Branchiostoma floridae (Florida lancelet): 118418866
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Entry
118418866 CDS
T01074
Name
(RefSeq) THO complex subunit 2-like
KO
K12879
THO complex subunit 2
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03013
Nucleocytoplasmic transport
bfo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118418866
09122 Translation
03013 Nucleocytoplasmic transport
118418866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfo03019
]
118418866
03041 Spliceosome [BR:
bfo03041
]
118418866
Messenger RNA biogenesis [BR:
bfo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
118418866
Spliceosome [BR:
bfo03041
]
Complex C
Other components
EJC/TREX
118418866
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
118418866
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
118418866
NCBI-ProteinID:
XP_035680855
UniProt:
A0A9J7MVX8
LinkDB
All DBs
Position
7
Genome browser
AA seq
1570 aa
AA seq
DB search
MMAAVCLTAENLKNWEKSGKSDFVKLCRSLAHQDIDSLAGTSNTKDFRRALYELCLQVVK
GNVRHDSAVKVLMELGDVKRDLSSIMADILSLVDMDTICQEDKAQRERFISLVSACMPSV
VPEHVMKERLEVDSLEAVSLITQVKVFNVKYVKTKTKLFYKQQKFNLLREENEGYAKLVT
ELGQDVSGTNTSNTVLENIKSLIGCFNLDPNRVLDIILEAFECRPHLHDFYISLLKSYMT
EASTLCHVLGFKFQFYQDETGEKTPSSLYKVAALLLQYQLVELEALYAHLLPSDNDINER
HKREGLEARQQARKMSMVILSDKKDEEKEEDKDSKNDQGDNQKFGLCEALLRIGDWSHAQ
RIMDRLPHHVAVEQRSIAAALCALIHSTIEPLYRRVGVPKGAKGRPIPRLDNDQAPPQVH
QYSDLPQQVFIMLQHLGPHLACDTVLMAKVIRIGKAFMKEWSENPGKKQELSAVFYGLLT
ATDEVLLPTMSMLDANCCMSEELWSLIKTFPYEYRYRMYGQWKNQAYALHTQLIRIKAQT
MDKTKHIMKRLTKENIKPMGRLIGKLSHANPGVLFEIILSQIQRYENLINPVVDSLKYLT
TLSYDVLAYCIIEALANPEKERMKHDDTTISMWLQSLASFCGAIFRKYPIELTGLLQYVA
NQLKAGKSYDLLILKEVVQKMSGIEITDEITSDQLEALSGGELLRAEGAYFGQIRNTKKS
SQRLKDALLESELALPLSMLMAQQRNHVVFKEGAEMHLKLVGNLYDQCQDTLVQFGGFLA
TQLSTEDYTKSLPPLDVMVTTYHTPPDAAFFLSRPMYAYSINTRYDELKKADKGSKTSSS
QKTQRYIQAVTEVTSPVIESARAIHPPKVWDDISPQFYVTFWSLNMYDLSVPSGAYEKET
QKLKAQLSAIEDNRELAQSKKKKEKERCVALMEKLREEEKKQQDHCSRVLSRLKHEKDSW
FMSRSTKNETITQLLQLCIFPRCLYTANDAVYCAKFVHMIHNMKTENFSSLLLYDRVFSD
ISYMVASCTESEARCYGRFLSAMLETVMRWHSDKAIYEKECWGYPGFVTVLRASGAGSSS
KADQLDYENFRHVCHKWQFKLTRALVICLESQDYVQIRNTLIVLTKILQYYPMVQNLALA
LERRVDKIRQEEKEKRPDIYALAMGYTGLLKGKKGQLVPEHEFHLKEALKVSSKNGPVSI
SANSGGIMGSSGSSGKSEGSKDSGKSGAESSKGKQGKEEKSKDSSTDGMSNDKPSSGSSS
KSSSTSKSAMNGDVAMSSSKKSDSKQSSEKTKDKEKKEKSHNGEKSHKEGKGHHKEDKGH
KEDKGHKEGKGHKEDKGHKEDKGHEHRSHSKEREKSHRSPSVTSNGSGNGKPGKRSTEAS
PRNSDSEREHKRSRKEDHMSSASSATSAVAAKDAHRAEHKEASHKSPRYSSPAQPMTEKE
KKRASKEKEKMERDRSKERDGEKRRESKEHRKRKSEEPPSMTEFQESKRRKDEDKGKSGS
DSRRSSQEREKPRTPQTTPKLSSKLAKESGEKGKKESKDKDKEEKKSSKEKKVERKEEKK
HSSHKSEKKR
NT seq
4713 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggccgtctgtttgactgccgagaacctaaagaattgggaaaagagcggaaag
tcggactttgtgaagttatgtcgaagtctggcgcaccaagatatagacagtttggcggga
actagcaatactaaagacttcaggagagcgctgtacgagctgtgcctacaggtagtgaag
gggaacgtcagacatgacagtgctgtcaaggtgctgatggaactgggggatgttaagaga
gacctgtcgtcaatcatggccgatatcctgtctctcgtagatatggacaccatctgccaa
gaagacaaggcacagagagaacgcttcatatcactggtgtcagcctgcatgccaagtgtt
gtgcctgaacatgtgatgaaggagaggcttgaagtggattccctggaggcagtatccctc
attactcaagtcaaggtgttcaacgtcaaatacgtcaagacaaagaccaaacttttctac
aaacagcagaagttcaacttgctacgggaggagaatgagggatacgccaaacttgttact
gagctgggacaggacgtgtcaggcaccaacaccagcaatactgtcctagagaacatcaag
tctcttataggctgcttcaaccttgaccctaaccgtgtccttgacatcatcctggaagcg
tttgagtgccgtccccacctgcacgacttctacatctccctcctcaagtcctacatgacg
gaggcctccacactgtgccatgtgctgggcttcaagttccagttctaccaggatgaaact
ggagagaagacaccttcctcactgtacaaggtggcagcactcctcctgcagtaccagctg
gtggagttagaggcgctctacgcacatttgctcccctcagacaatgacatcaatgagaga
cacaagcgtgagggtctggaggcgcggcagcaggccaggaagatgtccatggtcatcctg
tcagacaagaaagatgaggagaaggaagaggacaaggacagcaagaatgaccagggagat
aaccagaagtttggcctgtgtgaggcactactgaggataggtgactggtcccacgcccag
cggatcatggacagactgccccaccatgtggctgtagaacaacgctccattgctgctgcc
ctctgtgccttgatccactccaccattgagccactgtacagaagggttggcgtgcccaaa
ggtgctaagggtcgccccatccccagactggacaatgaccaggcccccccacaggtgcac
cagtactcggacctgccgcagcaggtgttcatcatgctgcagcacctggggccacacctg
gcctgcgacaccgtcctcatggccaaggtcatcaggatcggcaaggccttcatgaaggaa
tggagtgagaacccaggtaagaagcaggagctgtctgcagtgttctacggcctgctgaca
gccacagacgaggtactgctgcccaccatgtccatgttagacgccaactgctgcatgtcc
gaggagctctggagcctcatcaaaacattcccctacgagtacagataccgtatgtatggc
cagtggaagaaccaggcctatgccctgcacacccagctcatcaggatcaaggcccagacc
atggacaagaccaaacacatcatgaaacgtctgaccaaagagaacatcaaacccatgggc
aggctcatcggcaagctcagccacgctaaccctggggtgctgtttgaaattatcctgtcc
cagatccaacgttacgagaacctgatcaaccctgtggtggactccctgaagtacctcacc
accctgtcgtacgacgtgctggcgtactgcatcatcgaggcgctggccaatccggagaaa
gagcggatgaagcacgacgacaccaccatctccatgtggctgcagagcctggccagtttc
tgtggcgccatcttcaggaagtaccccatcgagctgaccggcttgctgcaatatgtcgcc
aaccaactcaaggctggcaaaagctatgatctgctgatcctgaaggaggtggtacagaag
atgtcagggattgagatcacagatgagatcaccagtgatcaactggaggccctgtctgga
ggagagctccttagagcagagggtgcgtacttcggtcagatcaggaacactaagaagtcg
tcccagcggctgaaggatgccctgttggagagtgagctggccctccccctcagtatgctg
atggcccagcagaggaaccatgtggtgtttaaggagggggctgagatgcacctcaaactg
gtggggaacctgtacgaccagtgtcaggacacgctggtccagtttggaggtttcctggcc
acccagctgagtacagaagactacaccaagagtctaccccccctggacgtcatggtcacc
acctaccacacaccacctgatgctgctttcttcctctccaggcccatgtacgcttactcc
atcaatacaagatatgatgagctaaagaaggctgacaagggcagtaagacgtccagctcg
cagaagacacagcgctacatacaggcagtgacggaggtgacgtcacccgtcattgagtca
gcacgagccatccacccgcccaaggtgtgggacgacatcagcccgcagttttatgtcacc
ttctggtccctgaacatgtatgacctgagtgtgcccagtggagcctatgagaaggaaaca
cagaagctgaaggctcaactgtctgccatagaagacaacagggaactggcccagagtaag
aagaagaaagagaaggagcgttgtgtggcactgatggagaagttacgagaagaggagaag
aaacaacaggaccactgcagcagggtgctctccaggctcaaacacgagaaggactcatgg
ttcatgtctagatccacaaagaatgaaacgatcacccagctgctgcagctgtgtatcttc
ccgcgctgcctgtacacagctaacgatgcggtgtactgtgccaagtttgtgcacatgatc
cacaacatgaagactgagaacttctcctcactgctgctgtatgacagggtgttctcggac
atctcctacatggtggccagctgtacggagagcgaggcgcggtgttatggtcgcttcctg
tccgccatgctggaaacggtcatgaggtggcacagcgacaaagccatctacgagaaggag
tgttggggttaccctgggtttgtgacagtactgagagcatcaggagcaggcagcagcagc
aaggctgaccaactggactatgagaacttcagacacgtctgtcacaagtggcagttcaaa
ctcacaagggccctggtgatctgcctggagtcccaggactatgtacagatcaggaacaca
ctcattgtcctcaccaagatcctccagtattaccccatggtgcagaacctggcgctggct
ctggagcgccgcgtggacaaaatccgacaggaagagaaggagaagagaccagacatctac
gcgctggccatgggttacacaggtctgctgaaggggaagaagggccagctggtgcccgag
cacgagttccacctcaaggaggccctcaaggtgtcttccaagaatgggcccgtctccatt
tctgcaaactcgggcggaatcatgggttcctctggctcgtctgggaagtcggaagggtcc
aaagactcagggaaatctggtgctgagtcgtccaaggggaagcaaggcaaagaggagaag
tccaaggatagctccacagatggaatgtccaacgataagccatcttcaggaagctccagc
aaatcctcatctactagcaagagtgccatgaatggtgatgtagccatgtcatcaagcaag
aagtctgactcaaaacaatcttctgaaaagaccaaagacaaggaaaagaaagagaagtcc
cacaatggtgaaaagtcacacaaggagggcaagggtcatcacaaggaggacaaaggtcac
aaggaggacaagggtcacaaagagggcaaaggtcacaaggaggacaagggtcacaaggag
gacaaaggccatgaacatcgcagccacagcaaggagagggagaagagccacaggtcaccg
agcgtcacgtccaacgggagtgggaacggcaagccggggaagagatcgacggaagcatcg
ccaagaaattctgactctgagagggagcacaagcgtagtaggaaggaggatcatatgtca
tcagcctcgtcagcgacatctgcagtggcagctaaggatgctcatagggcagagcataag
gaggcatcccataagagccctcggtactccagtccagcgcagcccatgacggagaaggaa
aagaaacgtgccagcaaagaaaaggagaagatggaacgagatcggtccaaggaaagggat
ggggagaagcgcagagaatccaaagaacacagaaaaagaaaaagcgaggagcctccatca
atgacagagttccaggagtccaagagaagaaaagatgaagacaaaggaaagtctggcagt
gactccagaagaagcagtcaggagagggagaagcctcgcaccccgcagaccacacccaaa
ctcagcagcaagctggccaaggagtcaggagagaagggcaaaaaggagtccaaggacaaa
gataaggaggagaaaaagagcagcaaagagaagaaagtggaacgaaaagaagagaagaaa
cattcctctcacaagtccgagaagaagagataa
DBGET
integrated database retrieval system
