Branchiostoma floridae (Florida lancelet): 118419377
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Entry
118419377 CDS
T01074
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM56-like
KO
K12026
tripartite motif-containing protein 56 [EC:
2.3.2.27
]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bfo04121
]
118419377
Enzymes [BR:
bfo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118419377
Ubiquitin system [BR:
bfo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118419377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_5
zf-ANAPC11
Prok-RING_4
BAH
Apolipoprotein
HTH_54
Motif
Other DBs
NCBI-GeneID:
118419377
NCBI-ProteinID:
XP_035681634
UniProt:
A0A9J7MWY8
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All DBs
Position
7:5893507..5894712
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AA seq
397 aa
AA seq
DB search
MATASFSEKVSDDFIQCTICCYNFKKPKVLPCLHTFCAHCLREWAQKNDGDTFPCPICRE
QVSLPENGVEGLKDNFFLASLVKAVTEHHKVRHGQDGLLCTTCDEGKPATSRCSDCAEFL
CESCELAHRLQRATKGHTLFTFEELKTGKYDGVFRTRKVPPCPKHSGEILKLYCRTCETP
ICNECALFEHRDLQLLHNITRIEEVATEKRKTILDLTPQCQAQVQFFQRTEEVQNRLKEQ
LQKNTELARQNVHQTVQTMVALVKEEGERLLACIDTEETSRKKQIEAEIEGAQIGLASAK
STCEFAETLAREGGDYEVASFSQDMATRLIDLTKPPIGTVDLGLVNIPVDYSVMGRKFEQ
NIPPPGQYVMLESTERELRSLLKGASPSQTSKHGKYK
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgcttctttctcggagaaagtcagcgacgacttcatccagtgtacgatctgt
tgctacaacttcaagaagccgaaggttcttccttgcttgcacaccttttgtgcgcactgt
ctgcgagaatgggcccagaagaacgacggagacacctttccgtgtcctatttgtcgtgag
caagtttcattgcccgaaaatggcgtcgagggtctaaaggacaactttttcctcgctagc
ctggtgaaagccgtgacggagcaccacaaggttcgccacgggcaggatggcctcctctgt
accacttgtgacgaagggaagccagccacgtccaggtgttcagactgtgctgagtttctg
tgtgagagttgtgagttggcacatcgtcttcagagagctaccaagggccacaccctcttc
acgtttgaggaactgaagacgggcaaatatgacggtgtcttcaggacaaggaaagttccg
ccgtgccccaaacactccggagaaatcctgaagctctactgtaggacatgcgagactccg
atatgcaacgaatgtgccttgttcgaacacagggacttacaactattacacaacataacg
cgcattgaagaggtggccactgagaaaagaaagacaatcttagatctcacaccacaatgc
caggcccaagtgcaattcttccaacggacagaagaagttcagaaccgcttgaaggaacaa
cttcagaaaaatacagagttggctcgtcagaacgtccaccaaactgtacaaacaatggtt
gccctggtaaaggaagaaggagaacgacttctagcttgcatcgatacagaagaaacatcc
aggaagaaacagatcgaagcagagatagagggagcgcagatcggtctggcgagcgccaaa
agcacctgtgagtttgcagaaactctagctcgggagggaggcgactacgaagtagcgtct
ttctcacaggacatggcaacgagactgattgacttgacgaaaccacctatcggcacggtg
gacttgggactggtaaacattcctgttgattactcggttatggggcgcaagtttgaacaa
aacatcccgccacctggccaatacgtaatgctagaatcaacagagagagaactacgttct
ttgctgaaaggagcatccccaagtcagacgagcaaacatggtaagtacaagtag
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