Branchiostoma floridae (Florida lancelet): 118418780
Help
Entry
118418780 CDS
T01074
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3-like
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfo03400
]
118418780
Enzymes [BR:
bfo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
118418780
DNA repair and recombination proteins [BR:
bfo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
118418780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
AAA_30
Helicase_PWI
Motif
Other DBs
NCBI-GeneID:
118418780
NCBI-ProteinID:
XP_035680710
UniProt:
A0A9J7LEP4
LinkDB
All DBs
Position
7:11625347..11665383
Genome browser
AA seq
2165 aa
AA seq
DB search
MVQLPRLTSALRAFSGVSSGSEANGTNTISLQEKRQLQSARLSKSEVTLDTLTAELLKRC
VRGQEHQLQADVKELCHAASAIVGDIGVEYIHDAAVVLFRTLSPVDKVGREETSKLRAIF
GPFPASAVNKAMKSVKDICSCLSEGSLNSLTCFSSRQSQEIKEFGQGIHFSHEGLKLVTL
SERPGTEPKSAHMNREDFSAANANINGAAESLFTEAWLFERLQQIFGEGSEFGAGLPPGE
LCDTLIDILSTSQSDSVLQNELFELLGSGCLDLIQDLLDHRSELVQSAASQRQRELRGSV
DVSGIAGKKTPIVAPTVTVQSEKERQLLKQYRKDERRMAKKDVTNQQGAASNRFDPRDLR
AHREALLQEATATPLFSDPYAELRPIRYPNVYDSFSEARKSSSFIGGCKMILPAGFERKV
SNMYEEVSIPPSDPPPLTIGNDRINISQLDEIAQLAFQGMKKLNRVQSVVCEMAYGTNEN
LLVCAPTGAGKTNVAMLTVLHELMQHVQHGVLQKKDFKIIYIAPMKALAAEMVSTFGSRL
QALGVAVRELTGDMQLTKREIVETQMIVTTPEKWDVVTRKSTGDVALAQAVRLLIIDEVH
ILNDDRGHVIESLVARTLRQVETSQSMIRIVGLSATVPNYLDVARFLNVNPEKGLFFFDS
RFRPVPLRQTYIGIKSTSRMQQLQDMEQVCYDKVEHMVRQSHQVLVFVHARNATVRTATA
LRDMATSSGNGSIFCSQQSPEYGAAEKQVNRSRNKQLRDLFPDGFGIHHAGMLRQDRNLM
ERLFSRGLIRVLVCTATLAWGVNLPAHAVVIKGTQIYDAKRGSFVDLSILDVMQIFGRAG
RPQYDTFGEGVILTTHDKLSHYLSLMTQQTPIESQFIQNLTDNLNAEVSLGTVTNVEEAV
RWLSYTYLYVRMKANPLAYGISYTNAQKDPDLEEFRRELIVAAGRQLDKARMIRFEERTG
YLHPTDPGRTASHFYIKHDSVQVYNEFLKPLMTESDILAMVAKSHEFDQIKVRDDEMSEL
DELLDSVCPLPVPGGVENSYGKVNILLQTYICRHRVDSFSLMSDMAYVVQNAGRILRGLF
EITLRKGWPLMAGKLLELSKVVDRQLWPFEHPLHQFSILSKEILHKLEARSLSVHRIKDL
QADEIGRMIHHVRMGKMVKQAVYQLPSLELDAAIQPITRTVLRVRLTISPTFTWNDRVHG
TVSEPWWIWVEDPENHHIYHSEYFLIQKKQVKTEEAQTLVFTIPIFEPLPSQYYVRAISD
RWLGAEAMCAISFQHLILPERHPPHTELLDLQPLPVTALRDPSLESLYNFTHFNPIQTQI
FHTMYHTDTNALLGAPTGSGKTVAAELAIFRIFREYPKTKAVYIAPLKALVRERIEDWKI
RFEKKLGKRVVELTGDVTPDMKAISQSDVIVTTPEKWDGVSRSWQTRSYVKAVTLLIIDE
IHLLGEDRGPVLEVIVSRTNFISSHTDRSVRVVGLSTALANARDLADWLGINQLGMFNFR
PSVRPVPLEVHIHGYPGKHYCPRMATMNKPTFQAVRTHSPLKPALVFVSSRRQTRLTALD
LIAFLAVEDNPKQWLHMPENEMEAVIKHVNDNNLKLTLAFGIGLHHAGLHERDRKTVEEL
FVHQKIQVLIATSTLAWGVNFPAHLVVVKGTEYYDGKTCRYVDFPITDVLQMMGRAGRPQ
YDDQGKAVILVHDIKKHFYKKFLYEPFPVESSLLSVLAEHLNAEIVAGTITSKQDAMDYI
TWTYFFRRLVMNPSYYELEDADHDSINTFLSGLVEKALLDLESCYCIATAEDNRGVEPQT
LGRIASYYYLSHYTVKMFRDRMSATTTMKDLISLLADTKEYAELPVRHNEDALNSELAKH
LPLEVDPYSYDSSHTKAHLLLQAHFSRQQLPSTDYLTDTKSVLDQALRILQAMTDVTADE
GWLIPTLSIMQLIQMAVQGCWANDSSLLNLPHIQKQQLHCFRHSNGRPIQCLPELMAVCR
KGPHILRNMLQDSLTPQQIEQVWKVVQQLPLVDVTMSVVGWWEDNPDQQQTKPVTVTASR
RKTDSEWMKVHADQQYVLQVNLACLNKTGKRKAHAPRFPKAKDEGWWLVLGDMDRRELLA
MKRLGPIRQQKVPLAFYTPETVGRYLYVVYLMSDCYVGLDQQYDVALEVIPADIQTQVNS
EVVAE
NT seq
6498 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagcttccccgcctgactagcgccctgcgagccttttctggtgtctccagcggc
agcgaagccaacgggacgaacacgatatcactacaggagaagcgccagctgcagtcagcc
aggctgtccaagtctgaggtgaccttggacaccctgacagcagaactgttgaagagatgt
gtccgaggacaggagcatcagcttcaagcagatgtgaaggagctgtgccatgcagcctca
gccattgttggtgatatcggggtagagtacatccatgatgctgctgttgtccttttccgc
accctgtcaccagtcgacaaagttggcagggaagaaacttccaaactcagggcgatcttc
gggccgttccccgccagcgccgtgaacaaagccatgaaatcggtcaaggacatttgctcc
tgcctttccgaaggttccctaaactcactgacgtgcttctccagtcgccagtcgcaagaa
attaaagagtttggacaaggaattcatttctcccacgaaggtctgaagcttgtgacactt
tctgaaagacctggaactgagcctaagtccgcacacatgaacagggaagatttctctgct
gccaacgcaaacataaacggagcggcggagagtttatttaccgaagcgtggctttttgaa
aggttgcagcagatttttggcgagggctcggagttcggagcggggttacctccgggagag
ctatgcgatactttgattgacatcttgagcacaagccaaagcgactctgtgttacagaat
gagttgtttgaactcctgggttccggatgtttggacctgatccaagaccttctggaccac
aggagtgagctggtacagagtgctgcaagtcagaggcagagggaactcagaggttcagtt
gacgtttctggaattgcagggaagaaaacccctattgttgcacctacagtgacagtacag
tcagaaaaagagcgccagcttctcaagcagtatcggaaagatgagcgtcgtatggccaaa
aaagacgtcaccaatcaacaaggggcagcatcaaacagatttgacccccgtgacctaaga
gcacatagggaggcgctgcttcaagaggcaaccgccacgccattgttcagtgatccctat
gcagagctcaggccaatccgctaccccaatgtatacgactccttctccgaagctcgcaag
tcctcctcttttattggaggctgcaaaatgatcctgcctgcagggtttgagcgtaaggtg
agcaacatgtatgaggaagtgtccattccaccgagtgaccccccaccattgaccatcggc
aatgaccgcatcaacataagccaactggatgagattgcccagttagccttccagggtatg
aagaagctgaaccgtgtgcagtcggtggtgtgtgaaatggcgtacggaactaacgaaaac
ctgctcgtctgcgctccgacgggcgccggcaagaccaatgtggccatgcttactgtcctg
catgagctcatgcaacatgtccaacatggcgtcctgcagaaaaaggacttcaagatcatc
tacattgctccgatgaaagcgctggcagcggagatggtgtccacgttcgggtcccgtctc
caggcgctgggcgtggcggtacgcgagctgaccggagacatgcagctcaccaagagggag
atcgtggagacacagatgatcgtcaccacgcctgagaaatgggacgtggtgaccaggaaa
agtacaggtgacgtagccctggcgcaggctgtcagactgctgattattgatgaggtccac
atcctgaatgacgaccgaggacacgtcatcgagagcctcgtagcaaggacactacgtcag
gttgagacctcacaaagcatgatccgaattgttggcctgtctgcgaccgtgcccaactac
ttggatgtagcacgtttcctgaacgttaacccggagaaggggctgtttttcttcgacagt
cgtttccgccccgtccccctgcgacagacctacatcggtatcaagtccaccagtcgtatg
caacagctccaagacatggaacaggtgtgttacgacaaggtggaacatatggtcaggcag
agccaccaggtgcttgtgtttgtccatgcccgtaacgccactgtgaggacagctacagct
ctcagagacatggccaccagcagtgggaatgggagcatcttctgtagtcagcagagtcct
gagtatggagctgcggagaaacaggtaaaccgatcacggaacaagcagctacgggatctg
ttccctgatggctttgggatccaccacgcggggatgttacgccaggaccgtaacctgatg
gagcgactgttctcccgcgggttgatccgtgtgctggtctgtacagccacgctggcctgg
ggtgtcaacctaccggcacatgctgttgtcatcaaaggaacacaaatctacgatgccaag
cggggttcattcgtagacctgagcatcctggacgtgatgcagatcttcggtcgcgcgggt
cgtccgcagtacgatacgtttggcgaaggcgtgatcctgaccacccatgacaagctgagc
cactacctgtcactcatgactcaacagacacccatagagagccagtttatacagaacctc
accgacaacctcaatgctgaggtgtccctgggcacagtcaccaatgttgaggaggctgtc
aggtggctcagctacacgtacctgtatgtcaggatgaaggccaacccactggcttatggg
atatcctacactaatgcacagaaagatccagatttggaggagttccgtcgcgagctgatt
gttgcagccggtcgccagctggacaaggcgcgcatgatacggtttgaggagagaactggt
tacctccaccccaccgaccccggacgtacggccagccatttctacatcaaacacgacagt
gtgcaggtgtacaatgagtttctgaaacccttgatgacggagtcagacatcttagccatg
gtggccaagtcccatgagtttgatcaaatcaaggtacgagatgatgagatgtcagagttg
gatgagcttctggactccgtctgtccgttgcccgtgcccggcggggtggagaacagttac
gggaaagtcaacattctgctgcagacgtacatctgtcgtcatcgtgtggacagcttctca
ctcatgtccgacatggcgtatgtggtgcagaatgcagggcgtatcctgagagggctgttt
gagatcaccctgaggaaaggctggcccctgatggctggcaaactcctggagctcagtaag
gtggtggaccgccagctctggccgtttgaacaccctctgcaccagttctccatcctgtcc
aaggagatcctgcacaagctggaggcacgaagcctcagtgtgcacaggatcaaggacctg
caggctgacgagattgggagaatgattcatcatgtgaggatgggtaagatggtgaaacaa
gctgtgtaccagctaccttctctggaattggatgccgctatccaacccatcactcgcacg
gtgctacgggtgcgcctcaccatctcgccgaccttcacgtggaacgaccgtgtccacggg
acggtgtcggagccctggtggatctgggtggaggacccagagaaccaccacatctatcac
tccgagtacttcctcatacagaagaaacaggtgaagacagaggaagcacagacccttgtg
ttcaccatccccatcttcgagcccctccccagtcagtactacgtgcgggccatctcggat
cgctggctcggcgccgaggccatgtgtgccatctccttccaacacctcatcttacctgag
agacatcctccacatacagaactgctggacttgcagcccctcccagtcacagcactgagg
gatccatcgttggagagtctgtacaacttcacccacttcaaccccatccagacccagatc
ttccacaccatgtaccacactgacaccaacgccctgctgggggcgcccaccggatcaggc
aagactgtcgctgcagagctggccatcttcagaatcttccgagagtaccccaagactaag
gctgtgtatatagctccactgaaggccctggtcagagagcgtatagaagactggaagatc
cgttttgagaagaagctgggcaaaagagttgttgagttgactggagatgtgacgcctgac
atgaaggccatctcacagtcggacgtcatcgtgaccacgcccgagaagtgggacggagtc
agccgcagctggcagacacgcagctacgtcaaagctgtgacgcttcttatcatagacgag
atccacctgctaggtgaggatcgaggtccggtgttggaggtgatcgtgtcgcgtacaaac
ttcatctcctcacacacggacaggtccgtcagggtggtgggactgtccactgccctggcg
aacgccagggacctcgctgactggctcgggataaatcagcttggtatgttcaacttccgt
ccgtctgtccgtcctgtaccactggaggttcacatccatggttatcctggcaagcactac
tgtccccgcatggccaccatgaacaaaccaacattccaagctgtccgcacccactctccc
ctgaagccagccctggtgttcgtgtcgtcacggcgacagaccagactgacagctctggac
ctcatcgctttcctggctgtggaagacaaccccaaacagtggctgcacatgccggaaaat
gagatggaggcagtgataaaacatgtcaatgacaacaacctgaagttgaccctggcattt
ggcatcggtctgcaccatgctgggttacacgagagggacaggaagactgtggaggagctg
ttcgtccatcagaagattcaggtgttgatagccaccagcaccttggcctggggagtcaac
ttccctgcacatcttgtcgtggtcaagggtacggagtactacgacgggaagacctgtcgc
tatgtggacttccctatcactgatgtactacagatgatggggagggcaggcagaccacag
tatgatgatcagggcaaggctgtcatcctggtacacgatatcaagaagcacttctataag
aagttcctgtatgaaccctttcctgtggagtccagcctgttgtcggtactagctgaacat
ctgaacgcagagatcgtagcaggaaccatcacatccaagcaagacgccatggactacata
acgtggacttacttcttcaggaggctcgttatgaaccccagttactatgagttggaggat
gcagaccacgacagcatcaacaccttcctgtcaggactggtggagaaggcactgttagac
ctggagtcctgttattgtatcgcaactgcagaggacaaccgtggagttgagccccagacc
ctggggaggatcgcctcctactactacctgagtcactacactgtcaagatgttcagggac
aggatgtctgcaactactaccatgaaggatctcatctctctgcttgctgacaccaaggag
tatgcagagttgcctgttcgacacaatgaagatgcactcaacagtgaactagcgaagcac
cttcccctggaggttgacccgtacagttacgacagctcccacaccaaggcccacctcctt
ctacaggctcacttctcccgtcagcagctgcccagtactgactacctcaccgacaccaag
tctgtactggatcaggcactcaggatcttacaggccatgactgatgtgacagctgacgag
ggctggctcatccccaccctgtccatcatgcagctgatacagatggctgtacagggctgc
tgggctaacgactccagcctgctcaacctgccacacatacagaaacaacagctgcactgt
ttcagacacagcaatggccgccccatccagtgtctgcctgagctgatggcagtttgtagg
aagggacctcacatcctcaggaacatgctgcaagattctctcaccccccagcagatagaa
caggtgtggaaggttgtgcagcagctcccccttgtggatgttaccatgagtgtagtgggc
tggtgggaggacaacccagaccagcagcagactaagcctgtcaccgtcactgccagtcgg
aggaagactgattcggagtggatgaaggtccatgctgaccagcaatatgtactacaggtc
aacctggcatgcctcaacaagactggaaagaggaaggcccatgcaccccggttccctaag
gctaaagatgagggctggtggttggtgctgggggacatggacaggagagaactgctggcc
atgaagagactgggacccatcagacaacagaaagtacctctggccttctacacaccagag
actgtgggcaggtacctgtacgttgtctacctgatgagtgactgttatgtggggctggac
cagcaatatgatgttgctctggaggtcatcccggccgacattcaaactcaggtgaactca
gaggtggttgctgagtga
DBGET
integrated database retrieval system
