Branchiostoma floridae (Florida lancelet): 118419764
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Entry
118419764 CDS
T01074
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog B-B-like
KO
K11267
sister chromatid cohesion protein PDS5
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bfo03036
]
118419764
03400 DNA repair and recombination proteins [BR:
bfo03400
]
118419764
Chromosome and associated proteins [BR:
bfo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
118419764
DNA repair and recombination proteins [BR:
bfo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
118419764
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
Cnd1
HEAT_2
TPR_TTI1_2nd_yeast
PI-TkoII_IV
At4g37920_C
YfjT_2
Motif
Other DBs
NCBI-GeneID:
118419764
NCBI-ProteinID:
XP_035682238
UniProt:
A0A9J7LI69
LinkDB
All DBs
Position
7:complement(7722658..7740790)
Genome browser
AA seq
960 aa
AA seq
DB search
MPSRGRPHLKVVYPEGVKELSEDLHKDELIRRLKVLAKTFADMDQDQEEEKQRYEPLALH
LASEHFLHHESKDVKLIVGCCIADIFRIYAPEAPYKDPIQLKEIFLFLVKQLRGLEDING
ALFKRYFYLLENLSWVKSFNICFELEDCGEIFNQLFETLFSIVHRGHSNKVRTFMLDMMS
PIITEGDSVSQDLLDIILMRIIEPQKSKLPEAYELARDLIKRTSQAIEPYIQTFFNNVLV
LGKTSESDASGRIYDLIYELNLIAPNVLLSVLPQLEFKLRSNDGDERLNVTRLLARMFSD
KESQLSSQNKPLWNCYLGRFKDVNVAVRVECVKFANKLLINHQNMMEEVTEQLKARCHDP
DESVRYEVVSSIIKAAKESLRNVSQELLSLVQDRMLDKKFKIRREANQGLALIYREHCTT
PGQEDEMIRWIKNKLLHVYYQTSPEDRLLVEHAVTHCLVPYTMDTKERMRRLFRLYATLD
DYAVKSLNEVFRSQHMLRNHMKQLLDLLEEDPEETEVEETKKMIASKTNLLARSLSEPSK
AQEQVKKFVDILGKDERIHGFMQTLVDPKCTCEKAPETMREIQKKIGHFGQKGPASPFYD
TVKNLLEKVSPLIIDPSAVDQLFKLLNDTMEGLGDEDLGDSGQERGLQLILMLSPIYPES
FQSEDIFGQLLSYLKKENPIVVDTALQIFSNTGAVIEENFTMIKSALLPVLQAKAKSGTP
RQAKHAIRCVNTIFPGVRDSIFNQIFEHLRKKLSFNSPNFLTALTSIGHLSLLAPALFSQ
QMKNFVAKFIVKDLLMQDRNEKKATTSSWCEDDQVSFETQAKIIALKLIVNWLLGMKNND
GNSCTSTFRLLHAMIKNKGDLMQKGKVSQPEQAHLRLAAGCAVLKLAQERVFAELLTLEQ
FQMVASLMNDKCLEVRQKFTNKLHKGLMRLRLPLEYLSIFSLAAREPHAGLRRQIKASTR
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgccttccagaggtcgacctcacctgaaggtggtgtacccagaaggtgtgaaggaactg
tcagaagatctgcataaggatgagctcatcaggaggctcaaggtcctggccaagacgttt
gcggacatggaccaggatcaggaggaggaaaagcagcgttacgagccgctggcgctccac
ctggcgtcggaacacttcctgcaccacgagagcaaggacgtgaagctgatcgtgggctgc
tgcatcgcggacatcttccgtatttatgctcccgaagcaccgtataaggaccccatacag
ctgaaggagattttcctgttccttgtgaagcagctgagaggtcttgaggacataaatgga
gctctgtttaagagatatttctatctcttagagaacctatcctgggtgaagtcgtttaac
atctgttttgaactggaggactgtggcgagatcttcaaccagctgtttgaaactctcttc
agtattgtgcaccgtggccactccaacaaggtgcgtaccttcatgttggacatgatgtct
cccatcattactgagggggactccgtgtcacaggacctgctggatatcatcctcatgcgc
atcattgagccacagaagagcaagctgcccgaggcctatgaactggctagggatttgatc
aaacggacttcccaagccatcgaaccttatatccagacattcttcaacaatgtccttgtt
ttggggaagacgtcggagagtgacgcgtccgggcggatctacgacctgatctacgagctg
aacctgatcgcgcccaacgtcctgctgtcggtcctgccgcagctggagttcaagctcagg
agcaatgatggtgacgagaggttgaatgtgacccgtctgctggctcgtatgttctcagac
aaggagtcacagctgtcctcacagaacaagcctctctggaactgctatctgggaagattt
aaggatgtgaacgtggcagttcgtgtggagtgtgtgaagtttgcaaacaagttactcatc
aatcaccagaacatgatggaggaagtaacagagcaactgaaggcacgttgccatgaccct
gatgagagtgtacgctacgaggtggtgtcgtccatcatcaaggcagccaaggagagcctg
cgcaacgtgtcccaggaactactgagtctggttcaggacaggatgttggacaagaagttt
aagatccgccgcgaggctaaccagggcctggcgctgatctaccgtgagcactgcaccaca
cccgggcaggaggatgagatgatccgatggatcaagaacaaactcttacatgtgtactac
cagaccagcccagaggacaggctgctagtagaacatgcggtgacccactgcctcgtccct
tacaccatggacaccaaggagagaatgagacgactcttcagactctacgccaccctggat
gactatgccgtcaagtcgttaaatgaagtgttccgtagccagcacatgctgcgaaaccac
atgaaacagctcttagatctcctggaggaagatcctgaagaaacggaggtggaagaaaca
aagaaaatgattgcttccaagaccaatcttcttgcaaggagcctgtcggaaccctcgaag
gcccaggagcaggtgaagaagtttgtggacatcctggggaaggatgagcgcatccacggc
ttcatgcagactctggtggaccccaaatgtacctgcgagaaggcaccagagactatgaga
gagattcagaagaagatcggccactttggtcagaagggtcccgccagtccgttttacgac
acagtgaagaacctgctggagaaggtgtctccgctgatcatcgacccgtcagcggtagat
cagctgttcaagctgctgaacgacaccatggaggggctgggggatgaggatctgggcgac
tctggtcaggagagaggcctgcagctcattctgatgctctctcctatttaccctgaatca
ttccagtctgaggacatcttcggccaactcctctcctacctgaagaaggaaaaccccata
gttgtggatacagccctacagatcttcagcaacactggggcagtcatagaggagaacttc
actatgatcaagtcagcacttctccccgtgttacaagccaaagcgaagagcggcacccca
cgccaggccaaacatgccatccgctgcgtcaacaccatcttccctggagtcagggacagc
atcttcaatcagatatttgagcacctgaggaagaagctgtcctttaactcgcccaacttc
ctgacggcgctgacgtccatcggccacctctcgctgctcgcacccgcactcttctcacag
cagatgaagaacttcgtggccaagttcatcgtcaaagacctcctgatgcaggacaggaat
gaaaagaaagcgaccacttcatcctggtgtgaggatgaccaggtgtcttttgagacacag
gcaaagattatagccctgaagctgatcgtgaactggctgctgggaatgaagaacaatgac
ggcaactcctgcacctccaccttcagactgctccatgccatgatcaagaacaagggggac
ctcatgcagaagggcaaagtcagccaaccggagcaggcccacctgcggttggcagccggc
tgtgctgtactgaagctggcccaggagagagtcttcgctgagctgctcaccctggaacag
ttccagatggtggcttcactcatgaatgacaaatgcctggaggttcgtcagaagttcacc
aacaagctgcacaagggcctgatgcggctgcggctgcccctggagtacctgtccatcttc
tccctggccgctcgtgagccgcacgccggcctgcgcagacagatcaaggccagcacaagg
taa
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