Branchiostoma floridae (Florida lancelet): 118418980
Help
Entry
118418980 CDS
T01074
Name
(RefSeq) presenilin-2-like isoform X1
KO
K04505
presenilin 1 [EC:3.4.23.-]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04310
Wnt signaling pathway
bfo04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
118418980
04330 Notch signaling pathway
118418980
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bfo01002
]
118418980
Peptidases and inhibitors [BR:
bfo01002
]
Aspartic peptidases
Family A22: presenilin family
118418980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Presenilin
DUF3493
Motif
Other DBs
NCBI-GeneID:
118418980
NCBI-ProteinID:
XP_035681049
UniProt:
A0A9J7MWD5
LinkDB
All DBs
Position
1:complement(28001705..28015843)
Genome browser
AA seq
526 aa
AA seq
DB search
MSQYNSGSDSEHCNERTSLMEVQVDVRSGVGEAVTTQRVSRSSGRRSQQIQESTPGGAEG
REAGDGGEDHGIRHREDEEEEDTEMTLKYGAKHVIMLFAPVSLCMAVVVATISSITFYTE
KNGYLIYTPFHEEGASTASKVGDSLANAAIMVGVILVMTVFLVILYKYRCYKFIHGWLIL
SSLMLLFLFAYIYLGEVLQAYNIPCDYITLAIVMWNFGAVGMVCIHWKGPLLLQQAYLIV
ISALMALVFIKYLPDWTTWFILGAISLYDLVAVLCPKGPLKVLVETAQERNEPIFPALIY
SSTMMWFVGMADSDPEAKKKKKKKKKRRAEGDAQAAGGFRLLDNEAGSTGDDADAFDSAP
AGAVGGEEEGGFGPDWNESRGFQPTRRPNRGGNASDASVNSEDARQAAQNLSNGRLSPSG
NQQQQQQQMEEDEDEEERGVKLGLGDFIFYSVLVGKASSNGDWNTTLACFVAILIGLCLT
LLLLAIFKKALPALPISITFGLIFNFATANLVTPFTDALASQQVYV
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagtacaactccggctctgactcggaacactgcaacgagaggaccagcctgatg
gaggtacaggtggacgtgcgatccggggtgggggaggccgtcaccacacagagggtgtcc
aggagcagtggccgccgaagtcagcaaatccaggaaagcacaccaggtggggcagaggga
agagaggcaggggatggaggagaggatcatgggatcagacacagggaggatgaggaggag
gaggacacagagatgaccctgaagtacggagccaaacatgtcatcatgctgttcgctccc
gtctccctctgcatggctgttgtcgtggcgaccatcagttccattactttctacacggaa
aagaatggctacctaatctacacacctttccacgaggaaggcgcgtccacagccagcaaa
gttggcgactccctggccaacgctgccatcatggttggggtcatcctagtcatgactgtc
ttcctggtcatcctgtacaagtacaggtgttacaagtttatccatggctggctgatcctg
tcctcactgatgttgctgttcctgtttgcatacatatatctgggtgaggtcctccaggcc
tacaacatcccctgtgactacatcaccctggccatcgtgatgtggaacttcggagcggtg
gggatggtgtgtatccactggaaaggccccctgctgctgcagcaggcttacctcatcgtc
atctccgctctcatggcgctggtcttcatcaagtacctgcctgactggactacctggttc
attctgggggccatctcactatatgaccttgttgcagtgctgtgccccaaaggtcccctg
aaggttctggtggagacagcccaggagaggaacgagcccatctttcccgcgctcatctac
tcctctacaatgatgtggttcgtgggcatggcggattccgacccagaggccaagaagaag
aagaaaaagaagaagaagaggcgtgccgagggcgacgcccaggccgcaggtggttttaga
ctcctcgataatgaagctgggagcacaggggacgatgctgacgcttttgactcagcccca
gcaggtgctgtaggtggtgaggaggagggagggttcggaccagactggaacgagtcccgc
ggattccagcccactcgccgaccgaacaggggcgggaacgcgtccgatgcctccgtaaac
agcgaggacgcacggcaagctgcgcagaatctgtctaacgggagattgtcacctagtggg
aatcaacaacaacaacaacaacagatggaagaagacgaagatgaggaagaaaggggtgta
aagctgggactgggagacttcatcttctacagtgttcttgttgggaaggcttcatccaac
ggggactggaacacaaccctagcctgctttgtggccattcttatcggcctgtgtctgacc
ctgctgttgttagcgatcttcaagaaggcgctgcctgctctccccatctccatcacgttt
ggactcatcttcaactttgccacagccaacctggtcacacccttcacagatgcgctggcc
agtcagcaagtctatgtgtag
DBGET
integrated database retrieval system
