Branchiostoma floridae (Florida lancelet): 118418066
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Entry
118418066 CDS
T01074
Name
(RefSeq) periodic tryptophan protein 1 homolog
KO
K14791
periodic tryptophan protein 1
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bfo03009
]
118418066
Ribosome biogenesis [BR:
bfo03009
]
Eukaryotic type
90S particles
Other 90S particles
118418066
Pre-60S particles
Other pre-60S particles
118418066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WDR55
WD40_WDHD1_1st
EIF3I
Beta-prop_TEP1_C
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_RFWD3
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
WD_LRWD1
MIOS_WD40
Beta-prop_SCAP
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_DCAF12
Pep3_Vps18
Beta-prop_SPT8
ROS_MUCR
Motif
Other DBs
NCBI-GeneID:
118418066
NCBI-ProteinID:
XP_035679787
UniProt:
A0A9J7MSY4
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Position
6:5854827..5865149
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AA seq
478 aa
AA seq
DB search
MTSSVVTCLAWVPRGVAKAVPDKVQVDKEELQRLIKETSNSLKELEDEEKEEQDVEDVEM
EGGATGGEDAEDDLAEFNLDNYDDDPAGSLIGNLASLTVYASNDDDPYITVKEDAELEEE
EREDFTIKSSDNLVIVGRAEEDCSILEVYIYNEDEKVQYVHHDLILPAFPLALEWMNFDP
GEDKPGNLVAVGSVTPGIDIWDLDVVDSLEPVVTLGSHKKKPSKKKKKVSAPPRVGHTDA
VLDLSWNRLVRNILASASADRTVALWDLSQGKPVTTLSQHKDKVQTLEWHPFEAQSLLSG
GFDKHAILYDCRSPKDSHKSWVLSGEVERVMWNHFSPFHFLASTDDGFVYNVDIRTDKPV
FTLSAHPQAVTGLSLSSAVPGCLVTTSSDKTLKVWDIQDNKPALMFQKEMKMGGLTCARS
CPDSPFLFAMGGEKDSLRVWSVMDSGNTAVQTRFEGRPRPQLPTQTPSEMTSADQPEM
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcagtgtggtgacttgtctggcctgggtgccgagaggtgtggctaaggctgtg
ccggacaaggtccaggtagataaggaggagttacagcgtctgataaaggagacatccaac
agcctgaaggagctggaggatgaggagaaggaggagcaggatgtggaggatgttgagatg
gagggcggggccacgggaggggaggatgcagaggatgacctggcagagtttaacttagac
aactatgatgatgatcctgcgggaagtctgattggtaacctggccagtctgacggtgtac
gccagcaatgatgacgacccttacatcactgtaaaggaagatgcggagctagaagaagag
gagagagaagatttcaccatcaagtcttcagacaacctggtgatagtggggagggcagag
gaagactgcagcattctggaggtctacatttacaatgaggatgagaaggtccagtatgtc
caccatgacctcatccttcctgccttcccattggctctggagtggatgaactttgaccct
ggggaggacaaaccaggtaatctagtagcggtgggtagtgtgactccaggtatcgacatc
tgggacctggatgtggtggacagtctggaaccagtcgtcacgttaggctctcacaagaaa
aagcccagcaaaaagaagaaaaaggtttcagccccacccagagttggtcacacagatgca
gtcctggacctgtcctggaacagactagttaggaatattttagccagtgcatctgcagat
cgcacagttgcattgtgggatctgtcccagggaaaacctgttacaacgttatcccagcat
aaagacaaggtacagacattggaatggcacccgtttgaggcacagtcacttctttctggg
ggatttgacaaacacgccatcctgtatgactgtcggagtccaaaggacagtcacaagtcc
tgggttctgagtggggaggtggagagggtcatgtggaaccacttctctcccttccacttc
ctggcgagcacagacgatggttttgtttataacgttgacatcaggacagacaagcctgtt
tttacattaagtgcccatccacaagcggtaacaggcctgtccctcagcagtgctgtacca
ggctgtctggtgacaacatcaagtgacaagacactgaaagtctgggacatccaggacaac
aagcctgctctcatgtttcagaaggagatgaaaatgggtggtctgacgtgcgcccgaagc
tgcccggactccccgttcctgtttgccatgggaggagagaaggacagtctgagggtgtgg
agtgtcatggacagtgggaacacagcagtgcaaacaagatttgaaggcagacccagacca
cagctccccacccaaacaccatcagagatgacttcagctgaccagccagaaatgtaa
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