Branchiostoma floridae (Florida lancelet): 118418283
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Entry
118418283 CDS
T01074
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8-like isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bfo03036
]
118418283
Chromosome and associated proteins [BR:
bfo03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
118418283
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
Chromo_MIT1
DEAD
HTH_CHD1_Hrp3
HDA2-3
Myb_DNA-bind_7
MUN
Motif
Other DBs
NCBI-GeneID:
118418283
NCBI-ProteinID:
XP_035680023
UniProt:
A0A9J7LBX4
LinkDB
All DBs
Position
6:11891013..11939593
Genome browser
AA seq
3029 aa
AA seq
DB search
MSEPSMLGSLFEDDINLMGDLAGIGGEFPPQAGQPMQPMVPPPPHAAAGGMGMPPHMGQG
DQMMVQQQAHPGFAQLQAAQPSPQQKLQHYGDFGQYPQQQQQQQKLHHMNPQGMMGSPQH
SQQVLSPRHHAMTSAQPRMPSPHQYPQNMAAQQVQRTDPRFQSYAMQRGLHPGMQPGMNG
GTAVSHQNMWPGQQQGQPRPPAQPYNGMPGQHPGVQHPGMTPYLSHHDYALQPQQQRLHH
YPQSAGPQQIRSGMPGQGDPYMAGTSRLTHMPGGQHMPGTTAGPTTPNRQRHPSATPHYP
STSQQMSPMRQQMSQPTSQPVPPSFPQSQHPQMRDLNAFSPNHPSQVAADQRQRNNSGQM
NINVNTSMNKLQHYPYPSQDPSHPGMAPNMMPPQGEQGAPRLSHFTENSQGRQEQFLPQY
PGMGQHRAPTPTSMTATGPHPYPPQSMPAASQDPAHKQQNVPTSAPYPYQSGPPTSQGFS
QGAIPRSSQAPPSSLQQLEQLMPPQSQSAQGTHPPHSQSGNFPPMEQSVPASGAGHNPPQ
PFNVGPEFPQQGHTNSPQPNQNMSPAHYELQQLSQQLQFEYNLPPHQRNPEKIGHLQERV
RVLQNQINMGQQQQQQQQQQQQQQQQANQFSQPTPPPSHQDKDMDDDERQRLSKAQQAQE
KAARICAEAMHKAKQSGVSEVPRVVTPPGLPPGMSSQLENKPSKPSTPNPKDKDKKKKPP
AKSSSKSKSSKSKAKAVKMPPATLFKGKKRKRKDDSDGSDLDATPPPSPSAEDSLVEKRR
STRNVKRKTYIDDFHLSGDEEEPVVDVVSGGGGDVTFQQPIPFYVVRNENPNEDDAVIVE
KILSYRLHKDEHSTEEAQQPGTEQYYVKYKNFSYLHCEWKTVPELEKDKRIHQKIKRFWA
KRSTVNVFEQFDEDPFNPDYVEVDRVLDMATNTDPNNGQPVTHYLVKWQQLPYEDSTWEL
EEDIDTNKLEQYHYFKQPPAPEDREAKPRPEPESWHQLDPNVTYKNDNKLREYQMEGVNW
LLFNWYNRRNCILADEMGLGKTVQSITFLKEIQEQGILGPFLIIAPLSTIANWQREFETW
TNVNVVVYHGSSASRQMIHRYEMFHRDELGNIIPECYKFQSLITTYEVIISDCLELRDIP
WRAVIIDEAHRLKNRNCKLLEGLKILDLEHRVLLTGTPLQNNVEELFSLLNFLEPDQFDS
EADFLSEFGDLKTEDQVSKLQALLKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYY
RAILERNFTFLAKGCGSSSNVPNLMNTMMELRKCCNHPYLINGAEEKILGEYKDQHGENH
GKYLHCMVQASGKLVLIDKLLPKLRAGGHKVLIFSQMVRCLDILEDYLVQNVYPYERIDG
RVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTVIIFDSDWNPQNDLQAQA
RCHRIGQSKSVKVYRLLTRATYERDMFDRASLKLGLDKAVLQSMRDNVSGARETQEKQQL
SKKEIEELLRKGAYGALMEDNDADKFCEEDIEQILQRRTQVITIESEGKGSTFAKASFVS
RENRTDINIDDPDFWKKWAKKADLDMEELNRDDRIIEMPRVRKQTKRYATSATDDMLDFS
DSDTIEPDAESEGGGKGKKGKKDKGKSSTRSGHGSGWSRVECFRVEKNLLVYGWGRWSDI
LRTGRFKRNLSEQEVESIARTMLMYCLQHYKGDEKIKAFIWDLIAPPVDGAVKSYKNHLG
LSAPVPRGRKGKKKKDNKSLPTVDMEWAQKINTEELLQDPGYKRHLQHHCNKVLLRVRML
YYLKQEVIGEFSAAIWGGTNHTSLDIQVPIPEGEPPIGWWDEEADKSLLIGVFKHGYEKY
SSIRADPTLCFLSRCGPPDGKVMAAEQAQEDDDVGFNDDDQDPEYKPKRKPFQDDEEDSD
PDSPMYGDDDDEDTPRKSRRRRQPIMDTIDPAVNDGKLPFPTPSDMNTRLRRIITSYQRS
HKKQQLKAAMREKKEQLRKERFEEAIRQKELRRREMAQRWSRREEADFYRVVSTFGVEFD
RTKQQFAWDRFRSIARLDKKYDQNMTEYYLAFRSMCERVCGRRRKSEEEQHMNLYVEPIT
EERASRCLFRIDLLRKVREEILPHLQLEERLKLCLPSHDLPDWWECGKHDKDLLLGMSRH
GVSRTEYHILGDPHLSFAEIYKKHSHARLASIPVAQQLPPNPAHLPVPAVKEPKETPSLP
NGLAGLASLSPPILKPELPPTLTKMDDLSPKAEPHGEVKEESFPMDLDMKKETDVKPVVK
TEDTKPVIKEEVKQETESKPSLSILERELAKSESEEGNHEQEQLKQEKDDSMSLLEQELA
KPEKEESLLERELAKPLEMDGLGLKAEEDSLSSAPLLKPVYQDGEDSQHSFSMDGMGEPT
VAQLLSHMQQLRWPKDKILIQRCDHICQAVLNGKWPVTRRIIMEPVTPITPRSLDSGAEN
SGAATPLGSGTEGMDTTPGDASRFIVKRRKRRKRAEIEADKEAKRRLADMMYEEMRRKMQ
QASAGTLPSDDQPQDLSMPRSTSFDSAASLAASKNALLKSQDSLLRSPGSLPVMAHKVLP
TSSAHDGLALSLAGLVNGVEVPVKKRRGRKPKHDKEEKPKKTKIIINENGEAIEVEVKRR
RRKRKHRELEPWSPSRLGPDVPIPVVNKVKGERLSGLAAPLNCDLLDWLKEHPDWEVDYP
PPPSPQEDGVMPQPDMEGMPKMKKKRHRCPNPNKLDPDNLSGEERVMVVNRKTGKKIGGL
AAPQLMDLDEWLNKNPGFDIAADWEHIAKKYLPVDQHHRIQKNSGKTDTAVTAPFPQQPF
GGLMAATRDMQLPAGMAGLAGLSAMTPFPGLPGMAMPPMFGFGGLGLPLPTSSTSTTSPK
TDSSPQEKASPSSTAAATGTSATSTATSLPTPLVMPGQQGLFWPNPFMMNPAFLPGFLHT
GLANGIAAPNAEERDSLGSLSPQSVKSEGTHSAPSEPVSPSSASPSKANVTERTNGDNGN
SNNNNSNVISEDTLSPQEEEELNSAEAST
NT seq
9090 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagccttctatgctgggaagcttgtttgaggacgatatcaacctgatgggcgac
ttggcagggattggtggggagtttcccccgcaggcaggacagcccatgcagcccatggtc
ccccctccccctcatgccgccgcagggggaatggggatgccaccacatatgggccagggg
gatcagatgatggttcagcagcaggcccatcccggttttgcacagcttcaagctgcacag
ccctccccacagcagaaactgcagcattacggagacttcggccagtaccctcagcagcag
cagcagcaacagaagcttcaccacatgaacccacaaggcatgatgggcagtccgcaacac
tcccaacaagtattgagcccacgtcatcacgccatgacttcggcacaacctcggatgcct
tcgccccaccagtatccgcagaacatggccgcccagcaggttcagagaacagatcctcgt
ttccagtcgtatgctatgcaaagaggcctgcatcccgggatgcagcctggaatgaatggt
gggaccgcagtttctcaccagaacatgtggccaggacagcagcagggtcagccccgtcca
cctgcacagccgtacaatggcatgccaggacagcacccaggtgtgcagcaccctgggatg
actccatacctgtcccaccatgactatgcactgcagcctcaacaacagaggctgcaccac
tacccccagtccgcagggccgcagcagatccggtccggcatgcccggccagggcgaccct
tacatggcagggacaagtagactcacacacatgccagggggccagcacatgcctggcacc
acggctggtcccaccacacctaacagacagcgtcacccaagtgcaactccacactaccca
tctacctcacaacaaatgagcccaatgcgtcaacaaatgtcacagcctacatcacaacct
gtgcctcccagcttccctcagagccagcatccccagatgagggatctgaatgccttttct
cctaaccaccccagccaggtggccgcggatcagaggcagcgcaataactcagggcaaatg
aatataaatgtgaatacaagtatgaacaaattgcagcattatccgtatccaagccaggac
ccctcacaccctgggatggctccaaacatgatgccaccacagggtgagcagggagctcct
cgcctttcacactttacggaaaacagtcagggtcgtcaggaacaattcctgccacagtat
ccaggaatggggcagcaccgtgccccgactccaacgtcgatgactgcaactggtccacat
ccatatccgccccagtctatgccggcggcatcccaagatcctgctcacaagcagcaaaac
gttcccacaagtgcaccttacccgtaccagtcggggccccctacatctcagggttttagc
cagggggctattccgaggtccagccaggcaccaccatctagtctccaacaactagaacag
ctcatgcctccccagtcccagtctgctcagggtacccacccgcctcactcccagtcaggg
aacttcccgcccatggagcagagcgtaccagccagcggtgccggacacaacccgccgcag
ccgttcaacgtcggccccgagtttcctcagcagggtcacacaaacagcccccagcccaac
cagaacatgagcccggcgcactacgaactgcagcagctcagtcagcagttacagttcgag
tacaacctgccgccccatcagcgcaaccctgagaagatagggcacctacaggagagggta
agggtgctgcagaaccagataaacatgggacaacaacaacaacagcagcagcagcagcag
caacaacaacaacagcaggctaatcagttctcccagcccacccctccaccatcccaccag
gacaaggacatggatgatgatgagcgccagcgcctcagcaaggcccagcaggcgcaggag
aaagccgctcgcatttgtgctgaagcgatgcataaggccaagcagtcaggtgtttccgag
gtcccccgggtggtgacaccgccgggccttccacctgggatgtcctcccagctggagaac
aagccctccaaaccctccacacctaatcccaaggataaggacaagaagaagaagccacct
gcaaagtcttcatccaagtccaagagcagcaaaagcaaggccaaagctgtgaaaatgcct
ccagccacattattcaagggcaagaagcgaaaaagaaaggatgactcggacggatcggat
cttgatgcgacgcctccgccgtcccccagtgccgaggatagcctggtggagaagcggcgc
tccacgcggaacgtgaagcggaagacctacatcgatgatttccatctgtccggtgacgag
gaggagcctgtggtggatgttgtgtcaggaggaggaggggatgtcaccttccagcagccc
ataccattctatgtggtaaggaacgaaaatcctaatgaggatgatgctgtcattgtggag
aagatcctgtcctacaggcttcacaaagatgagcactccactgaagaagcacaacaacca
gggacagaacagtactatgtgaagtacaagaatttctcgtatcttcattgcgagtggaag
acagtgcctgaactggagaaggacaagagaattcaccagaaaatcaagcgtttctgggcc
aagcgctccacagtgaatgtgtttgaacagtttgatgaagacccattcaacccagactat
gtggaagtggacagagtgttggacatggcgaccaatacagaccccaacaatggacagcct
gtgacacactacctggtgaagtggcagcagctgccttatgaggatagtacctgggaactg
gaggaggacattgacaccaacaagctagaacagtaccactacttcaaacagcctccagca
ccagaagatcgggaggctaagcctcgcccggagccagagtcgtggcatcagctggatccg
aacgtgacctacaaaaatgacaacaagcttcgagagtaccagatggaaggtgtcaactgg
ctcctcttcaactggtacaacaggcgtaactgtatacttgctgatgagatgggcctggga
aagacagtccagtctatcaccttcctgaaggaaatccaggaacagggcatcctgggaccc
ttcctcatcattgccccactctccaccattgcaaactggcaacgggagttcgagacatgg
acgaacgtcaacgtagtggtgtatcatggaagctctgctagcaggcagatgatccaccga
tatgagatgttccacagggatgagctgggcaatattattccagaatgctacaagttccag
tcactcatcacaacatatgaggttatcatctccgactgtctggagctgcgtgacatcccg
tggagggctgtcatcattgatgaggctcaccgactgaagaacaggaactgcaaactgctg
gagggactcaagattctagacttggaacacagagtgttgctaacaggcacccccttacag
aacaatgtggaggaacttttcagcctgctcaacttcctggaacctgaccagtttgactcg
gaggcagacttcttgtccgagtttggagaccttaagacagaagaccaggtgtccaagttg
caggccctcctgaaacccatgatgttgagacgactaaaggaggatgtggaaaagaacctg
gctcccaaggaggagacaataatcgaggtggagttgactaacatccagaagaagtactac
cgtgccatcctggagagaaacttcaccttcctggccaagggctgcggctcctcctccaac
gtacccaacctcatgaacaccatgatggaacttcgcaaatgctgcaatcacccctacctc
attaatggagctgaagagaagattctgggagaatacaaggaccagcatggtgaaaaccat
ggaaaatacctccactgcatggtgcaggcttcaggaaaacttgtgctgatagacaagctg
ctacctaaactcagggcaggtggacataaggtcctgattttctcccagatggttcgttgt
ctggacatcctggaagactacctggtacagaacgtgtacccttacgagcggatcgatggc
cgcgtcagggggaacctgcgacaggccgccatcgacaggttcagcaagccagactcagac
aggtttgtgttcttgctgtgtacacgagctggaggtctggggatcaacctgacagcagca
gacacagtcatcatcttcgactcggactggaacccacagaacgatctccaagctcaagcc
aggtgtcatcgtatcggccagtccaagtcagtcaaggtgtacaggttgctgaccagggcc
acgtacgagagggacatgtttgaccgagccagtctgaagctggggctggacaaggctgtg
ctccagagcatgagggacaatgtttcaggggccagggagacacaggagaaacagcagctg
tccaagaaggagattgaggagctgctgaggaagggtgcgtacggagccctcatggaggac
aatgatgcagacaagttctgtgaggaggacattgagcagatcttacagaggagaactcaa
gtcatcaccattgagagtgagggcaagggctcaactttcgcaaaggccagttttgtgtca
cgtgaaaaccgtacagacatcaacattgacgaccctgacttctggaagaaatgggccaag
aaagcagacttggacatggaggagttaaacagggatgacaggatcattgagatgcctcgt
gtgcggaagcagaccaagcggtacgccaccagcgcaaccgacgacatgttggacttcagt
gattccgacaccatcgagcctgacgctgagtcggagggtgggggaaaaggaaagaaggga
aagaaggacaaggggaagtcgtccaccagatcaggacatggctctggctggagtcgggtg
gagtgctttagagtggagaagaatctgctggtctatggatggggcaggtggtctgacatc
ctgcgtactgggcgcttcaagagaaacctgtcagagcaagaagtggagtctatagccagg
accatgctgatgtactgtctgcagcactacaagggtgatgagaagatcaaagccttcatc
tgggacctgatcgctcctcctgtggatggtgctgtcaagagctacaagaaccacttaggt
ctgtcagctcctgtgcctcgtggacggaagggtaagaaaaagaaggacaacaagtccctg
ccgaccgtagacatggagtgggcccagaagatcaacacagaggagctcctgcaggaccct
gggtacaagaggcatctccaacaccactgtaataaagtgctgctgagagtacgtatgctg
tactacctgaaacaggaggtgattggagagttctccgcggccatctggggaggcaccaac
cacaccagcctggacatccaggtgcccatccccgagggggagcctcccattggctggtgg
gacgaggaggccgacaagtcgctccttattggggtcttcaagcatggctatgagaagtac
agctccatccgggcggaccccacgctgtgtttcctgtccaggtgtgggccaccggacggg
aaggtcatggctgccgagcaggcccaggaggacgatgatgtgggcttcaatgatgatgac
caggaccctgaatacaaaccaaagaggaagcccttccaagatgatgaggaggattctgac
cctgatagcccgatgtacggagatgatgatgatgaggacacacctaggaaaagcaggagg
cgcaggcagccaatcatggacaccatcgaccccgcagtcaatgatgggaagctgccattc
cccaccccatcggacatgaatacccgtctccgccgtatcatcacttcttaccaacgaagt
cacaagaaacagcaactcaaggctgccatgagggaaaagaaagagcagctgcggaaggaa
cgctttgaggaggccatcagacagaaggagctgaggagaagagagatggcacaaagatgg
tccagaagagaggaggcagacttctatcgtgtggtgtccacgtttggcgtggagtttgac
cgcaccaagcagcagtttgcctgggaccgcttccgcagcatcgcccggcttgacaagaag
tatgaccagaacatgacggagtactacctagccttccgctccatgtgtgagcgtgtctgt
ggccgcaggaggaaaagtgaggaagagcagcacatgaacctgtacgtggagcccatcaca
gaggagcgagcgtcgcgctgcctgttccgtatcgacctgctgcggaaggttcgtgaggag
atcctgccccacctccagctggaggagaggctgaagctgtgcctgccctcacacgacctt
cccgactggtgggagtgtggcaaacatgacaaggacttactcctaggaatgtctagacat
ggagtcagccgaacagagtaccacatcctcggtgacccgcatctctccttcgctgagatc
tacaagaagcactcccatgctcgactggcaagcatccctgtcgctcagcagctcccgccc
aaccctgctcaccttcccgtcccagcagtcaaggaacccaaggagaccccctccctccct
aacgggctcgccggcctggcctccctctccccacccatcctcaagcccgagcttcccccc
accctgaccaaaatggatgacctgtctccaaaggcagaaccacacggggaagtgaaggag
gaatcgttcccaatggatctagacatgaagaaggaaacagatgtcaaacctgtggtgaaa
acggaggacaccaaacctgtcatcaaagaagaagtgaaacaggagacggagagcaagcct
tccttgtccatcctagaacgggagctggcaaagtcggagagcgaagagggtaaccacgag
caggagcaactcaagcaggagaaagatgacagcatgtctcttctggagcaggagttggcc
aagccggagaaggaagagtctctcctggaacgggaactcgccaagccgttggagatggat
ggcctgggcctgaaggcggaggaggactccctgagctcagcacctctcctgaaaccagtg
taccaggatggggaggacagtcagcacagcttcagtatggatggcatgggggaacctacg
gttgcacagctgctgtcacatatgcagcaactcaggtggcctaaggacaagattctgatc
cagagatgtgaccacatctgtcaggctgtgttgaacggaaagtggcccgtcaccagacgt
atcatcatggaaccggtcacacccatcacccctcgcagcctggacagtggtgcagagaac
agcggggcagccacgccgctggggtctggaactgagggcatggatactacaccgggtgat
gctagcaggttcattgtcaagaggaggaagagaagaaagagagctgagatagaggctgac
aaggaggcgaagcggcgcctggcagacatgatgtatgaggagatgagaaggaagatgcag
caggccagtgccggcacactgccctcagacgaccagcctcaggacctcagcatgcccagg
tcaacctccttcgactctgccgcctctctggctgcctccaaaaatgccttacttaaatct
caggattccttactcagatcaccaggctccctgcctgtcatggctcacaaagtcctccct
acgagctctgcccacgatggactggccttgagcttggctggtctggtcaatggggtggag
gtgcctgtgaagaagaggagagggcgcaagccgaaacatgacaaggaggaaaaaccaaag
aagaccaagattatcattaatgaaaatggagaagctatagaggtggaggtgaagaggaga
aggagaaaacgtaaacacagggagttggagccgtggtctcccagcagactgggaccagat
gtgcctattccagtggtcaacaaggtgaagggagagcgtctgtctggcctggcagcccct
ctgaactgtgacctcctggactggctgaaggagcaccctgactgggaggtggactatcct
ccacccccctccccacaggaagatggagttatgcctcagccggatatggaggggatgcct
aagatgaagaagaagcgccatcgctgccccaaccccaacaaactggacccagataacctg
tcaggagaggagagggtcatggtcgtcaacaggaagacaggaaaaaagattggtggtctt
gctgccccacagttgatggatctcgatgagtggctgaacaaaaatccaggttttgacatt
gcggcagactgggaacacattgcaaagaaatacctcccggttgaccagcaccacaggatc
cagaagaactcagggaaaactgacactgcagtcaccgccccgttcccccagcagccgttc
ggaggcctgatggcagccaccagggacatgcagctgccagcgggcatggccggcctggcg
gggctgtccgccatgacgcctttcccagggctcccagggatggccatgccacccatgttc
ggcttcggcggcctggggctgcctcttccaacatcttctacctcaactacctcacctaaa
accgattcatcgccacaggagaaggctagtcccagttccacagcagcggccactggaacg
tctgcaacatcgactgccacctccctccccaccccactggtcatgccgggacagcagggc
ctgttctggccgaaccccttcatgatgaacccagccttcctgccgggattcttgcacaca
ggcttggctaacgggattgcagcgccaaatgcagaggagcgcgattccttgggaagcctg
tccccacagagcgtgaagtctgagggcacgcactccgcgccgtcagaaccagtgtctcca
agctcagcatcgcctagcaaggcaaacgtaaccgaaaggactaacggggacaatgggaat
agcaataacaacaatagtaatgtcatcagtgaagacactctgagtcctcaggaggaagaa
gagctgaatagtgccgaggcttccacatga
DBGET
integrated database retrieval system
