Branchiostoma floridae (Florida lancelet): 118418002
Help
Entry
118418002 CDS
T01074
Name
(RefSeq) interferon regulatory factor 8-like
KO
K10155
interferon regulatory factor 8
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bfo03000
]
118418002
Transcription factors [BR:
bfo03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
118418002
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
MH2
APC_N_CC
Motif
Other DBs
NCBI-GeneID:
118418002
NCBI-ProteinID:
XP_035679686
UniProt:
C3ZAX5
LinkDB
All DBs
Position
6:3775052..3786639
Genome browser
AA seq
467 aa
AA seq
DB search
MSHNNNHDLNKNDRKRLRKFLLEHLEWNDVTGLSWMDRSQGIFRIGWRHAGRDGYDPEVD
GMIFRLWAELTGKHKPGQREDPTAWKTRLRNALRRLPDFAEQSQHSRPDDPHDPFRVYKF
VPTPNLPPQQHLQAGATIPGLGEDFGMKCDDIDDVLNEIDPNTWQAVSPLQLDMLQDQGG
MQVQQQPLVGAAPPQVFPASGQPAQQGQLGVEDFPGLTGHTDVDITVQYRGRCVVPPQRV
SNPRGLRIFSGSPFTQQIGRQVIVQAQLAEGMYGPKDVAQFVLPDVDRASMGQKQFDLTR
QLLEHTERGVVLEFHQNDIYARRLCRSKVFWEDSNRPTGTPLKLNRDQPTKIFDYQTAFI
PALQHYVTHEGAARPSPDLRLCVGQVWDRDRRPFKDNLITVTITHLTAARQLEVVRQVRG
QHSLSLSGAGVSCSNEYDKLVKQVECLVQSMNIDASQDAAPPFANMM
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacaacaataaccatgacctcaacaagaacgaccggaaacggctccggaagttc
ctactcgagcacctagaatggaatgacgtcacaggactgtcgtggatggacagatcacag
ggcatcttccggattggctggcgccatgcaggacgggacggttatgacccggaagtggat
ggaatgatcttccggctctgggcggagctgacaggaaaacacaaacctggccaaagggag
gacccgactgcctggaaaacgaggctacgaaacgcactgcgaagattaccggactttgcc
gagcagtcccagcacagcaggcccgacgatcctcacgaccccttccgtgtctacaagttc
gtcccaacacccaacctacctcctcagcaacatttgcaggcgggcgctaccattccgggt
ctgggggaggacttcggcatgaagtgtgacgacatcgatgatgtgttgaacgagattgac
ccgaacacgtggcaggcagtgtctcctctgcagttagacatgttacaggaccagggtggg
atgcaggtccagcaacaaccgctggtcggcgctgctccaccacaagtctttcccgcctct
ggccaaccggcacaacaaggacagctcggcgtcgaggactttcccggactgactggccac
acggatgtagacatcacggtacagtacagggggcgctgcgtcgtgccaccgcagcgcgtc
tccaaccccagaggtctccgcatcttctccgggtctcccttcacgcagcagatcgggcgg
caggttattgtgcaggcacagctggcagagggaatgtacggtcccaaggacgtggcccag
ttcgtcctgccggacgttgaccgcgcgagcatgggtcagaagcagtttgacctgacccgg
cagcttctggagcacacggagcgcggcgtggtgctggagttccatcagaacgacatctac
gccaggagactctgcaggagcaaggtgttctgggaggatagcaaccggccaaccggcaca
ccccttaagctgaaccgtgaccagcccacgaagatcttcgactaccagacggccttcatc
ccggccttacagcactacgtcacacacgagggtgccgcgcggccgagcccggatctgagg
ctatgcgtggggcaggtgtgggaccgggacaggcgccccttcaaggataacctcatcacc
gtgacgatcacgcacctgacggcggcgcgccagctcgaggtggtccgccaggtgagagga
cagcactcgctgagtctgagcggcgccggcgtctcctgttccaacgagtacgacaagctg
gtgaagcaggtggagtgcctggtgcagagcatgaacatagatgcttcacaagatgctgcg
ccaccgttcgccaacatgatgtaa
DBGET
integrated database retrieval system
