Branchiostoma floridae (Florida lancelet): 118417780
Help
Entry
118417780 CDS
T01074
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bfo04040
]
118417780
Ion channels [BR:
bfo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118417780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ank_KRIT1
Motif
Other DBs
NCBI-GeneID:
118417780
NCBI-ProteinID:
XP_035679389
UniProt:
A0A9J7LAT3
LinkDB
All DBs
Position
6:complement(23871490..23894735)
Genome browser
AA seq
893 aa
AA seq
DB search
MSAGSAEEGSAPKTSGTDNSGFAPPSDDTELHTAVNSGDVDHVRTLLNEPGVDVNARGDG
NSTPLHLAVINNDISVVKLLLERDADIYAEDADHVSPWRLAQAAQCSLQILQVILKAAAD
LQGDVVDSNQGATSPSKAVPAADCGWALMEVAKSGGSQAAEKLRSLLSISGDVSMTQWDS
RGRTILHHAVANQEALQFLLESGRTTDLLEAADEDGCTALHLAAEGGYTESVSSLLMAGA
NREAADKDGQTALHKTAGRGHYNVVETILSSGNMADGDAGLVDEIRDTDDVTRRLVNSLD
RQGRKPLHMAAEKGQEKIVRLLLEKNTSINKTRDGRSPLHLAAESGSAETVETLIFAHRH
SLAWTDKQGDTPLHAAARRNHAHLIPLLLKEKEGLASKENRQGLNALDVAIDERAKDAAA
AMGKHELWDTFLTYPQTKRGKDQKPQMYRMIKDMPEAAMAFIDRMVVEHKEDSEDNSDGG
RVWKYDFMYLYTRDPRDSPLEAMIWYKRWQCLEHHVVVKFLKCNWQRFGVYTFMAYLLVY
VIFMAILTATVAIDASDTTYFETHPSLTVSFDGTCHIVCFNTIAVFLMSMGYMVKEVYQI
YQKRLHYLGWRNLLQWVLYLSAFLYSLPVSTPLDSWKTEAATVATMFGWLNFAMYLQRVP
VFETDVYIYILLIGRIFKSLRRVILVFLLYTLAFTTCFYYIASKADLPDSTDFSGFHSFS
SSFFTTLGMVMGELNIQFFLDRQKHSGVTLVLLVFFIFLMNIVIINLLIALTLDAVDIRD
VRAKAAFNRRIHQAEHMLDKASGFWSAFADRARVLTWMDTNQPSCMDKTRQFLDITEDEG
EMGRTEKSPSEEQEDLRRRLEDMEATLKAVSVQLRSMGEMMVQQSKELPVQKA
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctggatcggccgaggagggctctgcgccaaagacgtccggtaccgacaacagt
ggcttcgcgccccctagcgacgacacagaactgcacactgctgtcaactctggggacgta
gatcatgtcaggacgctgttgaatgagccgggagtggatgtgaacgcacgtggagatggg
aactccacacccttacacctggcagttatcaacaacgacatctccgtagtcaaacttctg
ttggagagggatgcggacatctacgcggaagatgcagatcacgtgtccccctggcggctg
gcacaggcagcgcagtgctctctgcaaatcctacaagtgatcctgaaggccgcagccgac
cttcagggtgacgttgtcgattccaaccagggggcgacatcgcccagtaaggcagtccca
gcggcagactgcggctgggcgctgatggaggtggctaagagcggcggcagccaggcggcg
gagaagctcagaagtctcctgtcaatcagcggtgacgtcagcatgactcagtgggattcc
cggggtaggacgatactgcaccacgcggtggccaatcaggaggcgctacagtttctactg
gagagcgggcgaacaacagacctacttgaggcagcagacgaagatggctgcaccgctctc
catcttgccgctgaaggaggctataccgaaagtgtttcgagcctcctgatggccggagcc
aatcgcgaggctgctgacaaggatggacaaacagcgctgcacaagacagctgggagggga
cattacaacgttgtggaaaccattctatcgtctggaaacatggcggacggtgacgccgga
ttggtggacgagatccgggacaccgatgacgtcacaaggcgtctcgtcaactccctggat
aggcagggtaggaaacccctccacatggcagcggagaagggccaggagaaaattgtccgg
ctcttgctggagaagaacacctctatcaataagaccagagacggccgaagcccgctgcac
ctggcggcagaaagtggcagtgcagagaccgtcgaaactctgattttcgctcacaggcac
tccctggcctggacagacaagcaaggcgacacgcccctacatgcggctgccaggaggaac
cacgcccatctcatccccctcctccttaaagaaaaggaaggtctggccagtaaggagaac
aggcaggggctgaacgccttggacgtcgccatcgacgaacgggcaaaggacgcggcggcg
gcgatggggaagcacgaactgtgggacacgttcctgacttacccgcaaacgaaacgagga
aaagaccagaagcctcagatgtaccggatgatcaaagacatgcctgaagcagcgatggcc
ttcattgatcgtatggtggtcgaacataaggaggattctgaagacaatagtgacggagga
agggtttggaagtatgactttatgtacctgtatacacgagacccgcgggattctccatta
gaggcaatgatctggtacaaacgatggcagtgtctggagcaccatgtggtggtgaagttt
ctcaagtgtaactggcaaaggttcggagtctacaccttcatggcctatctactagtgtat
gtaatcttcatggcgattctcaccgctactgtggccattgatgcctcggacacgacgtac
ttcgagactcatccttcgctgacggtctctttcgacggaacgtgtcatatcgtttgtttc
aacacgattgctgttttcctgatgagtatgggctacatggtcaaggaagtctaccagatc
taccaaaagagacttcactacctcggctggaggaacctgctccagtgggtgctgtatttg
agcgccttcctgtacagcctccccgtctccactccgctggacagctggaagactgaggcg
gcaacagtcgccaccatgttcggctggctcaactttgccatgtatctgcaaagggtgccg
gtgtttgagactgatgtctacatctacatcttgctgattgggaggatctttaagtccctg
aggagggtgattctggtgttccttctctacacactggccttcaccacgtgtttctactac
atcgcatcgaaggctgacttgccagactcaacagacttttctggattccactccttctcg
tcttcgttcttcaccaccctggggatggtgatgggggaactcaacatccagttcttcctg
gacaggcagaagcactctggtgtcaccctggtcctcctggtcttcttcatcttcctcatg
aacatcgtcatcatcaatctcttgatcgccttgaccttggacgctgtagacatccgtgac
gtcagagctaaagctgcgttcaaccggagaatccaccaggcagaacacatgttggacaag
gcgtccggtttctggtcagcctttgctgaccgcgcccgagtgctgacctggatggacact
aaccaaccctcctgtatggacaagacaagacagtttttggacataaccgaggatgaaggg
gagatgggaagaactgagaaaagcccttcggaagagcaagaggacttacgccggaggttg
gaggacatggaggccactctgaaagccgtctcggtacagctgaggtctatgggggagatg
atggtccagcagagtaaagaactaccggttcaaaaggcctag
DBGET
integrated database retrieval system
