Branchiostoma floridae (Florida lancelet): 118419656
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Entry
118419656 CDS
T01074
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04080
Neuroactive ligand-receptor interaction
bfo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118419656
04082 Neuroactive ligand signaling
118419656
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bfo04040
]
118419656
Ion channels [BR:
bfo04040
]
Ligand-gated channels
GABA-A
118419656
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF4956
Motif
Other DBs
NCBI-GeneID:
118419656
NCBI-ProteinID:
XP_035682048
UniProt:
A0A9J7LFX6
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Position
7:22705467..22753294
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AA seq
445 aa
AA seq
DB search
MSGTLCSRAIVCVVLFVQWKLSSSQLLNFTSVNSTEFPSKAPRSLQENITSILDELIDGY
DNRIRPGIGGGPTVVMTDIYVTSIGPVSEVDMEYTLDCFFRQTWQDTRLQFTGPPKELRL
NNVMLDKIWTPDTYFRNGKKAIAHTMTTPNKLFRIQEDGTVLYTMRLTIHAECPMMLENF
PMDTQICPLRFGSYGYPKEEIEFHWKYGDKKSVTISEEDRRLNQYELQRHEAGKELKISK
SGHYIIMTVDFYLKRNMGYFLIQTYLPCILIVVLSWVSFWINKESTPARVALGITTVLTM
TTLSTSARHSLPKVSYANAMDWFIAVCFAFVFASLVEYACVNYFSMRKPSSPPIRNVQDE
NEDYDNEGTSAGNGKGGAEVKEKTGCCSVFRGRWWPQVVKCMRNNILYRAESEDNVSNID
RLSRAMFPFTFGIFNVVYWLAYYIE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcaccctgtgctctcgtgcgatcgtctgcgttgttctgtttgtgcaatggaaa
ctaagctcatctcagttgctgaacttcacgagtgtcaactctacagagttcccgtccaaa
gcaccgaggtctctacaggagaacatcaccagcattctggatgaactgattgacgggtac
gacaacaggattcggccaggaataggaggtggacctacggttgtgatgacagatatctac
gtcacgagtattggaccggtctcagaagtggacatggagtacacgctggattgcttcttc
agacaaacttggcaggacacgcggctgcagttcacaggaccgccgaaggaactccgtctg
aacaacgtcatgttggacaagatctggacaccggacacctacttccgcaacggcaaaaag
gccatagcacataccatgactacgcctaacaaactcttccggatccaagaggacggaaca
gtactttataccatgagactgaccattcacgccgagtgtccgatgatgttggagaacttt
ccgatggacacccaaatctgtccgctacgctttggctcatatgggtaccctaaggaggag
atagagttccactggaagtacggggacaagaagtcggtcactatcagtgaggaagacagg
cgtctgaaccagtacgaactacaaagacatgaagccggcaaggagctgaaaatatccaaa
tccgggcactacatcatcatgaccgtagacttctatctgaagaggaacatgggatatttc
ctcatccagacctacctgccctgcatcctgatcgtggtactttcttgggtctccttctgg
atcaacaaggagtccactcctgcccgagtagccctaggtattacgactgtactgacgatg
acgacgctcagcaccagtgcgcggcactctctgcccaaggtgtcctacgctaacgccatg
gattggttcatcgccgtgtgtttcgccttcgtcttcgcctctctggtggagtacgcatgc
gtcaactacttctccatgaggaagccctcgtctcccccaatacggaacgttcaggacgaa
aacgaggattatgacaatgaaggcacgtccgccggaaacggaaagggaggggccgaggta
aaggagaagaccggatgttgcagtgtatttcggggccgctggtggcctcaggtggtgaag
tgcatgcgaaacaacatcctgtaccgagctgagtccgaggacaatgtgagcaacatcgat
agactctcacgggccatgtttccttttacattcggcatcttcaatgttgtctactggctt
gcctattacattgagtaa
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