Branchiostoma floridae (Florida lancelet): 118419271
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Entry
118419271 CDS
T01074
Name
(RefSeq) malignant fibrous histiocytoma-amplified sequence 1 homolog isoform X1
KO
K19613
leucine-rich repeat protein SHOC2
Organism
bfo
Branchiostoma floridae (Florida lancelet)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_1
LRR_9
LRR_LRWD1
LRR_6
Motif
Other DBs
NCBI-GeneID:
118419271
NCBI-ProteinID:
XP_035681511
UniProt:
A0A9J7MWM6
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Position
7:complement(4786163..4795830)
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AA seq
488 aa
AA seq
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MGNKDSRPVSVPVHRQRARTPPQSQGVRQGTPARNSPGKSRTPPPKPPRAPRPENSTSNQ
HHSRSLPLPKRRGRHHSSGNNKNQKNGHLPNGAGRFGHTGNLTRSMSTFEVSGAMTLPRT
VSDTALLGTPPTADMGTILRTEMTMSFLSRGRRELELGGRAMRILPDALLSLWDLQVLDI
SKNKLRQLPSKFRRLRSLESLTMSTNEFKTFPEQITDLVNLISLDMGYNELRTVPKGISR
LARLVNLILNNNNFAELPEEVLYLITLENLNLSYNVLDEIPAKIYRLRRLRGLELNNNNL
TRFPPGVLELFNLEVLNLSFNKIGVVPEDISRLSNLSRLGLANAGLTQLPSGICLLTLMI
ELDLSDNRLSELPAEFSRLKLLRKLELQWNVVEEFPEQLLQLRGLEVLSLHNNRLKFLPP
GIVGLQRLKKLWISSNRLTTVPSGVCELPELASLHLYDNQLISFPPGFENVSNLPDLQIY
PQRSIIFG
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggggaataaggactcaagacccgtgtcggtccccgtacaccggcagagggcccgtaca
ccgcctcagagtcagggcgtacgccagggcacgcccgcgagaaacagcccggggaagagt
cggactccgccgccgaaaccgcccagggctccccgcccggagaacagcacctcgaaccag
caccacagccgctcgctaccgcttcccaagagaaggggaagacaccacagcagcggtaac
aacaagaaccagaaaaacgggcaccttcccaacggagccggccgcttcggacacacggga
aacctgactcgttccatgtcaactttcgaggtaagcggggccatgactctgccgaggacc
gtgagcgacaccgccctgctaggcacgcctcccaccgccgacatgggcaccatcctccgc
accgagatgaccatgtccttcctcagcagagggaggagggagctggagctcggcgggagg
gccatgcggatcctcccggacgctttgctctccctctgggacctccaagtcctcgacatc
agcaagaacaagctccgacaactccccagcaaattccggcgactccgcagcttagagagc
ctgaccatgagcaccaacgaatttaaaacatttcctgaacagattacggatctggttaat
ctgataagccttgacatgggctacaacgagctcagaactgttcccaaaggaatttccaga
ttagctcggctcgtgaacttgatcttgaacaacaacaacttcgcggaacttccggaggag
gtgttgtatctgattacgctggagaacctgaacctgagctacaacgtgctggacgagata
ccggcgaagatttacaggctgaggcggcttcgcggattggagctgaacaacaacaacctg
acacgcttccccccgggagtcctggaactgtttaatctggaggtgttgaacctgagtttc
aacaagatcggagtggtgccagaggacatatcccgactcagcaacctgagcagactgggg
ctagccaacgccggcctcacccagctgcccagcggcatctgcctgttgacgctcatgatc
gagcttgacctctcggacaaccgtctgtcggaacttcccgccgaattttcccgcctaaaa
cttctgaggaaactggagttacagtggaacgtcgtggaagagttcccggaacagctctta
cagttgagagggctggaagtcctctcgttgcacaacaatcgtctgaaatttctcccgccg
ggaatcgtggggctgcagcggttgaagaagctgtggatcagcagtaaccgtctgacgaca
gttccctcaggagtgtgcgagctgcccgagctcgccagcctacatctctatgacaaccag
ctcatctcgttcccacctgggttcgagaacgtctccaatctgcccgacctgcagatctat
ccacagagaagcatcatatttggatag
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