Branchiostoma floridae (Florida lancelet): 118418184
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Entry
118418184 CDS
T01074
Name
(RefSeq) roundabout homolog 1-like isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
118418184
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bfo04515
]
118418184
Cell adhesion molecules [BR:
bfo04515
]
Immunoglobulin superfamily
ROBO family
118418184
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
FN3_DSCAM-DSCAML_C
Unc5_NetrinR_N
Ig_PDGFR_d4
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
118418184
NCBI-ProteinID:
XP_035679918
UniProt:
A0A9J7LBR2
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All DBs
Position
1:complement(20993990..21072459)
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AA seq
1703 aa
AA seq
DB search
MDCKMTRILLQAVIAVLVLRTAKATRYQQDDFPPRIIEHPSDIIVPKGEPATLNCKAEGQ
PTPTIQWFKDGQPVETDLENARSHRMLLPSGSLFFLRIIHGRRSKPDAGRYQCVATNYLG
RAVSNNATLEVAVLRDDFKENPRSLTVAVGEPAVLQCDPPRGYPEPRITWEKNGLVVRNE
GERIRVLESGKLMISEVKKSDAGTYVCIGTNMVGRRVSEQATLSVYVKPSFSEAPEDVTA
IVKEDVEFKCKVRGDPAPQVSWSREESALPLGRARILDNKNLKIERVTSADEGTYVCTAE
NLVGRVEGKATLTIHERPTFKTKPRDQVIGLNRIATFLCETAGNPPPAVFWQKEGSQVLM
FPNQNHGRFKVTSNGELIISGVQKADEGWYVCSALSVAGSETERAYLKVAVLSDRPPPII
RQGPTNMTLNIGELAMLPCQASGNPAPSIRWLKDSNPILATDHRIMLLDRGTLQISDVRI
GDSGMYTCIASSESGETTWTASLNVHEPTDPSQIFPPRLQPESSDLPGPPNKPVISNITK
SSLRLTWRPSAKSGASEVRSYTVEYFSHDLGTGWVTVASDVRSTTYMVRNLRTATSYMFL
IRAQNGQGLSLPSPVSDAIRTKGDSAIPTLSPEDQQLVEQKLRSVQIEMRQPVAISSTEI
QVNWQVRNFKGLERYLQGFHIMYRPSYSNAPYSTETVTDKRASTAVVNGLAKFTSYDIMI
QPFFNERHQGPPSSPVTSKTLEDAPSAAPQGVTATLATKDSIRIQWDAIPRDKANGVIKG
YQVWCLGNETRFHKNMTTNMTSVVIRDLIPGMLYRIEVAAFTTAPGYGPSSEHRYIQMDP
NLMASPGEVSLSLAQQISDVVKTPAFIAGIGAFFWLALLIFSIWLYRRHKKKKSALRGDI
GGSGTVPNYLSTLLHSFIYTPAVNLNRDRDNAAALADSNHHHHQHWLDQSWPNTSAHHHP
NQTGCTMTTCCSGSGGSISEMGNNTTGRKFDINDMVYDNLGKEKAKMQPEVETGVPPYMV
HNANMPPDVESLPEYAEVGNQPHLKTFLTKQQNMNHLGSPAPYASTSVVDTNLNENLNLE
KSVSENGSEKWMPTFTRGKRKNGRRTPDAYTPDHKVNNDMYPQENSEGSQMSTSLSNPMY
DNRPRSPYSDGSATDDSSRRRRRAQNKPPPSAAKQAGPPLNWADLLPPPPEHPPPSEVDS
PPGTPPRSPYSSSHRSDRSSKRPPCTTSPSHLSDKSSSDRGPTPPARTYRHNNSDLSSPE
ERGPTPPKRTVNVPPSPDHRPTPDSPNTDVTLPCLPAHLEDTGQGPGLRIELPGYGYLDA
PSDADTSVRDEDFENRDYDRERHLGEQTPASSMGDLESSVTGNRDLLDQADVDALDTDFD
GFDTSEVEAIDSLEPSEFDALDGPDNDFLLYYLQFQKLLDSWENMERNRRSKPKSLKPPR
ENGRRYSDSMIAGWASATDDNDSVTSASNRSSAAESSDGSFFTDADFASAVAAAAESAGL
TVQGSVVSDPNAGKKQFPGALRHKRSGSPFSTDSNASAALAQKPRPHPPSHRRRQDQSRS
DSDGPSLNIGGDIAPSSESEQSSRPKTRPDVSRKPAPNRRQRQEPEELYYTSPHHHEWGG
QLSPRNVYRDELSSYGRGTTTAGTNTPPMSPNSTSSRGSTGRRRERTPSNQGSLRNGSSG
RDGSSDGGYVQANPIAFENKHAC
NT seq
5112 nt
NT seq
+upstream
nt +downstream
nt
atggattgcaagatgacaaggattctcctccaagcagtcatcgcagtgctggtgctgagg
acagccaaagccacaagatatcaacaagatgacttcccacccaggattatcgagcacccc
tcggacattatcgtgccaaagggcgagccggccaccttgaactgtaaagcggagggccag
cccacgcccaccatccagtggttcaaggatggtcagcccgtggagacggacttggagaac
gccagatcccacaggatgctgctccccagcggctcccttttcttcctcagaattatccac
ggtaggagaagtaagccggacgcaggacggtaccagtgcgtagctaccaactacctcgga
agggcagttagcaataatgccacattagaagtagcagtattacgggatgacttcaaggaa
aatccccgtagccttacagttgcagtcggagagccagcagttctacagtgtgaccctccc
cgtggctatccggaacctagaataacatgggaaaagaatggattagttgtaagaaacgaa
ggagagagaatacgagttctagaatcgggcaaacttatgatatcagaggtgaagaaaagc
gatgcagggacatacgtttgcatagggaccaacatggtcggaagacgcgtgagtgaacag
gccacgctgtccgtttatgtgaaaccttcattttctgaggcgccagaagatgtcacggct
atcgtcaaggaggacgttgagttcaagtgtaaagtacgtggcgaccccgctccgcaggtg
tcatggagtcgtgaggagagcgcactccctcttggaagggccagaattctggacaacaag
aacctgaagatagagcgggtgacttcagccgacgaaggcacgtacgtttgcacggcggaa
aacctggtgggaagagtggaagggaaagccacacttaccatccacgaacggccgaccttc
aagacgaagccccgagaccaggtgatcgggctgaacagaatagccaccttcctgtgtgag
acagccggaaaccctcctcctgctgtcttctggcagaaggaaggaagtcaggtgctgatg
ttccccaaccagaaccacggccgcttcaaggtgaccagtaacggagaactgatcatctcc
ggtgtacagaaggctgacgagggctggtacgtgtgctcggccctcagcgtcgcagggagc
gagaccgagagagcctacctaaaagttgctgttttgtcggacagaccaccacccatcatc
agacaaggccccaccaacatgaccctgaacattggtgagctggccatgctgccctgccag
gcgtcgggcaaccctgcacccagcatcaggtggctgaaggactccaaccccattctggcc
actgaccaccgcatcatgctcctggacagaggcactctgcagatatctgatgtccgaatt
ggtgactcgggtatgtacacctgcattgcttccagcgagagtggggagaccacatggacg
gcatctctcaacgtccacgaacctacggatccctcacagatatttccacccagactccag
cctgagtcctcggacttgccaggccctccaaacaaacctgtcatcagtaacatcaccaag
tctagcctccgcctgacctggagacccagcgccaaaagtggagcttctgaagtcaggtca
tacacagtggaatacttcagccatgacttgggaactggctgggtgactgttgcctcggat
gtgcgcagcactacttacatggtcaggaacctgcgtaccgccacatcctacatgttcctg
attcgtgcacagaatggccaggggctcagcctccccagccctgtcagcgatgccatcaga
acaaaaggagactcagccatccccaccctgagtcctgaagatcagcagctggtggaacag
aagctacgctctgttcagattgagatgagacagccagtagccatcagttcaactgaaatc
caggtcaactggcaggtgaggaacttcaaggggctggagcgttatctgcagggcttccac
atcatgtaccgtcccagctacagcaacgccccctactccaccgagacggtgacggacaag
cgggccagcacggccgtcgtgaacggcctggccaagtttacctcatacgacatcatgatc
caacctttcttcaacgagagacaccagggtcctcccagtagccctgtcacttccaaaacc
ctggaggatgccccatctgctgccccccagggggtgacggcgacgctggcaaccaaggac
agcatccgcatccaatgggacgccatccccagggataaggccaacggagtcatcaaagga
taccaggtgtggtgccttggtaacgagaccaggttccacaagaacatgaccaccaacatg
acctctgtggtgatccgtgacctcatcccaggcatgctgtacaggatcgaggtggcggcc
ttcaccacggcgcctggctacggtccctccagcgaacacagatatatccagatggacccg
aatctgatggctagcccaggcgaggtgagcctcagcctggcccagcagatcagtgacgtg
gtcaagacacccgccttcatcgccggcatcggagccttcttctggttggctctcctcatc
ttcagcatctggctgtaccgccgccacaagaagaagaagtcggcgctccgtggtgatatc
ggcggcagtggtactgtgccgaattacttgtctactttgctccactcgttcatttacacc
ccagcagtaaatcttaatagagacagggataatgctgcagcactggcagacagcaaccac
caccatcaccagcactggttggaccagtcatggccgaacacgtcggcacatcaccacccc
aaccagacgggctgcaccatgaccacctgctgtagcggtagtggcggctccatcagtgag
atgggcaacaacaccacggggaggaagtttgacattaacgacatggtgtacgacaacctt
gggaaggagaaagccaagatgcagcctgaggttgagacgggcgtgccaccttacatggtc
cacaatgccaacatgcctccggatgtcgagagcctcccggaatatgccgaggttggaaac
cagccccatctcaagaccttcctgaccaagcagcagaacatgaaccacctgggctccccg
gccccctacgcctccacctccgtggtcgacaccaacctgaacgagaacctgaacctggag
aagtcggtgtctgagaacgggagcgagaagtggatgccgaccttcacgcgggggaagagg
aagaacgggaggaggacgccggatgcgtacacacctgaccacaaagtcaacaatgacatg
tatccccaggagaactcggaaggcagtcagatgtccacctctctgagtaaccccatgtat
gacaacaggcccagaagcccttacagtgatgggtcagccacagatgactcctcccgtcgg
cggaggagagcacagaacaagccgccgccctcggcagccaagcaggcggggcccccgctg
aactgggcagacctgctgccccctcccccggaacatccaccacccagcgaggtggactcc
cctcccggtaccccgcccagatctccctactcctcctcacacaggagtgacaggtcatca
aagagacctccctgcaccacctctcccagccatctgagtgacaagtccagcagtgaccgt
ggacccaccccaccagctcgcacatatcgacacaacaactcagacttgtcttcccctgag
gagcgtggccccacccctccgaaacgaactgtaaatgtacctccctcccccgatcacaga
cccaccccagattcccccaacaccgacgtgacgttaccgtgcctgccggcgcacctggag
gatacggggcaggggccggggctgagaatcgagctgccggggtacggctacctggacgct
ccgtcggacgcggacaccagcgtgagggacgaggacttcgagaaccgtgactacgacagg
gaacgccacctgggggaacagacgcctgcttccagcatgggagatctggaaagcagcgtc
acaggtaatagagatctccttgaccaagcagatgtagatgcattggacaccgactttgat
ggttttgatacatcagaagttgaagctattgacagtctggaaccatctgaatttgatgcc
cttgatggtcccgataatgactttctcctctattacttacaattccaaaaacttttggac
tcgtgggaaaacatggaaagaaatcgcaggagtaagcccaaaagtctgaagcctccgcga
gagaatggcagaagatactcagactcgatgattgctggatgggcctcggctactgatgac
aacgacagcgtgacgtcagccagcaacaggtccagcgctgcagagtcgtcggacgggtcc
ttcttcacggacgcagactttgccagtgcagtagcggcggctgcagagagtgcagggctt
acagtgcagggttctgttgtctccgatcctaatgcaggtaaaaagcagttcccgggagcc
cttcgacacaagaggtcgggcagccccttcagtacagatagcaatgcgagcgcagccctg
gcccagaagccccgtccacacccgcctagtcacaggaggagacaggaccagtccagatct
gactctgacgggccctcactaaacataggtggagatattgcgccctcgtcagagtctgag
cagtcttcccggcctaaaacacgaccggacgtcagccgcaagcccgcacccaacaggagg
cagcggcaagagccagaagagctctactataccagtccccaccaccacgagtggggaggg
cagctctctccgagaaacgtctatagagatgagttgtcgtcgtacggtcgtggaacgacc
accgcgggcaccaacacgccaccgatgagcccgaacagcacgtcatccagaggctccacg
gggagacggagggagcgtacgccgagcaaccaggggagcttacgcaacggcagctccggc
agggatgggagcagtgatgggggttatgtacaggctaaccctatagctttcgagaacaag
catgcttgttga
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integrated database retrieval system
