Branchiostoma floridae (Florida lancelet): 118419408
Help
Entry
118419408 CDS
T01074
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118419408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfo03019
]
118419408
03036 Chromosome and associated proteins [BR:
bfo03036
]
118419408
Messenger RNA biogenesis [BR:
bfo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118419408
Chromosome and associated proteins [BR:
bfo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
118419408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
118419408
NCBI-ProteinID:
XP_035681669
UniProt:
A0A9J7LF40
LinkDB
All DBs
Position
7:7785571..7813400
Genome browser
AA seq
1855 aa
AA seq
DB search
MFGQQKTPFGGTTGFGTTTKPFGAAKTAGTGAFGTSSFGATQTPATGGLFGGTATNTGTG
LFGGTSFGTPSTSTSTFGGFGTSTTQTGGGLFGTSTSTAGTGLFATPQQQTAPFGAANKT
GFGGFGTQTSTAATGTGLFGATQQTPSLFGGGQTTSTGLFGAVGGIAAGTNGTTVKFNPV
SGSDTMMKNGVSQNIRTAHQCITAMKEYETKSLEELRVEDYLANRKGGSTGTTAMFGGTA
TPQTGGGLFGNTATTTSTTGFTFGKAAFGTGQTQAKGATGFGTTSTGTGLFGQTQTTQAG
GLFASPFGGTATTTTASTGFSFGQTNTGTGLFGQTQQKTGLFGQPTTQTTGLFGTPSTTT
TTGFGTTFGTGTFGTQNQAGGLFGANKAPTFGATTTTSTAGGLFGNTATNTGGLFGQNKP
GLTLGLGTGFGTGAFGTTTTSTGTSLFGPKPTNTFGAGLGTGLGAGLGTLGTGSIFGNTG
LGAGIGTGTTGLNLTQPAAALGTDAAAQLAQQAQIQQQLQALSNSPFGDSPLFRNNVADP
AKRAELLKPTSLAAQKALTTPSHYKISPRPTAKIKPKPLHSLVAGKSQLFEGLDDEDTSL
SNDTFVPRRSVKKLIIKNKASPTASELDAGLGEEDDLLAPPAYPSDTFLVEDKRTSESEK
ENDPMENLYSNPVRKPIPETPANKSSPAPDDSIIALNLRQRSCSPGQDSMGEPTNDDQGE
VEDEVEREPHPAGIILTKNEYYTEPSLDELANMVDENGDCWVENFVIGREGYGSVFFPGL
TNVANLNLDETVHIRRKEITVYPDDSTKPPEGDGLNKKAEVTLHCTWPMDKTAHIPIKSP
DRLKKMGYQEKIEVATSKIGARFLEYRPDTGSWVFQVPHFSKYGLDDSEDEEELVGQEQK
KMKMQQQADLQKQQQQKENQPPSLNKQQPITERVKSEQPIMEQMQDDSDMADISQEPIPD
LAPNSSGDQDGLEGLSEEEVVPSSHRLATHLGMSAHRMQVMKASFFGDEEEGEGMDYKPV
FGGMSGRSSLRGSAPPSGSASPLPHRMAEAKMDRGSFLAHTARLGSLASPVRGLGGMSPS
HSPRTRIPSGGFSPKYSPKVEQSGLFPSLSKPAQYPVFERNQGLLLPSGLSSEIERPRKI
VGSQRQPMLLPWKQTVTNEKQSLVADAALMMGRSFKVGWGPNWTLVRCAGADREEAPERK
KETSIPFSILPKSTPRLAKLGTSSPFSVVMERVDVAPHFVVQDKVTVANHVSHLEVELET
SLCSTEDHPCPVFVPTPGVNALHQHADVACRNRENTGVRHPERESADHASLVLSLCVALW
GDLPDQDREDGEDGLDMTSYAYHMARREAVSHWLMNQAQDTIEQEVQDSKFKEGGHTDAI
FSLLSGRQISQACSLAQQSGDHRLALLLAQASGSHFPRELVGKQLSDWEELKADRFISDS
RLRVYALLAGKPVWPTTNGEINTCENLDWKRALAVHLWYLCTPSATVSEALQLYCKAFTK
NNSDYGEYANPPLPPYLERSADRSGDQEDRYVIRDMCYHLLQLYADRSHQLDRLLAPTTS
TPNQLDYRLSWLVCQALQALDYTHLSEHHLNTIHAGYIAQLESLGLWEWAVFVALHITDN
SRRELVTKELLCRHCSLSEEEAYVQKEEFLQEKLRVPVVWIHEAKALRAQYEGKSHDEAW
HLLKAGKWNASHRIVLKHLAADAIINEDYEYLKEFLEELSPPDRSSTIQDWNFGGRVFLD
YILINNALVEMAKGNSSSYDLERLHPQVTSLCSRIENIPCLTPKDRLCQSEMAKKAASFL
RLVLEGQNKPPTVDGEYLVPSYQLAPHITKLPMPEDYALQELRALTHSYMMELTT
NT seq
5568 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtcagcagaagactccctttgggggaaccactggtttcggcacaactacaaaa
ccttttggtgctgctaaaactgcaggcacaggtgcttttggcaccagtagcttcggggcc
acccagacccctgccaccggagggctgtttggcggcacagcgacgaacaccgggacgggg
ctcttcggaggcaccagcttcggcacaccgtccacgtcaacgtccacctttggagggttt
ggcacgagcaccacgcagacgggaggggggctgtttggtacctccacaagtacagcaggg
acaggactgttcgcgacgccacagcagcagacggcaccgtttggggctgcgaacaagaca
ggatttggagggtttggaacccagacgtccacagctgccacaggtacagggttgtttgga
gccacccagcagacaccaagtctatttggagggggacagaccaccagtacagggctgttt
ggtgcagttggaggcattgcagctggaacaaatgggacaactgtgaagttcaatcctgtg
tctggtagtgacaccatgatgaagaatggagtctcccagaacattcgtacagctcaccag
tgtatcaccgccatgaaggagtacgagaccaagagcttggaggaactccgtgttgaggac
tacctggccaatcgtaagggcggctcgactgggacaactgcgatgtttggagggacagcg
actccacagacgggaggcggcctgttcggcaacaccgccaccaccaccagtaccactggc
tttacctttggcaaagctgccttcggtacaggtcagactcaagctaaaggtgctacaggg
tttggtaccacctcaacaggcactggcctctttggacagacccagacaacccaggctggg
ggcctttttgccagcccttttggaggcactgccaccactacaacggccagcacaggcttc
agctttgggcagaccaacaccgggactgggctgtttgggcagactcagcagaagactggg
ctttttggtcagcccaccacccagaccaccggactgtttggtacacccagcacaaccact
acaactggctttggcaccacattcggcacaggaacattcggcacacagaaccaggctggt
ggcttatttggagctaacaaggctcctacctttggagcaaccacaacaacaagtacagca
ggagggctcttcggtaacactgctaccaacactggtgggctctttggtcaaaacaaacct
ggcctgactttaggtctgggaacaggatttggtactggagcctttggcactaccaccact
tccacaggcacctccctgtttggcccgaagcccaccaacacgtttggggctggccttggt
actggcctgggtgccgggctagggaccctggggacaggttcaatctttggaaatactggt
ttgggtgctggaattggcactggaacgactggactaaacctcacacaaccagcagctgca
ctgggtactgatgctgcagcacagcttgcccagcaggcccagatccagcagcagctgcag
gctctgtccaactcaccctttggggattcacctctcttcagaaacaatgttgctgaccca
gccaagcgagccgagctgctgaagcccaccagtctggctgcacagaaggccctgaccacg
ccctcgcactacaagatctctccacgtccaacggccaagatcaagcccaaaccgctacat
tcactggtggcaggaaagtctcaactgtttgaaggccttgatgacgaggacacgtccctc
agcaacgacacatttgtgcccagaaggagtgtgaagaaactcatcatcaagaacaaggca
tctcctactgcaagtgaacttgatgcagggcttggagaggaggatgacttactcgcccct
cctgcctacccttctgacacattcctagtggaggacaaaagaacaagtgagagtgagaag
gagaatgaccctatggagaacctttactccaaccctgtcaggaaacccatccctgaaaca
cctgcaaacaagtcctcccctgctcccgatgacagcatcatagctctgaacctgcgacag
aggagctgcagtcccggccaggacagcatgggggagccgacaaacgatgaccagggggag
gtcgaggatgaggtggagagagaaccacaccctgctggcattatcctgaccaagaatgag
tactacaccgagccgtccttggatgagctggccaacatggtggatgagaatggggactgc
tgggtggagaactttgtcatcgggagagaaggctacggctccgtcttcttccctgggctc
accaacgtcgccaacctcaacctggatgaaactgtgcacatcagaaggaaggagatcacc
gtgtacccagatgactccactaagcccccagagggagacggcctgaacaagaaggcagag
gtcaccctgcactgtacctggcccatggacaagacagctcacattcccatcaagagtccg
gatcgcctgaagaagatgggttaccaggagaagatcgaggtggccacatctaagattgga
gcaaggttcctggagtacagacctgacacagggtcctgggttttccaggtgcctcacttc
tccaagtacggcctggatgacagtgaagacgaggaagagctggttggtcaggaacagaag
aaaatgaagatgcagcaacaagcagatcttcagaaacagcagcagcagaaagagaatcag
cctcccagtttgaataagcagcaaccaatcacagagagggtgaagtctgagcagccaatc
atggagcagatgcaggatgacagtgacatggctgacatcagccaggagccaatccctgac
ctggcacctaacagctctggtgaccaggacggtctggagggcctgtctgaggaggaagtt
gtgccgtcctcccaccgcctggccacccacctggggatgagcgctcaccgcatgcaggtc
atgaaggcttccttcttcggggatgaggaggaaggggagggcatggattacaaaccagtg
tttggaggcatgagtgggagaagttccctccgtggatcagcccctccatctgggtctgcc
tccccccttcctcacaggatggcagaggccaaaatggacagagggtccttccttgcacac
acagccagactcgggtccttagcaagcccagtacgcggtctcggtggaatgtccccctca
cacagccccagaactcgtattccaagcggaggattctcccccaaatactccccaaaggtg
gaacagtccgggctcttcccctcattgtccaaacctgcgcagtatcccgtgttcgaacgg
aaccagggactcctccttccgagcggactttcctcggaaatagagcgacctcgaaagatc
gttgggagccagcgtcagccgatgctgctgccgtggaagcagacggtgaccaatgagaag
cagagcttggtcgcagacgctgcgctcatgatgggccggtcgttcaaagttgggtgggga
ccgaactggacacttgtgagatgtgcaggggctgacagagaagaggcaccagaaagaaaa
aaggagaccagcatccccttctccatcctacccaagtccaccccccgtctggccaaactt
ggtacgtcctcacccttcagtgttgtcatggagagggtggacgtggcacctcactttgtg
gtgcaggacaaggtcacagtggcgaaccacgtgtctcacctggaagttgagctggagacc
agcctgtgctcgacagaagaccacccctgcccagtgttcgtccccaccccgggggtcaac
gccctgcaccagcacgccgatgtggcgtgcaggaacagggagaacaccggtgtgagacac
cctgagagggagtcagctgaccatgctagcctggtgctgagtctgtgtgtggctctgtgg
ggagacctgccagaccaggacagggaagatggggaggatggccttgacatgaccagctat
gcataccacatggccagaagagaggcagtctcccattggctgatgaaccaggctcaggac
accatagaacaggaagtacaagactcaaaattcaaggagggtgggcacacagatgccatc
ttcagtcttctgagtgggcgccagatcagccaggcttgctcattggctcaacagtcaggt
gaccacagactagccctgctattggcacaggccagtggtagccattttcccagggaactt
gtagggaagcagctcagtgattgggaagaactaaaggctgacagattcatcagtgactcc
agactgagagtgtatgccctgctagcggggaagcctgtgtggccgaccacaaatggtgaa
atcaacacctgtgaaaacctggactggaaacgagccctggctgtacacttgtggtacttg
tgcacaccttcagccactgtatctgaagctcttcaactgtactgtaaggcctttacgaag
aataactctgactatggggagtacgcgaaccctccccttcccccatacctggagcggagt
gcggacagatcaggtgaccaggaggaccggtacgtgatcagggacatgtgttaccacctg
ctgcagctgtacgctgaccggtcccaccagctggacagactgctggctcccacgacgtcc
acacctaaccaactggactacagactgagctggctggtgtgccaggcgctgcaggcgctg
gattatacgcacctgtctgaacaccacctgaacaccatccacgccggctacatcgcccag
ctggagtcactgggcctgtgggagtgggccgtgtttgtggcactgcacataactgataac
agcaggagagaacttgtaactaaagagctgctgtgcagacactgtagtctgtcagaagag
gaggcatatgtacagaaagaagagtttctgcaggagaaactaagagtgccagttgtatgg
atacatgaagcaaaggctctgagggcgcagtatgaaggcaagtcccacgatgaggcctgg
cacctgctgaaggctgggaagtggaacgccagtcacaggatcgtactgaaacacctggct
gcagatgctatcatcaatgaagattacgagtatctgaaggagttcctagaggagctgtct
ccccctgacaggtcctctaccatccaggactggaactttggagggagggtgttcctcgac
tacattctcatcaataatgctttggtagaaatggcaaaggggaattccagcagctatgac
ctggagaggctccatccacaggtgacatccctgtgcagtaggattgagaacatcccctgc
ctcacacctaaagacagattatgccagtctgaaatggccaagaaagcagccagcttcctt
agactagtgttggaaggacagaacaaacctcccacagtggacggagaatacctggtgcca
tcctaccagttagccccacacatcaccaaactacccatgccagaggactatgccttacag
gagctcagagcactcacacacagctacatgatggaactaactacatag
DBGET
integrated database retrieval system
