Branchiostoma floridae (Florida lancelet): 118420011
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Entry
118420011 CDS
T01074
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bfo04040
]
118420011
04091 Lectins [BR:
bfo04091
]
118420011
Ion channels [BR:
bfo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118420011
Lectins [BR:
bfo04091
]
C-Type lectins
Others
118420011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
Pentaxin
PLAT
Laminin_G_3
GPS
Motif
Other DBs
NCBI-GeneID:
118420011
NCBI-ProteinID:
XP_035682608
UniProt:
A0A9J7LHZ1
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All DBs
Position
7:11060081..11136528
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AA seq
1375 aa
AA seq
DB search
MTELGTTEPSWKKNTIRTHQFNTTQGKSLHITVTPHLANVSVRLLLKQGQEPVRIDEFDR
NITLPLPDDADLYTLSLGQTETLTADRWTWFIPGSDVGDSVEYTYYLGVQHVPLTEGGDV
TPSVSPEYRGENFTLNYTVEIYSTQCLYFNEEIEDFRSDGCQPGPLTNTSLSHCRCDHLT
AFGSGFQFFIAPNKLNILKAFQTLNFKENPVVLIALSVVVGIYLLTVIWAWRKDRQDSKK
VGATILRGDQNGFNDHFYQIIVLTGSRSQSSTSARVFLTLIGEGGKSGPHELEDNNRTIF
REGGVDTFILPTSRHLGSLYAVHVWHDNTGPCPSWFLDKIILQDLSDGKKYSFLCQRWLA
VEEGDGRVDCLLSSATDKQISTLSQVFSSQTSKAFNDGHLWCSVVGRPAYSPFTRVQRVS
CCLSLLLCTMVTNIMFFGREADFSKPPPVDILGFKVQIPISWAQLMIGVQSCLIIFPINL
VIVEIFRHVASPPEKKAKDQNISSDSSTSSDVIDVEEIELQKVDKAWDFYRQPYSDNKMA
EDKRKGWILPWWCVFIAWFLVFASCFLSALFTILYGQEYGREKAEAWLFIFFTSFFTDLL
ILQPVKVVLLAIGLTLVLRKPHDDAENQSPTLDYDEVCAYLSTIKATPVKKCHEEPPDST
KLAEMRVRRFVEISMKGALYEFAFYFLFVLVLAVIANGPRDTGMFHMTQNLRQTMNNGDD
YSFKKINDVQSFWNFIRYTLTPALYGNQWYNGDSREPGGFMTDKTSYVVGPVRLRQLRVA
KDSSCKLAEPVEGIFLDCTNAYSYLTQDSSSYGMGWSETPHANASSLVQNETNPWVYRHS
ADIPVVGTHSTYWDGGYYVTLANTTPTAVLATVAQLEPSGWIDRYTRAVFIEMTIYNPHA
NLFSVLNLLTEFTTVGNAYPRVDITTVRLYRFQTIWAWVVVGFEGVFIIFTLYFAFRELD
YIVKLRSLYLKTFWGCVELSLVTLSLAEVGVMLYTLYIVLEFQSKQGTNTGPVERTFEKY
RRAAYWDQINTYVLGCLVSVGTLKLLHLLRFNKHVVLGADTIKKAAGPLSGFFLIFTLVF
IAFAMFAALVFCTTEEGFSPFVATLETMLTILLGKFYEMSDRDRIMGPLFTFTFITFFQW
ILITMVVAIIDVYSGYTGLYYRFSCPSNGCRLSIDSSEGSEQLYLDGYVLGDSQKIIFPG
PRDTDKHARMEATLPEDLTNFTLCVHMRSNMSSSNKISLLYVQNIYVLMADPPVWDGEWH
AICTTWRSSDGAWQLYADGALADSGSGFNVGGRVGRGGTWILGQDQDEVGGGFVAEQAFT
GELSEVNLWDRVLSPAEIGADWAAFCNYHGNVIDWETTRIAIFGETRREEYQCSK
NT seq
4128 nt
NT seq
+upstream
nt +downstream
nt
atgactgagctaggaacgacagaaccttcttggaagaagaacacaatacgtactcaccag
ttcaacacgactcaggggaagtccctgcacatcacggtgacgcctcacctggcaaatgtg
tctgtccgactgctcctgaagcaagggcaagaaccagtccggattgatgagttcgacagg
aatataacattaccgctaccagatgacgccgacctgtacaccttgtcgctgggccaaaca
gaaaccttgacagcagataggtggacttggttcatacctggaagtgacgtaggggattcc
gtggagtacacgtactacctaggggtgcagcacgtcccgctcactgaaggaggcgatgta
accccttcggtttctcctgagtatcgcggagagaacttcaccttgaactacacagttgaa
atctactccacccagtgtctctacttcaacgaggaaatagaagacttcagatcagacggc
tgtcagcccggtcctctcaccaacaccagtctgtcacactgtcggtgcgaccatctaaca
gcgttcgggtccggctttcaattcttcatcgcgcccaacaaactcaacatcctcaaggcg
tttcaaacactgaactttaaggagaacccagtggttctgatcgcgctcagcgttgtggtt
gggatctacctcctcactgtgatctgggcctggcggaaagacagacaagattcaaagaag
gttggggcgacgattcttcgcggagatcagaacggtttcaacgatcacttctaccagatc
atagttctgactggatcgaggtctcaatcctccacatctgccagggtctttttgacgctg
attggagaggggggcaagtctggcccgcatgaactcgaggacaataaccgcacgatcttc
agggagggaggagtggacactttcatcttgccgactagtcgccatcttggatccttgtac
gccgtgcacgtgtggcacgacaacacaggaccttgtccttcatggtttctggacaaaatc
attctgcaagatcttagcgacggcaagaagtactctttcctgtgccagagatggttagct
gtggaagaaggtgatggaagggtagactgcttgctctcgtcagccaccgacaaacaaata
tcaacccttagccaagtcttcagttcacagacatccaaggccttcaatgatggccacctg
tggtgctcagtggtgggacggcctgcctacagccccttcacccgtgtccagcgcgtgtcc
tgctgcctgtcattgctgctctgcaccatggtcaccaacatcatgttctttggccgggaa
gctgacttcagcaaacctcctccagtcgacatccttggttttaaagtgcagatcccgata
tcatgggctcagctcatgatcggcgtacaaagttgcctcatcattttccccatcaacctt
gtcatagtggagatattccgccatgttgcatctcccccagagaagaaagccaaagatcaa
aatatttcaagtgattcttcaacgtcttcggatgtcattgatgttgaagagatcgagctt
caaaaggttgacaaggcctgggacttttacaggcaaccatacagcgataacaagatggct
gaggacaagagaaaaggatggattcttccgtggtggtgcgttttcatagcctggttcctg
gtttttgccagctgtttcctttctgccctgttcaccatcctgtacgggcaagagtacggc
cgggagaaggctgaagcctggctcttcatcttcttcacgtccttcttcacggatctcctc
atcctgcagcccgtgaaggtggttctgctggcaatcgggcttacacttgtgctgaggaaa
cctcatgacgatgcagaaaaccagtcgccaacgctagactacgacgaagtgtgcgcctac
ctgtctaccatcaaggcgactcctgtgaagaaatgccacgaagaaccaccggactcgacc
aagctagctgaaatgcgggtccgccgttttgtcgagatcagcatgaagggcgccctctac
gagtttgcgttttacttcctgttcgtcctggtgttagcggtcattgccaacggaccacgt
gacaccggcatgttccacatgactcagaatcttcggcaaactatgaacaatggagatgat
tattcttttaaaaagataaacgacgttcagagcttttggaactttatacgatacacgctg
actcctgcgttatacggcaaccagtggtacaacggtgacagcagggaacctggtggattt
atgacggacaagacgtcatatgtagttggacctgtcagactaaggcagctgagggtggcc
aaagatagttcatgcaagttggccgagccagttgaaggtatcttcctggactgcaccaat
gcgtattcctacttgacccaagacagcagcagctatgggatgggttggtcggagacacct
cacgcaaatgcaagttcactggtgcaaaatgaaaccaatccttgggtgtaccgtcattct
gcagatatcccagtagtaggaacacactccacctattgggatgggggctactacgttaca
ctcgccaacaccacgcccaccgccgtcctcgccaccgtggcacagctggagcccagcggc
tggatcgatcggtacacccgagccgttttcatcgagatgacgatctacaatccccacgcc
aacctgttctccgtgctgaatctgctgactgagtttactaccgtagggaacgcctatccc
cgtgtggacatcacgacagtccgtctctaccgcttccagaccatctgggcttgggttgtg
gtcggcttcgaaggagtcttcatcatcttcaccttgtacttcgctttcagggaattggac
tatatcgtgaagctacggagcttgtacttgaagacgttctggggctgtgtagagctgagt
ttggtgaccctgtctctagcagaggtcggggtcatgctgtacacattgtacatcgtcctc
gagttccagtcaaagcaaggaacaaacacgggaccagttgagagaacatttgagaagtac
cgcagggctgcgtactgggaccagatcaacacgtacgtgctgggctgcttggtttctgtg
ggaacactcaaactgctgcacctcctgcggttcaacaaacacgttgttctcggcgcagac
accataaagaaggcagccgggccactatccgggttcttcttgatttttaccctagtattt
atcgcttttgcgatgtttgccgctctcgtcttctgcactacggaggaaggattttcgccc
ttcgtcgccacgctggaaacgatgctcacgatcttgctgggaaagttctatgagatgtca
gaccgggacaggatcatgggaccgctcttcaccttcacgttcatcacgttcttccagtgg
atccttatcaccatggttgttgctatcattgacgtctacagtggctatactgggctgtac
taccgtttttcctgtcccagtaacggttgccggttgtccattgactcctcggagggcagc
gaacaactctatctagatggttacgtactaggggactcacagaagatcatcttccctggc
ccaagagacactgataaacatgccaggatggaggcaacattgcctgaggacctaacgaac
tttactctatgtgtgcacatgcgctccaacatgtcctccagcaacaaaatcagcttgtta
tacgtacaaaacatatatgtgctaatggcagacccacctgtgtgggatggtgagtggcac
gctatatgtactacctggcgcagcagtgatggagcttggcaactctacgctgacggcgcg
ctggcggactctggctccgggtttaacgtgggagggagagtgggcagaggcggcacatgg
atcctgggacaggatcaggacgaagttggcggaggattcgtcgcagaacaagcgttcacc
ggtgaactgtcggaagtgaacctctgggaccgcgtgctgtctccagctgaaataggagcg
gactgggcggcgttctgtaattaccatggcaacgtcattgactgggagacaactcgcatc
gcaatcttcggagagaccaggagggaagagtatcaatgcagtaagtag
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integrated database retrieval system
