Branchiostoma floridae (Florida lancelet): 118419930
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Entry
118419930 CDS
T01074
Name
(RefSeq) replication factor C subunit 3-like
KO
K10756
replication factor C subunit 3/5
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03030
DNA replication
bfo03410
Base excision repair
bfo03420
Nucleotide excision repair
bfo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
118419930
03410 Base excision repair
118419930
03420 Nucleotide excision repair
118419930
03430 Mismatch repair
118419930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bfo03032
]
118419930
03036 Chromosome and associated proteins [BR:
bfo03036
]
118419930
03400 DNA repair and recombination proteins [BR:
bfo03400
]
118419930
DNA replication proteins [BR:
bfo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
118419930
DNA Replication Termination Factors
ELG1-RFC complex
118419930
Chromosome and associated proteins [BR:
bfo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
118419930
DNA repair and recombination proteins [BR:
bfo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
118419930
Check point factors
HRAD17(Rad24)-RFC complex
118419930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA
AAA_22
AAA_16
AAA_2
T2SSE
ABC_tran
T4SS-DNA_transf
AAA_5
nSTAND1
Rep_fac_C
DUF87
Motif
Other DBs
NCBI-GeneID:
118419930
NCBI-ProteinID:
XP_035682492
UniProt:
A0A9J7LGM7
LinkDB
All DBs
Position
7:complement(4586445..4592915)
Genome browser
AA seq
356 aa
AA seq
DB search
MSLWVDKYRPTSLNKLSYHTEQAAQLKRLVQNGDFPHLLVFGPSGAGKKTRITCLLRELY
GAGVEKLRIEHHNFTTPSKKKIEITTIASNYHIEVCPSDAGVQDRVVVQELIKMVAQAQQ
LDSSTQREFKVVLLTEVDRLTKDAQHALRRTMEKYVTTCRLILCCESTSKVIPAIRSRCL
GVRVPAPSNQQICSILQTVCKKEGLTLPPELANRIADKSGRNLRRAILMLEACKVQQYPF
RPDQQVVEADWEVFLRETANAIVSQQSPRRLLEVRGRLYELLTHCIPPDVIIRGLLTELI
DSCDGQLKAEVTQWAAYYEHRLQLGSKSIYHLEAFVAKFMSIYKKFLDEGMAAMML
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagtctttgggtggacaagtaccggccgacttccctgaataaactgagctaccacaca
gaacaggcggcacagctgaaaagactggtgcagaatggtgacttcccccacctgttggtg
tttggtccgtcgggcgccggtaagaagacgcggatcacgtgtctgctgagggagctgtac
ggggcaggggtggagaaactcaggatcgaacaccacaacttcacgaccccctccaagaaa
aagattgagatcaccacaatcgccagtaactaccacatagaagtgtgtccaagtgatgca
ggtgttcaggaccgagttgttgtccaagaactcatcaagatggtggcgcaggcgcagcag
ctggactcctcaacacagcgagagttcaaagtggtcctcctgacggaggtggacaggctg
acgaaggatgcccagcatgccttgcggcgcaccatggagaagtatgtgacgacctgccgc
ctcatcctctgctgcgagtccaccagcaaggtcatccccgccatcaggagcaggtgtctc
ggggttcgagttccggcaccgtcaaaccaacagatctgcagtatcctccagacagtgtgt
aagaaggagggactgacgctgcccccggaactggccaatagaatcgctgacaagtccggc
cggaatctccgcagggccatcctgatgctggaggcctgcaaagtgcagcagtacccattc
cggcccgaccagcaggtagttgaggcagactgggaagtgttcctgagagagacggctaac
gccatcgtcagccagcagagtccccggagattgctggaggtgagaggtcgtctgtacgag
ctgctgacccactgcatccctcctgatgtcatcataaggggcctgctgacagagttgatt
gacagctgtgatggacagctgaaggcggaggtgacgcagtgggcggcttactatgaacat
cggctccagctgggctccaagtctatctaccacctggaggccttcgttgccaagttcatg
tctatctataagaagttcttggatgaaggaatggcggccatgatgttataa
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integrated database retrieval system
