Branchiostoma floridae (Florida lancelet): 118419817
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Entry
118419817 CDS
T01074
Name
(RefSeq) transient-receptor-potential-like protein
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bfo04040
]
118419817
Ion channels [BR:
bfo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118419817
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
PKD_channel
Ank
Ank_3
Ank_4
YVC1_C
Motif
Other DBs
NCBI-GeneID:
118419817
NCBI-ProteinID:
XP_035682315
UniProt:
A0A9J7LIG1
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Position
7:complement(3706392..3725602)
Genome browser
AA seq
1081 aa
AA seq
DB search
MEPNRHEPVGKRESTSSRTSVDREAYGGGTGTASDVYTGHTGYGREGFTGHPGSGRDPTM
GCPGSGRDPTMGYPGSGRDPTMGYPGSGRDPTMGYPGSGRDVYMGHHGFGREGYLGHTGS
GRRLGYSMYDLAKKPAVSGFSLSLRLFKSTHKYTPKERMFLEAAEKGDKATLMRCLQPPS
PVNVNVTNMVGRSALTMAVDNENIEIVELLLGQPDIKIGNALLYAIREGVYRIVEMMVNH
PSITPNMLGEEWCNTIDPGEECFDYSPDISPVILAAQLNQFEILQLLLSQGANISKPHNL
TCECDSCKERIMADSLRYSLHRISTYRALASPAWISLTSTDPILTAFRLSWELFNLAQLE
NEFKDPYMELVEECRTYAVQLLDQCRSSEEVIAVLNQACEDDDSDEEEEEEGAKDDDDEE
KLSLNRLKLALKYEQKQFVSHPHCQQLLTTIWYESLPGWRKRNIFTKVFILMSLISLLPF
MAFYYILHPRSKVGRFMRNPFMKFLSQSGSFAVFLILLTMASPREENMTNRRGPPPSTVE
VLIVFYVAGMVWNECKQLWEEGLHSYVREWWNWMDFMMNSLYLATISLRLVAYVRITSGT
AGPKDLERSFWPPDDPTLISEGLFSVANVFSFFRIIYLFQANPHLGPLQISLGCMLIDIG
KFLSVFFLVLMSFAFGLNQLYGFYADTEECLSEGDACQKNPTEFLTLGSSFQALFWSLFG
LTPLTTLELKEGHRFVISVGSLLLGAYHIAAIIMLLNMLIAMMSTSFQEVENHADLEWKF
ARTKLWLGYFDEGSTLPPPYNIIITPKSMYYFIKAVRQKWPEWQDRMQTIRRSLSSRRDG
PPPPPAGAAQQRPVDSSTDPTESEEVQRPYTISSSCKGQVNQGMSMESLEMQQTPDCEKA
KPTEQGPSTDEIYQSVMQRLVRRYIHHYKQAQSTDGVSEDDLAEIKQDISSLRFELREDR
RKEAARGNMQIEQFKRDVCRMLKGTTPSGRVSPAPAHLPVGQLSHQPSLEMEEANMPLGM
EEIDLLRREITSSLRSDLYSVMRELLSDQRSVRFEGGGNPPAPPYQPASSQLYQTQLYTE
L
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atggagccaaaccgtcatgaacccgttggaaagagagagtccacgtcatcacgcacttcc
gtcgatagggaggcgtatgggggagggaccggaaccgcaagtgacgtatacaccgggcat
accggatatggaagagaggggttcacaggtcaccccggatccggaagggacccaactatg
gggtgccccggatccggaagggacccaactatggggtatcccggatccggaagagaccca
actatggggtaccccggatccggaagggacccaactatggggtaccccggatccggcaga
gatgtgtatatgggccatcacggatttgggagagaaggctacctcggccacaccggaagc
ggaagaagattgggttattccatgtacgatctggccaagaaacctgcagtttccggtttt
tccttgtccctcagactgttcaaatccacccacaagtacaccccaaaagagcggatgttc
ctcgaggcggctgagaagggagacaaggcgaccctgatgcggtgcctccagccgccgtcc
ccggtcaatgtcaacgtcaccaacatggtgggccgcagcgccctgaccatggccgtggac
aacgagaacatcgagatcgtcgagcttctgctgggacagcctgacatcaagatcggaaac
gcactgctgtacgccatccgggagggtgtgtaccggattgtggagatgatggtcaaccac
cccagcatcaccccaaacatgttgggtgaggagtggtgcaacacgatcgaccccggggag
gagtgtttcgactactcgcctgacatctctcccgtcatcctggctgcgcagctcaaccag
ttcgagatcttacagctgctactgtcacagggcgccaacatatccaagccgcacaacctg
acgtgcgaatgtgacagctgcaaggagcggatcatggctgatagcctgcggtactctctg
caccgcatcagtacgtaccgagccctggcctcccctgcctggatctccctcacctccaca
gaccccatcctcaccgccttccgcctcagctgggagctcttcaacctcgcacagctcgag
aacgagttcaaggacccatatatggagctggtggaggagtgccgaacgtacgccgtacag
ctgttggaccagtgccgcagctcggaggaggtcatcgccgtcctcaaccaggcttgtgaa
gatgacgacagcgacgaagaggaggaggaggaaggtgcaaaggatgacgatgatgaagaa
aagctttccctgaacaggctgaaactcgcgttgaaatatgaacagaagcagttcgtgtcc
catccgcactgccagcagctgctgaccaccatctggtacgagagcctgccgggatggcgc
aagcgcaacatcttcaccaaggtgttcatcctgatgtcgctcatcagcctgctgcccttc
atggccttctactacatcctccacccgcgcagcaaggtgggccgcttcatgaggaacccc
ttcatgaaatttctcagccagtccggttcgttcgcggtgttcctgatcctgctgaccatg
gcctctccccgggaagagaacatgaccaacaggcgcggcccgccgccatccaccgtggaa
gtcctcatcgtcttctacgtagcaggcatggtgtggaatgaatgcaaacagctgtgggag
gagggactacattcttacgtgcgagagtggtggaattggatggacttcatgatgaattca
ctctacctcgcaacaatatccctccgcctggtcgcctatgtccggatcacgtcaggaacg
gccggacccaaggatctagagcgcagtttctggccgccggacgaccccaccctcatctca
gagggacttttttctgtcgcaaatgtcttcagcttctttcgaataatatacctgtttcaa
gccaacccccacctcgggcccctacagatctccctaggctgcatgctcatcgacatcggc
aagttcctgtcggtgttcttcctggttctgatgtccttcgccttcggcctgaaccagctg
tacggcttctacgccgacacggaggagtgcctgagcgagggggacgcctgtcagaaaaac
ccgacagaatttctaaccctaggctcgtcattccaggccctgttctggtcgctattcggc
ctgacgcccctcaccacgctggagctgaaggagggacaccgcttcgtcatctccgtcggc
tcgctgctgctcggcgcctaccacatcgccgccatcatcatgctgctcaacatgctcatc
gccatgatgtccacatccttccaggaagtggagaatcatgcggacctggagtggaagttt
gccagaaccaagctgtggctggggtacttcgacgaaggctcgaccctgccaccgccgtac
aacattatcatcactccaaaatctatgtactactttatcaaggccgtgcggcagaagtgg
ccggagtggcaggaccggatgcagaccatcaggaggagtctgagttcccggcgggacgga
cccccacctccccccgcaggagccgcccagcagcgcccggtagactccagcacagacccc
acggagtcggaagaggtacaaaggccgtacactatcagctcgtcatgtaaagggcaagtg
aaccagggaatgtcaatggaaagcttagagatgcagcagactcctgactgtgagaaggca
aaaccgacagaacaggggcccagcacggacgagatttatcaatcagtgatgcagcggctg
gtacggcggtacatccaccactacaagcaggcgcagagcaccgacggtgtgagcgaggac
gacctggccgagatcaaacaggacatttcaagtctaaggtttgagcttcgggaggacagg
cggaaggaggctgcgcgcgggaacatgcagatcgagcagttcaagcgggatgtgtgccgg
atgctgaaggggaccactccgagcgggagggtctccccggccccggctcacctgcctgtc
gggcaactatcccatcaaccctcgctggagatggaggaggccaatatgccgctcggtatg
gaagaaatcgacttgttgcgccgagagatcacttccagtctgcggagtgatctgtactcg
gtgatgcgggaactactttccgaccagcggagtgttcggtttgaaggagggggtaatcca
ccggccccgccttaccagccggcctcatcacagctgtaccagacgcagttatacacggag
ctgtaa
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