Branchiostoma floridae (Florida lancelet): 118419642
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Entry
118419642 CDS
T01074
Name
(RefSeq) TBC1 domain family member 9B-like
KO
K19951
TBC1 domain family member 8/9
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bfo04131
]
118419642
Membrane trafficking [BR:
bfo04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
118419642
Endosome - Golgi transport
Rab GTPases and associated proteins
118419642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
EF-hand_5
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
118419642
NCBI-ProteinID:
XP_035682018
UniProt:
A0A9J7LFV9
LinkDB
All DBs
Position
7:21988199..22006093
Genome browser
AA seq
1548 aa
AA seq
DB search
MWVKPEEVLMANALWVTERANPFFLLQRRKGHGGGGLTGLLVGTLDTVLDNNTAPYRILH
QTPTSEVYWTVACAKSKKDVFKDWEWLEQNLMQILGEFEAEEDVTEFVRCKIESLLANVD
EESKEDNDTKRFREASAKFQKLFSMPEEEKLVNYYSCSYWKGRVPRQGWIYLSINHLCFY
SFLMGKEAKLIVRWTDVTQLDRSNSMVLPEGIKVCTRDGAHYFSMFVHPNETYALMEQLA
DMAMRQLLSEEGFEEDRELPRRLKKLTPKKVSLLKRDLDARAKSEAYRTLFRLPLSEKLD
GRTECTLWTPYNKRHIWGMLYVSPNYLCFMSRVSSEVSLIIPLRDVSLVEKIENSNSLLP
NAVHISTKSKTTFLFAQLGERDFLVERISDFLSKTVHRQYSSDSVSINSSGSGGSGTRLS
ASYSDTSGNGGDKETATGSDRISVSLGSSLGADKTSMSSSPAANQPLTMVFCRRNSNEIP
PKEKIKEHLWDIHFAEYGRGVSMYRTIKTHELILQGIPDSLRGELWLLFSGAINELQTHP
GYYQSLVEQSLGKYTIATDEIERDLHRSLPEHPAFQSDIGIAALRRVLTAYAFRNPNIGY
CQAMNIVTSVLLLYASEEEAFWLLVALCERLLPDYYNTKVVGALVDQGVFEDLTQEYLPQ
LYDRLDELGVISMISLSWFLTLFLSVMPFNSAVSIMDVFFFDGARVIFQLALTILDNNAT
SLLDCRDDGEAMQALGEYLDNVTNRDSTFPSISSSNFSSKSQESSVDVGDLIKESYQKYY
WIASDTIDKMRFKHRLKVIQGLEDSNKRNIVRSVSSDVPFSNEEMEELYDIFKEEYLSAC
YWGSGVYSDPWEKLDPSIPFYMQLKVNFEQFKTLFLALSPWGVGMHADAMALRAFRVMDV
NADGMVNFKEFAWCLYMMCKAELPDRLKLVYRLHMPPALLPTDHEDQEEEQEQDPEFISP
EAEPALEATSYFEEDLSPLHLPGNLPRHVQVVESLSSTPASEGTPPRTGTPDIEKDNGTS
SDSQFEEISMPDSTEGGSSDKEGVPFESSDETTKTVPKTQQAKADLRKEAQPSKTTEDSR
TAENLSSENLQTALKTKTADYRLSFVEDDEDYDFCADLDDKPKTQQGQDEKKAVQDQGKV
AAGDAVQGSAAEPTVQDSKDGTADGGVSSDSTSWELEGDVKSLEDSMQQVSIATERPGPI
TASSADSKDEEGPQGVVREAAEKEEDVFGEDGSTVLMQPAEDGQASTQSTPVRKCKQLSS
GGESDIHRFLRKYRREKEALNMGVKDLPRMDQPQFIQLWKTFYDIFREDPHEQELYHAIA
TVGKLLLELGEVGRYFTGSENNSPLTSPTAANKTVEESIPTKETSTTETPSSKTDTAGSA
PGQLDESANKTAEGQKMGTKDTPAKPEVVEESTCNQATDKTSPDSAIAMVSEESISSGLS
GLSATSTQVSEISHDSIGTTLQGSEVKQKPRGQLTPQGSKDLPTSPCSDWSITFEQFLAS
MLTESELVRYFEAPVDIFAVIDRYRKRKMIERQFSTSSFSSQSGSQTL
NT seq
4647 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtgaagccagaagaagtgctcatggcgaacgcgctgtgggtgacggagcgcgcc
aaccctttttttcttctccagcgtagaaagggccacggaggtggaggtctcactgggctc
cttgtggggacccttgacaccgtccttgataacaacaccgcgccttaccgaatcttacac
cagacaccgacatccgaggtctactggaccgtggcatgcgccaaatccaagaaggacgtc
ttcaaagactgggaatggctcgagcaaaacttgatgcagattctcggagagttcgaagcc
gaggaagacgtgaccgagttcgtcaggtgcaagatcgagagtttgctggcaaacgtggat
gaagagagcaaggaggacaacgacaccaagcgcttcagggaggcgtcggccaagttccag
aagcttttcagcatgcctgaggaggaaaagttggtgaactattactcttgtagctactgg
aaggggcgagtgcctcgtcaaggttggatctacctgagtataaatcacctttgcttctac
tcctttctgatggggaaggaggcgaagctgattgtccgctggacggatgtcacccagctg
gatcgcagcaacagcatggtgctaccggagggcatcaaggtctgcacgcgggacggcgct
cactatttctccatgttcgtgcaccccaacgagacctacgctctgatggagcagttggct
gacatggccatgagacaactgctgtcagaggaaggattcgaggaggatagggagctcccg
cgcaggctcaagaagctgacgccgaagaaggtgtcgctcttgaagagggacctggacgcc
agggcgaagagcgaggcgtaccggacgctgttcaggctcccgctgagcgagaagctggac
gggcgcaccgagtgcacgctgtggacgccctacaacaagcgccacatctggggcatgctg
tacgtctcgcccaactatctctgcttcatgagtcgcgtgagcagcgaggtgtcactcatc
atcccgctacgggacgtttctctcgtggaaaagatcgagaactccaacagcctcctgcct
aatgccgtgcacatctctaccaaaagcaagacgacattcctctttgcccagctgggcgaa
cgcgacttcctggtggaaaggatatcggacttcctctcgaagaccgttcaccgacagtac
agctcggacagcgtcagcatcaacagcagcgggagtggaggctccggaacacgattgtcc
gcgagttacagcgacaccagtggtaacggcggggataaagagactgctacaggctcggac
aggataagtgtcagccttggtagctctcttggagcagacaaaaccagcatgagcagttcc
ccagctgccaaccagcctctcaccatggtgttctgtaggaggaactccaatgaaatccca
cccaaggaaaagataaaggaacatctgtgggacatccactttgctgagtacgggaggggg
gtgtccatgtatcgcacaatcaagacacatgagctcattctgcaaggcatcccggacagt
ttgcggggagagctgtggctgctgttttccggtgctatcaacgagctccagacacatccg
gggtactaccagtcactggtggagcagagcctgggaaaatacaccatcgcgacggacgag
atcgaacgagacttgcaccgctccctcccagagcaccccgcattccagtcggacatcggc
atcgctgcgttgagacgtgttctcacagcgtacgccttcaggaaccccaacatcgggtac
tgccaggccatgaacatcgttacttcagtccttctcctgtatgcctcagaagaagaagcc
ttctggctccttgtcgctttgtgtgagaggctccttcctgactactacaacacaaaggtg
gttggtgcgttggtagaccaaggcgtgtttgaggacttaacccaagagtatctcccacag
ttgtacgacaggctagacgagcttggtgtcatcagcatgatctctctctcctggttcctt
acattgttcctcagcgtcatgcccttcaacagtgcggtcagcatcatggatgtctttttc
ttcgatggtgcacgtgtcatcttccagttggcgctgaccattctggacaacaacgccacc
agcctgctggactgcagggatgacggagaagccatgcaggcccttggggaatacctggac
aacgtcaccaacagggactctacattcccgtccatctccagcagcaacttctcctccaag
tcccaagagtcttccgtggacgtcggggacctgatcaaggagtcctaccagaagtactac
tggattgcctcggacaccatcgataagatgcgcttcaagcaccgtcttaaggtcatacag
ggtctggaggacagcaacaagaggaacatcgtgcgaagcgtcagctcggacgtgcccttc
tcaaacgaagagatggaggaactgtacgacatctttaaggaggagtatctcagcgcctgt
tactggggttccggggtgtacagtgacccttgggagaaactagacccatccataccattc
tacatgcaactcaaggtcaacttcgagcagttcaagaccctcttcttggcgctgtctcct
tggggggtcggcatgcacgccgacgccatggccctccgcgccttccgtgtcatggacgtc
aacgcagacgggatggtcaacttcaaggagtttgcctggtgcctctacatgatgtgtaaa
gcagagttaccagacaggctgaagctggtatacaggctgcacatgcctcctgcacttctg
cctacagatcacgaagaccaagaagaagaacaggagcaagatccggagttcatctctccc
gaagcagagccagctcttgaagccacttcttacttcgaggaagacctatcgcctctacat
ctcccggggaacctcccgagacacgtacaagtcgtggagagcctttcgtccactcccgcg
agtgaaggcacccctccccgtaccggtactccagatatagagaaggataacggaacgtcc
agtgactctcagttcgaagaaatcagcatgccagattctactgagggtggctcgtcagac
aaagagggagtcccgttcgaatcatcagatgagactacaaaaactgtaccaaaaacacag
caggctaaggcagatctacgtaaagaagcacagccgagtaagactactgaagacagcagg
acagccgagaatctgtcatctgaaaacctccagacagcactgaagacaaaaacagcagac
tacaggctcagctttgtggaagatgatgaagactatgacttctgcgcagatttggacgac
aaacccaaaacacagcaaggacaggacgaaaagaaagctgttcaggaccaaggaaaggtc
gcagcaggagatgctgtacagggcagtgctgctgaaccaactgtacaggacagcaaagat
ggtacagcagatggaggtgtcagcagtgacagcacatcatgggagctggaaggtgatgtc
aagtcacttgaagacagcatgcaacaggtttccatagcaacagagagaccagggccaatc
acagcatcctctgctgactccaaggatgaggagggtccacaaggggttgttagggaggct
gcagagaaagaagaggatgtgtttggggaagatgggtctactgtactcatgcagcctgca
gaggatggacaggccagcacacagagcactcccgtcaggaaatgtaaacaactgagctct
ggaggagagagtgacatccatcggttcctgaggaagtaccggagagagaaggaggcactg
aacatgggggtgaaggacctgcctaggatggaccagcctcagttcatccaactatggaag
actttctacgacatattccgtgaggacccccacgagcaggagttgtaccacgccatcgct
accgtggggaagctactgttggagctgggagaggtgggacgatatttcaccggcagtgag
aacaattcaccgctgacttctcccactgcagccaacaaaacagttgaagaatccattcca
acaaaagagacatcgacaacagagactccaagcagcaagactgatactgcaggcagtgca
cctggacaactcgacgaatcagccaacaagaccgctgaaggtcagaaaatgggaacaaaa
gacacccccgccaaaccagaggtagtggaagagtccacctgtaaccaggcgacggacaag
acgtcccccgacagtgcaatagcgatggttagcgaggaaagtatctcctctggcctatca
ggcctcagtgccacaagcacccaggtctcagaaatctcccatgattccataggcaccacc
ctacaagggtcagaggtcaaacagaagccaagaggtcagctgacccctcaggggtcaaag
gatttaccgacatccccttgcagtgattggtcgatcacgttcgaacagttcctagcctcg
atgctgacagagtcagagttagtgaggtatttcgaggcgccggtggatatttttgctgtc
attgataggtacaggaagaggaaaatgatagagagacagttcagtacttccagtttttca
agccagagtgggtcccaaacattgtag
DBGET
integrated database retrieval system
