Branchiostoma floridae (Florida lancelet): 118419296
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Entry
118419296 CDS
T01074
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM-like isoform X1
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bfo04121
]
118419296
Enzymes [BR:
bfo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118419296
Ubiquitin system [BR:
bfo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118419296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
zf-RING_16
zf-RING_UBOX
zf-RING-like
zf-RING_4
zf-RING_Vps41
EHMT1-2_CRR
Motif
Other DBs
NCBI-GeneID:
118419296
NCBI-ProteinID:
XP_035681538
UniProt:
A0A9J7LET0
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All DBs
Position
7:15256340..15262614
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AA seq
560 aa
AA seq
DB search
MAPRRTRSTNTSSGVRGHPYRSGGARTSAARVRGQSNRSQVSRTTTASADQGRGQTRTRA
QRSVESNHSSEPRGQRSGARVHSADPRGQRSGRNAISRDSASPTTGENTAFPAAQSSVHA
QSGNDANSSARRSSRVRADAATYDRRRGSGNPPAATRRSSRLQGTDSMSSSLFQSNQPVT
YDATRSHSPGTNDRVLRSSGTVDSNIPTGGPPPQVAQQGDNIGNQEQGNQQNGNVPTPTP
LLSTGRFSAYYVGRANHFYSDLLSLTPQPTRDRGNSGYNLRRRWATQSSTDRGGTNQRRG
APPRPVERAPEPPVSSQPPSRLREGPVTRSQARLRQSSQGTVWRQGRFRIRHPGPVEPGH
EEDSMQHAMDMLTDLSSPNNTRDEDTMSESSNGSDRSGIPGEALPENFLGFGPEFWQGRR
LVSIRFVRDHSILDYFPATGNMYISSLDEPPRGLSPQEIESIPYRNFARNEEAKTCSICI
VNYRTGNRVKTLPCSHEFHEACIKRWLREHENCPTCRQPVREADSTAAEEAGAAAEAGAP
PENDPAPSGEPPNGNGAMNT
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggcaccaagaaggactagatcaaccaacacaagttcaggggtcagaggtcatccctat
aggtcaggtggtgcaagaacctcagctgcaagggtcaggggtcagtccaacaggtcacag
gtgagcaggactaccacagcatctgctgaccagggtagaggtcaaactaggaccagagcc
cagaggtcagtagaaagcaatcacagctctgagccaagaggtcagaggtcaggagccaga
gtgcacagtgctgacccaagaggtcaaaggtctggcaggaatgcaataagcagggactct
gcttccccaaccacaggagagaatacagcttttcctgctgctcaaagtagtgtccatgca
caatccggtaatgatgccaatagcagtgcaagaagaagtagtagagttagagctgatgca
gccacatatgataggaggagaggcagcgggaacccaccagctgccacccgtaggtctagc
aggctgcaggggacagacagtatgtcaagctcactattccagtctaaccaacctgtaact
tatgatgccacaaggagtcactctcctgggaccaatgacagagtccttcgctcctcggga
actgtagacagcaacattccaacaggaggaccacctccccaagttgcacagcaaggtgac
aacattggcaaccaagagcaaggcaaccagcagaacgggaacgttccaacccccacccct
ctgctcagtacaggaaggttcagcgcgtactacgtggggagggccaatcacttctattcg
gacctgctcagcctgacgccacagcccacgcgagaccgtgggaacagtgggtacaacctt
cgcaggaggtgggccacacagagctctacagacagaggtggaacaaatcagcgaagaggt
gcgcccccacggcctgtggagcgtgcaccagagccccctgtcagctcacagccgcctagc
aggctacgggaggggcctgtcacccggagccaggcccgtctgcgacagtcgtcacagggg
accgtgtggcggcagggacggttccggatacgccaccccgggccggtcgaacccgggcac
gaagaggacagcatgcagcacgctatggacatgctgacggatctgtcctcgccaaacaac
acacgtgacgaagacaccatgtccgagtcgagcaacggctccgaccgcagcgggatcccg
ggggaagccctgccagaaaacttccttgggttcggaccggagttctggcaagggcgccga
ttggtcagcatccgttttgtccgcgaccacagcatcctggactacttccccgccacgggg
aacatgtacatctcttcgctggatgagccgccacgcgggctctccccgcaggagatcgag
tccatcccgtatcggaatttcgcacggaacgaggaggccaaaacctgcagcatctgtatc
gtgaactaccggacgggaaaccgcgtgaagactctgccgtgttcccacgagttccatgag
gcctgcatcaagcgctggctgagggaacacgagaactgtcccacctgcaggcagccggtt
agggaggcagatagcacagctgctgaagaggcaggtgctgcagctgaggcaggtgctcct
ccagaaaatgaccctgcaccgtcaggggagcctcccaatggtaatggagctatgaacacc
tga
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