Branchiostoma floridae (Florida lancelet): 118417841
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Entry
118417841 CDS
T01074
Name
(RefSeq) DDB1- and CUL4-associated factor 11-like
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bfo04121
]
118417841
Ubiquitin system [BR:
bfo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
118417841
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
WD40_Prp19
WDR55
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WD40_CDC20-Fz
EIF3I
WD40_Gbeta
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_HPS5
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_SPT8
Tricorn_2nd
Beta-prop_SCAP
Beta-prop_RIG_1st
Cytochrom_D1
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
118417841
NCBI-ProteinID:
XP_035679480
UniProt:
A0A9J7LBB9
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Position
6:10073926..10081867
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AA seq
467 aa
AA seq
DB search
MDTLVGGVNPLKCGASSLDGSTAYLLKQREFGMCTNSGPFSTGQRNSIGAGFIPNRMETV
AAYGEKVFCGTFSKDGSVFLSSSQDDHIRLYNTSHGSFTEKRCITARDVGWSVLDTAFSP
DGTCVIYSSWSDFIHLVDISSKGEESHMALDLSPLERDFAIFSVVFSHDGKEILGGASDC
YMYIFNRERNQRTLMMDAHEDDINSVKFADESSHILYSAGDDGVCKVWDRRILDEEDPQP
VGIFAGHSDGITYIDSKGDGRYLITNSKDQTIKLWDVRKFSSSEGLESTRRAITNYRWDY
RWMSVPKIVRNCRRKLKGDTSVMTYRGHNITKTLIRCRFSPVHTTGQRYIYTGCGTGAVI
IYDILSGNMVAKLIGHKACVRDVSWHPTDVRIVSSSWDGHVSQWDYQGSDHPQDSDSDSE
YETGHSGGRLVIINVNGVRRKSKRLKQQDQARHKRHRPEEAPSRSSL
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggacacacttgtgggcggtgtcaacccactgaaatgtggtgcctcatctcttgatggg
agcactgcatatcttctgaaacagagggaatttgggatgtgcacaaattctggtccattc
tcaactgggcagagaaactccataggagctggcttcattcccaaccgaatggaaacagtg
gcagcatatggtgagaaggttttctgtggaacattctccaaggatggatcagtgttcctc
agttcatctcaggatgaccatatccgtctgtacaacacgtcacacggcagctttacagag
aagagatgtatcacagcacgggacgtgggatggagtgtactggacactgccttcagccct
gatggcacctgtgttatatactccagttggtcagacttcattcatcttgttgatatatct
tcaaagggtgaggaatcacacatggccttggacctcagcccccttgaacgagactttgcc
atcttctctgtggtcttctctcatgatggcaaggaaatccttggaggtgccagtgactgc
tatatgtacatcttcaaccgagagagaaaccaaagaacactaatgatggatgcccatgaa
gatgacataaacagtgtgaagtttgcagacgagtcctcccacatcctgtactcggcaggg
gatgatggtgtgtgtaaggtctgggacaggaggattctggatgaggaggacccccagcct
gttggcatcttcgctggccacagcgatggtatcacttatattgactccaagggagatggc
cgctacctcatcacaaactctaaggaccaaaccatcaagctctgggacgtcagaaagttc
tcatcctcagaggggttggagtccacaagacgagccattacaaactacagatgggactac
aggtggatgtcagtaccaaagatagttcggaactgtaggaggaagctaaaaggggacaca
tctgtgatgacttatcgaggccataacatcaccaaaactctcatcaggtgcaggttttca
cctgtacacacaactggtcagagatatatctacaccggatgtggcactggtgctgtcatc
atctatgacattctctcaggaaatatggttgccaagctgattggtcacaaagcctgtgtt
agggatgtgtcctggcacccgactgatgtgcggatcgtcagcagctcttgggatggacat
gtcagccagtgggattaccaaggctcagatcaccctcaggattccgactcggactcagaa
tacgagacggggcacagtggtggacgacttgtcatcatcaacgttaacggtgtccgcagg
aagagtaaacggttaaaacaacaggaccaggcaaggcacaagagacatcggcccgaggag
gccccatctaggtcgtccttgtga
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