Branchiostoma floridae (Florida lancelet): 118419858
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Entry
118419858 CDS
T01074
Name
(RefSeq) probable E3 ubiquitin-protein ligase DTX3
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
118419858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bfo04121
]
118419858
Enzymes [BR:
bfo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118419858
Ubiquitin system [BR:
bfo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118419858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_5
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-P11
zf-RING_4
zf-RING_10
TRAF3_RING
zf-C3HC4_4
Prok-RING_4
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
118419858
NCBI-ProteinID:
XP_035682408
UniProt:
A0A9J7LGL0
LinkDB
All DBs
Position
7:complement(24656342..24658381)
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AA seq
182 aa
AA seq
DB search
MCDFTDPKALSCNHKFCAECLATALKHASKCPICGLVVGRLRGDQPEGRMEYEVEKYSSL
PGYPGCGTIIIHYSIPSGIQGPEHPNPGHPYQGTSRKAYLPNNPEGKEVLTLLKEAWKNK
LVFTVGTSVTTGTSDAVTWNDIHHKTNRSGGPTSYGYPDHTYLGRVKEELAAKGITTRPS
TA
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgacttcaccgatccaaaggccctgtcctgcaaccacaagttctgcgcagaatgc
ctggcaactgccctgaagcatgcttccaaatgccccatatgcggcctcgtggtgggccgg
ttgaggggtgaccagcctgagggtaggatggagtatgaagtggagaagtacagcagtctt
cccgggtacccaggctgtggtaccatcatcattcactacagcataccgtctggaatacaa
ggaccagagcaccctaaccctggacacccttaccagggtacctccagaaaagcctacctg
ccaaacaaccccgaggggaaggaggtccttacactgctgaaggaggcgtggaagaacaag
ctggtcttcaccgttggtacgtctgtcacgactggtaccagcgatgccgtcacctggaac
gacattcatcacaaaaccaaccgcagtggaggtcccaccagttatgggtacccagatcac
acctacttgggcagagtgaaagaagaactggcagccaaaggcatcactacaagaccttca
actgcatag
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integrated database retrieval system
