagctgcggtacctgtacagcaacctgcgcagtccagtctgaccctc
acaccggaggctatagagaacgtgaagaagtgtaagaacttcctgaccaccctggtgaag
ctggccagcagtgggaaccaaccgcctgaagtggtcaagaacgtcaaggaactggtgcag
aatctactggatgctaagatagagcccgaggagttcaccctcaaactgcagaccgagctg
aagtcctccccacagccatacttagttccctttctgaagaaaagtctaccgtacgtccga
caagcactggcaaaagggggtgcgataggcggtatgcagattcctcctcagacctcgtcc
attgcacaagctccggttgccacaacgacatcgttcgtgacgtccacgtccagccgccag
tcggtggtggtgaccacacagagccaacacccgcccaacgtcagacaacaggcagccatc
aagattgctcagatgacggccctccaacaggcccagctcaaagccatgggtcattccacc
acccaggccgctaaccaccagcagcggccagtcctggtcaccacccaacagaagggtggg
gtcatgaggtttttaccagggacaccccagtcaactcacaaggtgaaagaatctccatca
agaccacaggccagacatccaggaggacacgctgccttctccagggacgatgatgacatc
aatgacgtggcctccatggctggggtcaacctctcggaagagagcgcccgtatcctagca
accaactcagagctggtggccacggagctgaggtcgtgtaaagacgagaccttcctgacg
tccgctccactgaggaaaagaatactagaaattgcaagaaaacacggtttagaagatgcg
agtcctgatgtagtgagtctggtgtcacatgcagcagaggagagattacgcaacttgtta
gagaaactcaccgtcatagtcagacataggatggaggcttacaaggatgactctaggtac
gaggtgacaggccaggtgagacaacaggtgaagtttcttgaggagttggacagactggag
aagaaacggcacgacgagcaggagagagagatgcttctcagagcagctaagagtcgatcc
agacaagaagaccctgagcagctcaaattaaaacaaaaggccaaagagctgcaacagcag
gaactggagaagatcaggaaccaggaggccaacatgactgcactcatggccatcggcccc
cgtaagaaaagaaaagtggactctcccggacctggcagctcctcctccttcacacctgga
gcttctgtgcagcctgtgcggccgcggaccaagcgagccaacctcagggacctgatcttc
ctgctggaacaggagaaggagacgtgtaaatccaacatgctctacaaagcctatctcaaa
taa
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