Branchiostoma floridae (Florida lancelet): 118418867
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Entry
118418867 CDS
T01074
Name
(RefSeq) transcription factor SPT20 homolog isoform X1
KO
K21245
transcription factor SPT20 homolog
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118418867
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bfo03036
]
118418867
Chromosome and associated proteins [BR:
bfo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
118418867
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
118418867
NCBI-ProteinID:
XP_035680856
UniProt:
A0A9J7MUX7
LinkDB
All DBs
Position
7:complement(5904782..6013627)
Genome browser
AA seq
996 aa
AA seq
DB search
MQMKAIEYFIDRAEYVLQAARQRPPKRRHPSGPSKWKSLNHKLNDLFVDESEKEPENKKL
RSSVHLLDKLVTKEKLTCLVVNLYPGNKGYSLMLKGKNGIDSETIKLPYEESDLLDYLDT
EELPPILVDLLERSQANVFYNGCVIAEVRDFRRTANSKTYESHHVLLRPTAQTLVCDVNA
ITNDGEHRWTQDDKHELEKQLVLATAEPLCLDPSPVVAVVSNRIQHHRLKFSTKPLKRCA
KRFSQTSANRRREMTTVPAPPHLFLHDFLQKRKEKRPHPPVDLKVGKACVDMWKQRSLSL
SAPSHVEVENYASVMERPKSTSDNTPITVEEVVLEAERSNNKILHSRVTIQQRPTDNFYQ
GELYVDRDHQPGDSKRENGTSCKFPLGSKVNAQRYIQQYKDLFTEEGRRSVKIAHIIPGQ
PPQITHTQTPNPNTPTQIVFPGGGQGLLAQTGSTISPGGATQYNRPLLKGSRSLGNKPKS
FSGGSSGGSKSKRPPPIKLSLSLNNTGSLSSNLMSPPGEQGDAGTPTSSGLGASHPSPTI
SMGAPMMTPTMAMSRSLGRQIPVYPLPGHSVVSPTDGVGTPPLASSGAGFPHGTMKTPKT
PPPLRPGSAPGAPSGQHSLPNILSRRQSVPEITQGGAQGQGSVSMTSSKVPTPSGTPTGT
PTGTPKPGDAPPTPSSVPTPTSENLPINIIGTMAQAGGIVPTITTTTSGGLVSMRIPMCV
TMVSGTPTAVVTTPSGVITTPINLSGAGPGIMTGAINIIGGTPIGGSITSSMQGTATSSQ
QVTAAPINITAAGMAAQGINPALAPQFLATGLKNAPQGLRPGTAPLSLLQVQGQQPQLIP
FNPQALQGRPLNQATLQQLQAQGQLPQGVQTQQIQLNAQQLQQIQQFQAQALQQSQSSPQ
QGAASDQPQQNQQIQQSLLQQFQQQQLQQALLLQQQGIQGQMQQLPQGQQQLAPLGYQKP
PSSLTVQQQLQQSIQQRQTSKSKSRKRTTPTPPKQS
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatgaaggccatagagtactttatagatagggcagagtatgttcttcaggcagcc
agacagagacctccgaaacggagacacccctctggtccctctaaatggaagtcattgaac
cacaagttgaatgacctctttgtagatgaaagtgaaaaggaaccagaaaataagaagtta
agaagcagcgttcatctcctagacaagctggtgaccaaggagaagctgacgtgcttggtg
gtgaacttgtaccctggcaacaagggctactctctgatgctgaaaggcaagaatggtata
gactcggaaacaatcaagctgccatatgaagagtcggacttgctggactatctggacaca
gaagagctacctcctatcctagtggacttgttagaaagatcccaggcaaatgtcttctat
aacggctgtgtgatagcagaagtgcgagacttcagaagaacagcgaacagtaaaacctat
gagagccaccacgtccttctcagaccaactgcacagactctggtgtgtgacgtaaatgca
atcactaatgatggcgagcacagatggacacaggacgacaagcatgagttagagaagcag
ctggtcctggccacggccgagccgctctgtctggacccgtctcccgtggtggccgtggtc
agcaacaggatccagcatcacaggctcaagttctcaactaaacctctcaagagatgtgcc
aaaagattcagccagacatcagcgaaccgtcggcgggagatgacgacggttccggcgccg
cctcatctgttcctccatgacttcctgcagaagaggaaggagaaaagaccacaccctcct
gtggatttaaaagtagggaaagcttgtgtggacatgtggaaacagcgatcactcagctta
agtgccccgtcccacgttgaggtggagaattatgcgtctgtcatggagagaccgaagtcg
acgagcgacaatactccgatcacagtagaagaagttgttctggaggcagagaggagtaac
aacaagatcctgcacagccgggtgaccatccagcaacgccccactgacaacttctaccag
ggtgagctgtatgtggacagggaccaccagccaggggacagcaagagggaaaacgggacc
tcctgcaagtttccgctggggagcaaagtcaacgcacagaggtatatccagcagtacaag
gacctgttcacagaagaggggcgacggtcggtgaagattgcccacatcatccctggccag
ccaccccagatcactcacacacagacccccaaccctaacacccccacgcagatagtcttt
cccggagggggacagggtttactggctcaaactggatctaccatttcccctggaggggcc
acacagtacaaccgccccttactgaaggggagcaggtccttagggaacaagcccaagagt
ttctctggaggctccagtggtggcagcaagtccaaacggcctccaccgatcaagctgtct
ctgtccctcaacaacacgggaagtctgtcctctaacctcatgagcccacctggggaacag
ggagatgcaggcactcctacatcttcaggactcggtgcatcacacccctcccccaccatc
tccatgggcgcccccatgatgacccccaccatggccatgtcacgctccctcggccggcag
atccctgtctaccccctgcccggccactccgttgtcagccctacagatggagtaggcacg
ccacctctggccagttcaggagcagggtttccccacgggaccatgaagacgcccaagacg
cccccacccctgcggcccggcagcgccccgggggcccccagcgggcagcactccctcccc
aacatcctcagcaggaggcagtcggtgcctgagatcacacagggcggggcacagggacaa
ggttctgtaagcatgactagttccaaggtccccacaccgagcggcaccccaacgggaacc
cccacagggacccccaagcccggggacgccccacccaccccctcttccgtccccacccca
acctcggagaacctgcctataaacatcatcggcaccatggcccaggcaggggggatagtg
ccgaccatcacgaccacgacatcaggaggccttgtgtccatgcggatccccatgtgtgta
accatggtgagcggcacgcccactgccgtggtaaccacgccttcaggagtcatcaccacg
cccatcaacctgagcggggcggggccaggcatcatgactggagccatcaacattattggt
gggacccctataggaggcagcatcacctcctccatgcagggcacagccaccagcagtcag
caggtcactgcagcacccatcaacattacagcagcaggtatggcagcacagggtatcaac
ccagccctggccccccagttcctggctacaggtctgaagaatgcgccgcaggggctccgg
ccggggactgctcctctctcactcttacaggtgcaaggccagcagccgcagctgatcccc
ttcaacccgcaggcgttgcagggccgccccctgaaccaggccaccctgcagcagctgcag
gcgcagggccagctgccgcagggcgtgcagacgcagcagatccagctgaacgcacagcaa
ctgcagcagatacagcagttccaggctcaggcccttcagcagtctcagtcctccccgcag
cagggcgcggcatcggaccagccgcagcagaaccagcagatccagcagagtttgctgcag
cagttccaacagcagcagctgcagcaggctctcctactgcaacagcagggcattcaaggt
cagatgcagcagttgccccagggtcagcagcagctggctcccctaggttaccagaagcct
ccgtcgtccctcacggtacagcagcaactgcagcagagcatccagcagaggcagacgtca
aagagcaagagtcgcaagcgcaccacaccaacaccgcccaaacagtcctag
DBGET
integrated database retrieval system
