Branchiostoma floridae (Florida lancelet): 118418979
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Entry
118418979 CDS
T01074
Name
(RefSeq) TBC1 domain family member 1-like isoform X1
KO
K17902
TBC1 domain family member 4
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bfo04131
]
118418979
Membrane trafficking [BR:
bfo04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
118418979
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
118418979
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
118418979
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
TBC1D_hel
PID
DUF3350
PTB
IPGAL2_N
PH_trem
Motif
Other DBs
NCBI-GeneID:
118418979
NCBI-ProteinID:
XP_035681033
UniProt:
A0A9J7LF39
LinkDB
All DBs
Position
7:complement(9227218..9274664)
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AA seq
1381 aa
AA seq
DB search
MNNPRKGKVGQLDLGTRDSGILFRILRGRKMDDKASIVNRKSADSGICSLIEGDGGSPSA
APDPDGMRSPTKQDPESGDSEPGTPSPLSPTSPIVPDHPNDKATKKGPFRLWYLGKCVLD
RRYTSPMLPWVVAELRRTSGPSRQEISLQLTKSTVRGSLQGEDNGLLFEHKLQQVARMAR
NLHYPNCFAYLTRESSDSPFAFHAFEAHDSEKVPEIFASIRLATKEYLKDNPHVDSRLDQ
YMDNKTSKFEVIYCGKVVVSHTKAPPTLIDDTIDKFKIHDAEKLKQQKKPADNGKRRLGS
TSRESEKAMTNLANNNSKVVCTEEECRTSQEDTRPNINSCETQDAGNSEKKRHRSNSGGN
VQNRTMLFQIGTLEVSLISLERKSVILEKNFKDISFVSQGIKQAEHFGFICRESSKSSRH
MCYVFRCQAESVVDEVMQCLKQAFNAAAESQRTHIVCETCPMHQYHKLALQIEGLYPPRA
KEVIQAHLQELGEADQTEISARIKSANPTGEQDENEITMAILRSLYEGRQKVHTHISDIS
QDGHRYPSKFDVIRNRAKKSLANSFESLLSRRTSAGAIFTAKGKGKQRHASEPMGNGQSA
RDRAATLDSGAAAAAAAKPSLEEVPETAPLPTSLPLHRKFPLFRSTSLHPARAAAVDSTT
RREKFFFTRSISMQQNPSTIPPPLRLVDDSPGPPTSAPPTPGKDQVEHKFDLEDSPFQLR
KRSNTLDHVPPRRNIMKEIRSSPLASRSSSKDSLSDSSTGSKQRLHASISSPPDTPQGYT
PHRRMSWRQAIFTRVVTPGRNNTMPGTLYVHELDETLTTPEASPKVRSVEKPRKRTREEL
RALWKKAIMEQILLIRMERENINLKGTILPRSTSFDTTRMDAVETKRTKLDYDVILPCSK
NTLVMWDGMLGTPNRAEVKFNPDELLAVVRAGVPKVRRGEIWRLLAEQYQLRNKHSNAPP
EIPYEELIRQLTSHQHAILIDLGRTFPSHAYFSTQLGAGQLALFNLLKAYSLLDREVGYC
QGLSFVAGILLMHMTEEEAFHMLTFSMYQLGFRRQYRPDMVALQIQMYQLSRLLHDNHRE
LYEHLEKNDIAPTLYAAPWFLTLFASQFPLGFVTRVFDLIFLQGTDVIFKVALTLLGDHE
DLIMACQGFENIVDFIKNQLPALGMVSMEKAISRAFELDISKQLHAYEVEYHVLQEEMIS
SPQRGDVDRMEKLEQANRNLKRQNMELLEKLQTSHSSIHSLEATVASLQSEQNKLRSSVQ
TLEIERAALLNTVTKLRRLLPNNCLIEEELNFSIVNEMRANVGLPPLSKNNSSSSSEDLD
TEVANITNKTRTIIPNQLRHRNMSGDSIGSSVSAGSTASSDLLCTENLQNTTTSTCRPLS
T
NT seq
4146 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacccccgcaaagggaaagtcggtcagctggatctgggtacgagggatagcggg
attctcttcaggatccttcgaggaagaaaaatggacgacaaggcgtccatcgtcaaccga
aaatcagccgacagcggcatctgctcgctgattgaaggggacggtggctctccttcggcg
gcccccgatcctgacggcatgcggagcccgaccaaacaggacccagaatcgggggactcc
gagccgggaacaccttcgcccctcagtccgacgagcccgatcgtcccagatcatcccaat
gataaggcgaccaagaaaggcccgtttcggctatggtacttggggaagtgtgttctcgac
cgtcgctacacgtcgccgatgttgccatgggtcgttgcggagctgagaagaaccagcgga
ccatcccgtcaagaaatctctctgcagctcaccaagtccaccgtccgcggctcgctccaa
ggggaagacaacggccttctcttcgaacacaaactccaacaagtcgccagaatggccagg
aatctgcactacccgaactgctttgcatacctgaccagagaatcttcagattcgcccttc
gcattccatgcgtttgaggcacacgactcagaaaaggtcccagagatctttgcttccatc
cgtttggcaaccaaggagtatctgaaggacaatccccatgtggacagtcgtctggaccag
tacatggacaacaagacctccaagttcgaggtcatatactgtggcaaggtcgtggtctcg
cacaccaaggccccgcccaccctcatagacgacaccatcgacaaattcaagattcacgac
gccgagaaactcaagcagcagaagaagccggccgacaatgggaagagaagacttggctcc
acctcgagagaatctgagaaagccatgaccaacttggccaacaacaactccaaggtagta
tgtacggaggaggagtgtagaacgagtcaggaggacacacgaccaaatatcaacagctgt
gagacgcaggatgctgggaacagcgagaaaaagagacatcgtagcaacagtggggggaat
gtgcagaataggaccatgttatttcagatcggaacgttggaagtgagtctgatcagtctg
gagcgtaagtcagtcatcctggagaagaacttcaaggacatttcgtttgtatctcaggga
atcaagcaagcagagcactttggcttcatctgccgagagtcaagcaagagcagccgccac
atgtgctacgtgttcaggtgccaggcagagtctgtggtcgatgaggtgatgcagtgtctg
aagcaggccttcaacgctgcagcggagagccagcggacccacatcgtgtgtgagacctgc
cccatgcaccagtaccacaagctggctctgcagatagaaggcttgtaccctccccgagcc
aaggaagtgatccaagctcatctccaggagctgggagaagctgaccagacagagatctct
gccaggatcaagagcgccaaccctacaggcgagcaggacgagaatgagatcaccatggcg
atcctgcggagtctgtacgagggacggcaaaaggtccacactcacatcagtgacatcagc
caagatgggcaccggtatccgtccaagtttgatgtcatcaggaaccgtgccaagaagtct
ctggcaaactcctttgagagcctcctgtcacggcgtacatcagcaggtgccatatttacg
gcaaagggcaaaggaaagcagcgccacgccagtgagccgatggggaatggacagtcggcc
agagaccgcgctgcaaccctggactctggagctgctgctgccgctgctgctaagccctct
ctggaagaggtaccagagactgcccccctccccacatcccttcccctgcacagaaagttt
ccactcttcagaagcacctctcttcacccggcccgggccgcggccgtagactctactacc
cggcgggagaagtttttcttcacccgtagcatttcaatgcaacagaacccaagtaccata
ccccctccattaagacttgtggatgacagccctggtccacccacatccgcaccccccacc
ccaggcaaggatcaggttgaacacaagtttgaccttgaagactcccctttccagctgaga
aaacgcagtaacacactcgaccacgtcccgcccaggcgaaacatcatgaaggagattaga
tcatcaccgctcgcttccaggtcttccagcaaagacagtctgtctgacagctctactgga
agtaaacaaagactgcacgcgagcatctcatcaccccctgacaccccccagggttacacc
ccccacagacggatgtcatggagacaggccatcttcaccagggtggtcacaccgggccgc
aataacaccatgccaggtaccttgtacgtacatgagctggacgagactctgaccacgccc
gaggccagccccaaggtgcggagtgtggagaagcccaggaagagaacacgagaggagctg
cgggctctgtggaagaaggccatcatggaacagatcctgctcatcagaatggagcgagaa
aatatcaatctgaaaggtacaattttgcctcgctcaacttcatttgacaccacccgtatg
gacgctgtggagaccaagcgaaccaagctggactacgacgtgatcctgccctgctccaag
aacaccctggtcatgtgggacggcatgctgggaacacccaacagggcagaggtcaagttc
aaccctgacgagctgctggctgtggtcagggctggcgtacccaaagtgagacgtggagaa
atctggagactccttgccgagcagtaccagctcaggaacaaacacagcaacgctccacct
gaaatcccttatgaggaactcatcagacaactcacgtcacaccagcatgctattctcatt
gatttaggccgcaccttcccgagccatgcctacttctccacccagctgggtgctggacag
ctggccctgttcaacctgctgaaggcctactcactgctggacagggaggttgggtactgt
caggggctcagcttcgtggcaggcatcctgctcatgcatatgacggaggaggaggccttc
cacatgctgaccttcagtatgtaccagctgggcttcagacggcagtacagacctgacatg
gtggcactacagatccagatgtaccagctgtcccgtctgctgcacgacaaccaccgcgag
ctgtacgaacacctggagaagaacgacatcgctcccacgctgtacgccgccccgtggttc
ctcacgctgttcgcctcacagtttcccctgggattcgtcaccagagtgtttgatctgata
ttccttcaaggaacagatgtgatcttcaaggtggcgctaacgttgctaggcgaccatgag
gacctgatcatggcatgtcaggggtttgagaacatcgtggactttatcaagaaccaactg
ccagccctggggatggtcagcatggagaaagccatcagcagggcgtttgagttggacatc
tcgaagcagctgcacgcctacgaggtggagtaccacgtcctgcaggaggagatgatcagc
tctccccagaggggggatgtcgacagaatggaaaagctggagcaggccaatcgcaacctg
aagagacagaacatggagttgttggaaaagctccagacatcacatagcagtattcacagt
ttggaagccacagttgccagtcttcagtctgagcagaacaagctgcgctcaagcgtccaa
accctggagatcgagcgggccgctctcctcaacaccgtcaccaagctgcgcaggctgctc
cccaacaactgcctcatcgaggaagagttgaacttctccatcgtgaacgagatgcgggcg
aacgtggggctacctcccctcagcaagaacaacagtagcagctcgtcggaagacttggat
acggaggtggccaacattacaaacaaaaccaggacaatcatccccaatcaactgaggcac
aggaacatgagcggggacagcattggtagctcagtcagcgcagggagcacagcttcttct
gatctgttgtgtacagagaatttacagaacacgacaacaagcacatgtagacctctctct
acctaa
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